© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01145 |
| Gene name | |
| Location | scaffold_01:4184045..4186351 |
| Strand | + |
| Gene length (bp) | 2306 |
| Transcript length (bp) | 1773 |
| Coding sequence length (bp) | 1773 |
| Protein length (aa) | 591 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01293 | PEPCK_ATP | Phosphoenolpyruvate carboxykinase | 4.4E-216 | 76 | 541 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0006094 | gluconeogenesis | Yes |
| GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | Yes |
| GO:0005488 | binding | No |
| GO:0004611 | phosphoenolpyruvate carboxykinase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0046364 | monosaccharide biosynthetic process | No |
| GO:0044283 | small molecule biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016051 | carbohydrate biosynthetic process | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0008152 | metabolic process | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016831 | carboxy-lyase activity | No |
| GO:0019319 | hexose biosynthetic process | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0016829 | lyase activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0008150 | biological_process | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0006006 | glucose metabolic process | No |
| GO:0005996 | monosaccharide metabolic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0016830 | carbon-carbon lyase activity | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0019318 | hexose metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01145 MADPVNRVVSPYPDPSVKGPKSQIQASRGPSSNNMITNTVNKTALHPGGVQPHGNHTDLEEELHEIAHIDYDRVA IIPNPSVAALYEDALVYETGTAITSSGALTAYSGKKTGRSPMDKRVVKESSSEHDIWWGPVNKPMSPEVWKINRE RAVDYLNTRNRIYVVDGYAGWDEKYRIRVRVICARAYHALFMRNMLIRPPREELEHFHPDYTIYNAGSFPANRYT EGMTSATSVAINFADKEMVILGTEYAGEMKKGVFTVLFYEMPIKHNVLTLHSSANEGKNGDVTLFFGLSGTGKTT LSADPNRALIGDDEHCWSDRGVFNIEGGCYAKCIGLSAEKEPDIFNAIRYGSVLENVVFDPDTREVDYDDSTLTE NTRCAYPIEYIGNAKIPCLSPSMPSNIILLTCDARGVLPPISKLDRAQTMFHFISGYTSKMAGTEDGVTEPQATF SSCFAQPFLALHPMRYAKMLADKIEQHKANAWLLNTGWVGAGFAQGGKRCPLKYTRAILDAIHSGELAKVQYETY EVFNLQVPTSCPNVPPELLNPRKAWTAGTDSFHTEVVKLGRLFRENFVKYESEATEEVVKAGPVV* |
| Coding | >Ophcf2|01145 ATGGCTGATCCCGTCAACCGCGTCGTCTCTCCCTATCCCGATCCCTCTGTCAAAGGCCCAAAGTCGCAGATTCAG GCTAGCAGAGGTCCCTCGTCCAACAACATGATTACCAACACCGTCAATAAGACCGCCCTGCACCCCGGCGGCGTC CAGCCTCATGGCAACCATACCGATCTCGAGGAGGAGCTTCACGAGATTGCCCACATCGACTACGACCGCGTTGCC ATTATCCCAAACCCCTCGGTCGCGGCCCTGTACGAAGATGCGCTCGTCTACGAGACGGGCACGGCCATTACCTCT AGCGGTGCCTTGACGGCTTATTCGGGCAAGAAGACGGGTCGATCGCCAATGGACAAGCGCGTCGTCAAGGAGTCG TCGTCGGAACACGACATCTGGTGGGGTCCCGTCAATAAGCCCATGAGTCCCGAGGTGTGGAAGATCAACCGCGAA CGGGCCGTCGACTATCTCAACACGCGGAACCGCATCTACGTCGTCGACGGATATGCCGGATGGGACGAGAAATAC CGCATCCGCGTCCGCGTCATCTGTGCTCGCGCCTATCATGCCCTCTTCATGCGCAACATGCTCATCCGTCCGCCC CGTGAGGAGCTCGAGCACTTCCATCCCGACTACACCATCTACAATGCCGGCTCCTTTCCCGCCAACCGCTACACC GAGGGCATGACGTCGGCAACGTCGGTGGCCATCAACTTTGCCGACAAGGAAATGGTCATCCTCGGCACAGAGTAC GCCGGCGAGATGAAAAAGGGCGTCTTCACCGTCCTCTTTTACGAGATGCCCATCAAGCACAACGTCCTGACGCTG CACTCGTCGGCCAATGAGGGCAAGAATGGCGACGTCACCCTCTTCTTCGGCCTGTCTGGCACTGGAAAGACGACG CTGTCGGCCGACCCCAACCGCGCCCTCATTGGCGACGACGAGCACTGCTGGAGCGACCGCGGCGTCTTCAACATT GAAGGTGGCTGCTACGCCAAGTGCATCGGCCTGTCTGCCGAGAAGGAGCCCGACATCTTCAACGCCATCCGGTAC GGATCCGTGCTTGAGAACGTCGTCTTCGACCCGGACACGCGTGAGGTCGACTATGACGATTCGACCCTGACGGAG AATACGCGCTGTGCCTATCCCATCGAGTACATCGGCAACGCCAAGATCCCCTGCCTGTCCCCCAGTATGCCCTCC AACATCATCCTCCTCACGTGCGACGCCCGCGGCGTGCTGCCTCCCATCTCGAAGCTCGACCGGGCCCAGACCATG TTCCACTTCATCTCGGGCTACACGTCCAAGATGGCCGGCACTGAGGACGGCGTGACGGAGCCCCAGGCCACGTTT TCGTCATGCTTCGCCCAGCCCTTCCTGGCCCTGCACCCGATGCGGTACGCCAAGATGCTGGCCGACAAGATCGAG CAACACAAGGCCAACGCCTGGCTGCTCAACACGGGCTGGGTCGGCGCCGGCTTCGCACAGGGAGGCAAGCGCTGT CCGCTCAAGTACACGCGCGCCATCCTCGACGCCATCCATTCGGGCGAGCTGGCCAAGGTGCAGTACGAGACGTAC GAAGTCTTCAACCTACAGGTGCCCACGTCGTGCCCCAACGTGCCGCCGGAGCTGCTCAACCCGCGCAAGGCGTGG ACGGCTGGCACCGACAGCTTCCATACCGAAGTCGTCAAGCTCGGCCGTCTTTTCCGCGAGAATTTCGTCAAGTAC GAGAGCGAGGCCACCGAGGAAGTCGTCAAGGCCGGGCCGGTTGTCTGA |
| Transcript | >Ophcf2|01145 ATGGCTGATCCCGTCAACCGCGTCGTCTCTCCCTATCCCGATCCCTCTGTCAAAGGCCCAAAGTCGCAGATTCAG GCTAGCAGAGGTCCCTCGTCCAACAACATGATTACCAACACCGTCAATAAGACCGCCCTGCACCCCGGCGGCGTC CAGCCTCATGGCAACCATACCGATCTCGAGGAGGAGCTTCACGAGATTGCCCACATCGACTACGACCGCGTTGCC ATTATCCCAAACCCCTCGGTCGCGGCCCTGTACGAAGATGCGCTCGTCTACGAGACGGGCACGGCCATTACCTCT AGCGGTGCCTTGACGGCTTATTCGGGCAAGAAGACGGGTCGATCGCCAATGGACAAGCGCGTCGTCAAGGAGTCG TCGTCGGAACACGACATCTGGTGGGGTCCCGTCAATAAGCCCATGAGTCCCGAGGTGTGGAAGATCAACCGCGAA CGGGCCGTCGACTATCTCAACACGCGGAACCGCATCTACGTCGTCGACGGATATGCCGGATGGGACGAGAAATAC CGCATCCGCGTCCGCGTCATCTGTGCTCGCGCCTATCATGCCCTCTTCATGCGCAACATGCTCATCCGTCCGCCC CGTGAGGAGCTCGAGCACTTCCATCCCGACTACACCATCTACAATGCCGGCTCCTTTCCCGCCAACCGCTACACC GAGGGCATGACGTCGGCAACGTCGGTGGCCATCAACTTTGCCGACAAGGAAATGGTCATCCTCGGCACAGAGTAC GCCGGCGAGATGAAAAAGGGCGTCTTCACCGTCCTCTTTTACGAGATGCCCATCAAGCACAACGTCCTGACGCTG CACTCGTCGGCCAATGAGGGCAAGAATGGCGACGTCACCCTCTTCTTCGGCCTGTCTGGCACTGGAAAGACGACG CTGTCGGCCGACCCCAACCGCGCCCTCATTGGCGACGACGAGCACTGCTGGAGCGACCGCGGCGTCTTCAACATT GAAGGTGGCTGCTACGCCAAGTGCATCGGCCTGTCTGCCGAGAAGGAGCCCGACATCTTCAACGCCATCCGGTAC GGATCCGTGCTTGAGAACGTCGTCTTCGACCCGGACACGCGTGAGGTCGACTATGACGATTCGACCCTGACGGAG AATACGCGCTGTGCCTATCCCATCGAGTACATCGGCAACGCCAAGATCCCCTGCCTGTCCCCCAGTATGCCCTCC AACATCATCCTCCTCACGTGCGACGCCCGCGGCGTGCTGCCTCCCATCTCGAAGCTCGACCGGGCCCAGACCATG TTCCACTTCATCTCGGGCTACACGTCCAAGATGGCCGGCACTGAGGACGGCGTGACGGAGCCCCAGGCCACGTTT TCGTCATGCTTCGCCCAGCCCTTCCTGGCCCTGCACCCGATGCGGTACGCCAAGATGCTGGCCGACAAGATCGAG CAACACAAGGCCAACGCCTGGCTGCTCAACACGGGCTGGGTCGGCGCCGGCTTCGCACAGGGAGGCAAGCGCTGT CCGCTCAAGTACACGCGCGCCATCCTCGACGCCATCCATTCGGGCGAGCTGGCCAAGGTGCAGTACGAGACGTAC GAAGTCTTCAACCTACAGGTGCCCACGTCGTGCCCCAACGTGCCGCCGGAGCTGCTCAACCCGCGCAAGGCGTGG ACGGCTGGCACCGACAGCTTCCATACCGAAGTCGTCAAGCTCGGCCGTCTTTTCCGCGAGAATTTCGTCAAGTAC GAGAGCGAGGCCACCGAGGAAGTCGTCAAGGCCGGGCCGGTTGTCTGA |
| Gene | >Ophcf2|01145 ATGGCTGATCCCGTCAACCGCGTCGTCTCTCCCTATCCCGATCCCTCTGTCAAAGGCCCAAAGTCGCAGATTCAG GCTAGCAGAGGTCCCTCGTCCAACAACAGTTTGGTTGCCCCGACCTGCTTTTGCTTTCGTCTCTGACGGGACGGC AGTGATTACCAACACCGTCAATAAGACCGCCCTGCACCCCGGCGGCGTCCAGTGAGCGCTGACCGTCGGTTCCTC TTGTAACGTTGTTGGTGAACTGACCGAGACGCCCTGTCCAGGCCTCATGGCAACCATACCGATCTCGGTGCCTAG CCTCGCGTTCCCCGGTCTGTCTCTCATCCGCCCGCTGACGTCGGTCTCGCAGAGGAGGAGCTTCACGAGATTGCC CACATCGACTACGACCGCGTTGCCATTGTACGTGGCCGCACCCTCGCTATCGGCGTCTGCAGCTAACCGTGGCTG GCCTGCAGATCCCAAACCCCTCGGTCGCGGCCCTGTACGAAGATGCGCTCGTCTACGAGACGGGCACGGCCATTA CCTCTAGCGGTGCCTTGACGGCTTATTCGGGCAAGAAGACGGGTCGATCGCCAATGGACAAGCGCGTCGTCAAGG AGTCGTCGTCGGAACACGACATCTGGTCCGTCCCCGTCCACTGCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTCT CTCTCTCTCTCTCTCCCCTCCTCGTCCTGATGTGGCTGACAGGGCTTGATTCCCGCAGGTGGGGTCCCGTCAATA AGCCCATGAGTCCCGAGGTAAGAAACCCGTCTCATCCCTCCCGTTCCATTGCCGCCTGTTCCCTGTCAGCCTCCC GCCTCTGCATCCCGATCCGGCTTCCCCCCCCCAGGCTGGAAATCTGCAGTGCTGACGCAACTGTTTCAAAGGTGT GGAAGATCAACCGCGAACGGGCCGTCGACTATCTCAACACGCGGAACCGCATCTACGTCGTCGACGGATATGCCG GATGGGACGAGAAATACCGCATCCGCGTCCGCGTCATCTGTGCTCGCGCCTATCATGCCCTCTTCATGCGCAACA TGCTCATCCGTCCGCCCCGTGAGGAGCTCGAGCACTTCCATCCCGACTACACCATCTACAATGCCGGCTCCTTTC CCGCCAACCGCTACACCGAGGGCATGACGTCGGCAACGTCGGTGGCCATCAACTTTGCCGACAAGGAAATGGTCA TCCTCGGCACAGAGTACGCCGGCGAGATGAAAAAGGGCGTCTTCACCGTCCTCTTTTACGAGATGCCCATCAAGC ACAACGTCCTGACGCTGCACTCGTCGGCCAATGAGGGCAAGAATGGCGACGTCACCCTCTTCTTCGGCCTGTCTG GCACTGGAAAGACGACGCTGTCGGCCGACCCCAACCGCGCCCTCATTGGCGACGACGAGCACTGCTGGAGCGACC GCGGCGTCTTCAACATTGAAGGTGGCTGCTACGCCAAGTGCATCGGCCTGTCTGCCGAGAAGGAGCCCGACATCT TCAACGCCATCCGGTACGGATCCGTGCTTGAGAACGTCGTCTTCGACCCGGACACGCGTGAGGTCGACTATGACG ATTCGACCCTGACGGAGAATACGCGCTGGTGCGTCTCCAATCGTCTGCCCTCCGCTCGCTCGCTCTCTCGGCTAA TCGCTTCCGTCGCTTCCAGTGCCTATCCCATCGAGTACATCGGCAACGCCAAGATCCCCTGCCTGTCCCCCAGTA TGCCCTCCAACATCATCCTCCTCACGTGCGACGCCCGCGGCGTGCTGCCTCCCATCTCGAAGCTCGACCGGGCCC AGACCATGTTCCACTTCATCTCGGGCTACACGTCCAAGATGGCCGGCACTGAGGACGGCGTGACGGAGCCCCAGG CCACGTTTTCGTCATGCTTCGCCCAGCCCTTCCTGGCCCTGCACCCGATGCGGTACGCCAAGATGCTGGCCGACA AGATCGAGCAACACAAGGCCAACGCCTGGCTGCTCAACACGGGCTGGGTCGGCGCCGGCTTCGCACAGGGAGGCA AGCGCTGTCCGCTCAAGTACACGCGCGCCATCCTCGACGCCATCCATTCGGGCGAGCTGGCCAAGGTGCAGTACG AGACGTACGAAGTCTTCAACCTACAGGTGCCCACGTCGTGCCCCAACGTGCCGCCGGAGCTGCTCAACCCGCGCA AGGCGTGGACGGCTGGCACCGACAGCTTCCATACCGAAGTCGTCAAGCTCGGCCGTCTTTTCCGCGAGAATTTCG TCAAGTACGAGAGCGAGGCCACCGAGGAAGTCGTCAAGGCCGGGCCGGTTGTCTGA |