Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01148
Gene name
Locationscaffold_01:4193566..4194839
Strand+
Gene length (bp)1273
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 57 79 22
3 99 121 22
4 133 155 22
5 178 200 22
6 212 234 22
7 249 271 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01148
MGWVRAATPEVEAQSQYGTIIAICIVLSLLSVSTVSCRLWIRAAARGLAGDDWMAALSMVFALAYSGLCIAQTKY
GLGLPIKLRPKPNIIPYTRVNFAGRPIYQLGISFFKVALCISYLRLLKGTDQRTYRRIVWLTIIFIFLAHLGCTL
SLIFACTPVAKSWNPLMNGSCLPPGPSFTGYAIVTIVSDIVVALLPVPVLLKLNVRLEKKIGLIAIFMLGLFTTL
CSVMRYTQINRIQYGDGNSTMLVLWGTIEFNVGNMVSSLPFLAPVCMKKAKDYRSKYSGGSGGGSHGLSRRKNTD
RFKLSDVSNDKMAFALPDRSASHHHAPSTPSTPSTSSTSSTKAHKGHRSIVKSVTYTVKVDKEAADDDDDGYHDA
VSNV*
Coding >Ophcf2|01148
ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAATCTCAATACGGCACCATCATCGCCATCTGCATC
GTCCTCTCACTCCTCTCCGTCAGCACCGTCAGCTGCCGTCTCTGGATCCGCGCCGCCGCTCGCGGTCTCGCCGGA
GATGACTGGATGGCTGCTCTATCCATGGTCTTTGCCCTCGCCTACTCCGGACTCTGCATCGCCCAGACAAAGTAC
GGTCTCGGTCTTCCCATAAAACTCCGTCCCAAGCCGAATATCATTCCCTACACGCGCGTCAACTTCGCCGGACGT
CCCATCTACCAGCTCGGCATATCATTCTTTAAAGTCGCCCTCTGCATAAGCTACCTCCGCCTCCTCAAGGGCACC
GACCAACGGACCTACCGCCGCATCGTCTGGCTAACCATCATCTTCATCTTTCTCGCCCATCTTGGCTGCACGCTC
TCCCTCATCTTCGCCTGCACCCCCGTCGCCAAGTCATGGAATCCGCTCATGAACGGCTCGTGTCTGCCTCCCGGG
CCGTCGTTTACCGGCTACGCCATCGTCACCATCGTCTCAGACATCGTCGTCGCTTTGCTGCCCGTCCCCGTCTTG
CTCAAGCTCAACGTCCGGCTGGAGAAGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACCCTC
TGTTCCGTCATGCGCTACACCCAGATCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGG
GGTACCATCGAGTTCAACGTCGGCAACATGGTCTCATCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCC
AAGGACTACCGGTCTAAGTACTCCGGTGGCAGCGGTGGCGGTTCCCACGGCCTGAGCCGCCGCAAGAACACGGAC
CGCTTCAAGCTGAGCGACGTCAGCAACGACAAGATGGCCTTTGCCCTGCCCGACAGATCCGCCAGCCATCATCAC
GCCCCCAGCACCCCCAGCACCCCCAGCACCTCCAGCACCTCCAGCACCAAGGCGCACAAGGGCCACCGGTCCATC
GTAAAGTCCGTCACCTACACCGTCAAGGTCGACAAGGAGGCCGCCGACGACGACGACGACGGCTATCATGACGCC
GTCTCTAACGTGTGA
Transcript >Ophcf2|01148
ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAATCTCAATACGGCACCATCATCGCCATCTGCATC
GTCCTCTCACTCCTCTCCGTCAGCACCGTCAGCTGCCGTCTCTGGATCCGCGCCGCCGCTCGCGGTCTCGCCGGA
GATGACTGGATGGCTGCTCTATCCATGGTCTTTGCCCTCGCCTACTCCGGACTCTGCATCGCCCAGACAAAGTAC
GGTCTCGGTCTTCCCATAAAACTCCGTCCCAAGCCGAATATCATTCCCTACACGCGCGTCAACTTCGCCGGACGT
CCCATCTACCAGCTCGGCATATCATTCTTTAAAGTCGCCCTCTGCATAAGCTACCTCCGCCTCCTCAAGGGCACC
GACCAACGGACCTACCGCCGCATCGTCTGGCTAACCATCATCTTCATCTTTCTCGCCCATCTTGGCTGCACGCTC
TCCCTCATCTTCGCCTGCACCCCCGTCGCCAAGTCATGGAATCCGCTCATGAACGGCTCGTGTCTGCCTCCCGGG
CCGTCGTTTACCGGCTACGCCATCGTCACCATCGTCTCAGACATCGTCGTCGCTTTGCTGCCCGTCCCCGTCTTG
CTCAAGCTCAACGTCCGGCTGGAGAAGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACCCTC
TGTTCCGTCATGCGCTACACCCAGATCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGG
GGTACCATCGAGTTCAACGTCGGCAACATGGTCTCATCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCC
AAGGACTACCGGTCTAAGTACTCCGGTGGCAGCGGTGGCGGTTCCCACGGCCTGAGCCGCCGCAAGAACACGGAC
CGCTTCAAGCTGAGCGACGTCAGCAACGACAAGATGGCCTTTGCCCTGCCCGACAGATCCGCCAGCCATCATCAC
GCCCCCAGCACCCCCAGCACCCCCAGCACCTCCAGCACCTCCAGCACCAAGGCGCACAAGGGCCACCGGTCCATC
GTAAAGTCCGTCACCTACACCGTCAAGGTCGACAAGGAGGCCGCCGACGACGACGACGACGGCTATCATGACGCC
GTCTCTAACGTGTGA
Gene >Ophcf2|01148
ATGGGCTGGGTCCGCGCCGCAACCCCCGAAGTCGAAGCCCAATCTCAATACGGCACCATCATCGCCATCTGCATC
GTCCTCTCACTCCTCTCCGTCAGCACCGTCAGCTGCCGTCTCTGGATCCGCGCCGCCGCTCGCGGTCTCGCCGGA
GATGACTGGATGGCTGCTCTATCCATGGTCTTTGCCCTCGCCTACTCCGGACTCTGCATCGCCCGTACGTGTTTC
CCTTCTGCTGTTGTTCTGTCGATGAGTTGACTGACACGCACCAGAGACAAAGTACGGTCTCGGTCTTCCCATAAA
ACTCCGTCCCAAGCCGAATATCATTCCCTACACGCGCGTCAACTTCGCCGGACGTCCCATCTACCAGCTCGGCAT
ATCATTCTTTAAAGTCGCCCTCTGCATAAGCTACCTCCGCCTCCTCAAGGGCACCGACCAACGGACCTACCGCCG
CATCGTCTGGCTAACCATCATCTTCATCTTTCTCGCCCATCTTGGCTGCACGCTCTCCCTCATCTTCGCCTGCAC
CCCCGTCGCCAAGTCATGGAATCCGCTCATGAACGGCTCGTGTCTGCCTCCCGGGCCGTCGTTTACCGGCTACGC
CATCGTCACCATCGTCTCAGACATCGTCGTCGCTTTGCTGCCCGTCCCCGTCTTGCTCAAGCTCAACGTCCGGCT
GGAGAAGAAGATTGGCCTCATCGCCATCTTCATGCTCGGCCTCTTCACCACCCTCTGTTCCGTCATGCGCTACAC
CCAGATCAACCGCATCCAGTACGGAGACGGCAACTCCACCATGCTCGTCCTCTGGGGTACCATCGAGTTCAACGT
CGGCGTATGTTCTTCCCCTCTCGTCTTCCCCCTTAAGAAAGCCCTTAAGAAAGCCCTCCATGCTGACATGGTGCG
TCTGCAGAACATGGTCTCATCCCTCCCCTTCCTGGCCCCCGTCTGCATGAAAAAGGCCAAGGACTACCGGTCTAA
GTACTCCGGTGGCAGCGGTGGCGGTTCCCACGGCCTGAGCCGCCGCAAGAACACGGACCGCTTCAAGCTGAGCGA
CGTCAGCAACGACAAGATGGCCTTTGCCCTGCCCGACAGATCCGCCAGCCATCATCACGCCCCCAGCACCCCCAG
CACCCCCAGCACCTCCAGCACCTCCAGCACCAAGGCGCACAAGGGCCACCGGTCCATCGTAAAGTCCGTCACCTA
CACCGTCAAGGTCGACAAGGAGGCCGCCGACGACGACGACGACGGCTATCATGACGCCGTCTCTAACGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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