© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01142 |
| Gene name | |
| Location | scaffold_01:4173428..4174579 |
| Strand | - |
| Gene length (bp) | 1151 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01214 | CK_II_beta | Casein kinase II regulatory subunit | 3.9E-71 | 10 | 260 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019887 | protein kinase regulator activity | Yes |
| GO:0005956 | protein kinase CK2 complex | Yes |
| GO:0005575 | cellular_component | No |
| GO:0019207 | kinase regulator activity | No |
| GO:0098772 | molecular function regulator activity | No |
| GO:0032991 | protein-containing complex | No |
| GO:0140535 | intracellular protein-containing complex | No |
| GO:0003674 | molecular_function | No |
| GO:0030234 | enzyme regulator activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01142 MSTSSGVAESWISSFCALLGHEYFAEVSEEFIEDDFNLTGLQSQVALYKEALEMILDVEPEDDEDEDDELEDVDE ENESGLPEDQERAAGRTPGQRRHSNPLSDLSVVESSAEMLYGLIHQRFICSRAGIQQMSEKYELGHFGCCPRTNC DLARTLPVGLSDIPGEDTVKLFCPSCLDVYVPPNSRFQTVDGAFFGRTFGALFLLTFPEYDLTKRGSEVLSPNTS RIAADEPILNGIFSKNVAPSLGSGHIYEPRIYGFRVSERARSGPRMQWLRDRPHDINELDEARNYAQQFGDDSDD EDEDEDDEEDADGNANSSNVNMNGRVMVRRRPPGNARLHQRQNRNGSPMQLSTNGAESEL* |
| Coding | >Ophcf2|01142 ATGTCAACGTCCTCGGGTGTTGCCGAATCCTGGATCTCGAGCTTCTGCGCCCTGCTGGGCCACGAGTACTTTGCC GAAGTGTCGGAAGAGTTCATCGAGGATGACTTTAACCTCACAGGTTTGCAGTCGCAGGTTGCCTTGTACAAGGAG GCTCTCGAGATGATTCTCGACGTCGAGCCCGAGGACGACGAAGACGAGGACGACGAACTCGAAGACGTCGACGAA GAGAACGAGTCGGGCCTACCTGAAGACCAGGAACGCGCAGCCGGGAGAACTCCCGGCCAGCGGAGACATAGCAAC CCGCTCAGCGACCTGTCCGTCGTCGAATCCTCGGCCGAGATGCTCTACGGCCTCATCCACCAGCGCTTCATCTGC TCCCGCGCCGGCATCCAACAGATGAGCGAAAAGTACGAACTCGGTCACTTTGGCTGCTGCCCGCGCACAAACTGC GATCTGGCCAGGACTTTACCCGTCGGCCTCTCCGACATACCTGGCGAAGACACGGTCAAGCTCTTCTGCCCCTCG TGTCTCGACGTTTACGTGCCGCCCAACAGCCGGTTTCAGACCGTCGACGGTGCCTTCTTCGGACGCACCTTTGGC GCCCTCTTCCTCCTCACCTTTCCCGAGTACGATCTCACCAAGCGCGGCTCCGAGGTGCTCTCGCCCAACACGTCG AGGATAGCGGCCGACGAGCCCATCCTCAACGGCATCTTCTCCAAGAACGTCGCCCCGAGTCTCGGCTCCGGCCAC ATCTACGAGCCCCGCATCTACGGCTTCCGCGTATCGGAACGCGCCCGGTCCGGCCCTCGCATGCAGTGGCTGCGC GACCGGCCCCACGACATCAACGAGCTCGACGAGGCTCGCAACTACGCCCAACAGTTCGGAGACGACTCTGACGAC GAAGACGAAGACGAGGATGACGAAGAAGACGCTGATGGAAACGCAAACAGCAGCAACGTCAACATGAACGGTCGC GTCATGGTCCGCCGCCGTCCGCCCGGCAACGCCCGCCTACACCAACGCCAAAACCGCAACGGCAGCCCCATGCAA CTCTCCACCAACGGCGCCGAATCCGAGCTCTAG |
| Transcript | >Ophcf2|01142 ATGTCAACGTCCTCGGGTGTTGCCGAATCCTGGATCTCGAGCTTCTGCGCCCTGCTGGGCCACGAGTACTTTGCC GAAGTGTCGGAAGAGTTCATCGAGGATGACTTTAACCTCACAGGTTTGCAGTCGCAGGTTGCCTTGTACAAGGAG GCTCTCGAGATGATTCTCGACGTCGAGCCCGAGGACGACGAAGACGAGGACGACGAACTCGAAGACGTCGACGAA GAGAACGAGTCGGGCCTACCTGAAGACCAGGAACGCGCAGCCGGGAGAACTCCCGGCCAGCGGAGACATAGCAAC CCGCTCAGCGACCTGTCCGTCGTCGAATCCTCGGCCGAGATGCTCTACGGCCTCATCCACCAGCGCTTCATCTGC TCCCGCGCCGGCATCCAACAGATGAGCGAAAAGTACGAACTCGGTCACTTTGGCTGCTGCCCGCGCACAAACTGC GATCTGGCCAGGACTTTACCCGTCGGCCTCTCCGACATACCTGGCGAAGACACGGTCAAGCTCTTCTGCCCCTCG TGTCTCGACGTTTACGTGCCGCCCAACAGCCGGTTTCAGACCGTCGACGGTGCCTTCTTCGGACGCACCTTTGGC GCCCTCTTCCTCCTCACCTTTCCCGAGTACGATCTCACCAAGCGCGGCTCCGAGGTGCTCTCGCCCAACACGTCG AGGATAGCGGCCGACGAGCCCATCCTCAACGGCATCTTCTCCAAGAACGTCGCCCCGAGTCTCGGCTCCGGCCAC ATCTACGAGCCCCGCATCTACGGCTTCCGCGTATCGGAACGCGCCCGGTCCGGCCCTCGCATGCAGTGGCTGCGC GACCGGCCCCACGACATCAACGAGCTCGACGAGGCTCGCAACTACGCCCAACAGTTCGGAGACGACTCTGACGAC GAAGACGAAGACGAGGATGACGAAGAAGACGCTGATGGAAACGCAAACAGCAGCAACGTCAACATGAACGGTCGC GTCATGGTCCGCCGCCGTCCGCCCGGCAACGCCCGCCTACACCAACGCCAAAACCGCAACGGCAGCCCCATGCAA CTCTCCACCAACGGCGCCGAATCCGAGCTCTAG |
| Gene | >Ophcf2|01142 ATGTCAACGTCCTCGGGTGTTGCCGAATCCTGGATCTCGAGCTTCTGCGCCCTGCTGGGCCACGAGTACTTTGCC GAAGTGTCGGAAGAGTTCATCGAGGATGACTTTAACCTCACAGGTTTGCAGTCGCAGGTTGCCTTGTACAAGGAG GCTCTCGAGGTGGGTTGCTGTTCCCCCCCCCCCCCCTTCCCTCTCTCACTCCCGTTCCCGGCTGATGCCCCTAGC AGATGATTCTCGACGTCGAGCCCGAGGACGACGAAGACGAGGACGACGAACTCGAAGACGTCGACGAAGAGAACG AGTCGGGCCTACCTGAAGACCAGGAACGCGCAGCCGGGAGAACTCCCGGCCAGCGGAGACATAGCAACCCGCTCA GCGACCTGTCCGTCGTCGAATCCTCGGCCGAGATGCTCTACGGCCTCATCCACCAGCGCTTCATCTGCTCCCGCG CCGGCATCCAACAGATGAGCGAAAAGTACGAACTCGGTCACTTTGGCTGCTGCCCGCGCACAAACTGCGATCTGG CCAGGACTTTACCCGTCGGCCTCTCCGACATACCTGGCGAAGACACGGTCAAGCTCTTCTGCCCCTCGTGTCTCG ACGTTTACGTGCCGCCCAACAGCCGGTTTCAGACCGTCGACGGTGCCTTCTTCGGACGCACCTTTGGCGCCCTCT TCCTCCTCACCTTTCCCGAGTACGATCTCACCAAGCGCGGCTCCGAGGTGCTCTCGCCCAACACGTCGAGGATAG CGGCCGACGAGCCCATCCTCAACGGCATCTTCTCCAAGAACGTCGCCCCGAGTCTCGGCTCCGGCCACATCTACG AGCCCCGCATCTACGGCTTCCGCGTATCGGAACGCGCCCGGTCCGGCCCTCGCATGCAGTGGCTGCGCGACCGGC CCCACGACATCAACGAGCTCGACGAGGCTCGCAACTACGCCCAACAGTTCGGAGACGACTCTGACGACGAAGACG AAGACGAGGATGACGAAGAAGACGCTGATGGAAACGCAAACAGCAGCAACGTCAACATGAACGGTCGCGTCATGG TCCGCCGCCGTCCGCCCGGCAACGCCCGCCTACACCAACGCCAAAACCGCAACGGCAGCCCCATGCAACTCTCCA CCAACGGCGCCGAATCCGAGCTCTAG |