Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01139
Gene name
Locationscaffold_01:4164135..4167016
Strand-
Gene length (bp)2881
Transcript length (bp)2319
Coding sequence length (bp)2319
Protein length (aa) 773

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 8.3E-09 220 262

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0031323 regulation of cellular metabolic process No
GO:0050794 regulation of cellular process No
GO:0080090 regulation of primary metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0050789 regulation of biological process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0043169 cation binding No
GO:0031326 regulation of cellular biosynthetic process No
GO:0005488 binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0051252 regulation of RNA metabolic process No
GO:0019222 regulation of metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0065007 biological regulation No
GO:0060255 regulation of macromolecule metabolic process No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0008150 biological_process No
GO:0009889 regulation of biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 58.08 33.00 83.16
Alive In ants, during behavior modification 68.87 38.47 99.27
Dead In ants, recently dead 67.63 37.87 97.40

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.403584 no
Alive Dead 0.931093 no
Dead Fungus 0.472999 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01139
MMVDIAARMRIKAARVYWLRLGPLRRGQATAETRPISPGQRALASGHATHPAALAAMSPSRQGEPEEASGLTYPS
PSAEAMDAGPFYHANARDGPSDHPDQADQHGQHDVVQDQGQMPPHDSASPPQHVSRPANLEELQLAAQLGDGLAG
NPMIPATDPNMNVDEHGMRSIMPHPDTEHHQNAQYVHDAPPTDHLAMPVGPPQYQMNDGIPPRKRSKVSRACDEC
RRKKIKCDAQSDSGDNPCSSCARSSIRCLFSRVPQKRGPSKGYIKELADRIHSIENKLESEGNLTQDDIDKLFAP
DRSRSHDQGTPGDELSRKRPYSSISTADVNTPVTARQAPWGSEPRPSTSSEGFPHEGYANSALAPQPSAMKPEPT
PSKPPVASMDATMADVDEVLDVDEGALKEYLTTVQPTFPILPSTTWRMQSLLSQCPSSLREAFRIALATAAQQES
PGDVKHADALLREWDNSDGSSSRASDMVHAQTLLLLSIDADRRELPTLPSLLARAVALANSMKLWRLVAVDATDG
DSDDALSLKIWWSLVLMDRWHAAGTGKPVLIPDSSVVAMAGLATVLGEVCFYLTRLSKVLVRIALVLSAMPAGAT
TADANMATMLKDYVEDYREDLPPHVDVTSFPLVHMAYWHCRLLVTLLTPGSTALEMMWPARELSGLLMAGGQQRS
PLAHHFASLAALCLTKLAKTDKTREDATQRIRDMLEAAPGGQWDGVQARLAEQMGPRSSAEATASQGLQHLADLA
TAHEGIEVAFGPALAAGYLDVQ*
Coding >Ophcf2|01139
ATGATGGTCGACATCGCTGCCCGGATGAGGATCAAAGCAGCCCGAGTTTACTGGCTTCGACTTGGGCCTTTGCGC
CGCGGACAGGCGACAGCAGAGACGCGACCTATTTCACCTGGCCAACGAGCATTGGCCTCTGGACACGCGACGCAC
CCAGCCGCGCTCGCCGCTATGAGCCCGAGCAGGCAGGGCGAGCCTGAGGAGGCTTCCGGCCTCACCTACCCGTCG
CCGAGCGCAGAGGCCATGGACGCGGGACCGTTTTACCACGCCAACGCCCGCGACGGGCCTTCGGACCATCCAGAC
CAGGCGGACCAGCATGGTCAGCACGACGTGGTCCAGGACCAGGGCCAGATGCCGCCTCATGACTCGGCCTCTCCG
CCGCAGCACGTCTCGCGTCCGGCTAATCTGGAGGAGCTTCAGCTTGCCGCCCAGCTGGGTGATGGCCTTGCCGGG
AACCCAATGATACCGGCTACGGATCCCAACATGAATGTCGACGAACATGGCATGCGAAGCATCATGCCTCATCCC
GACACCGAGCACCATCAGAACGCCCAGTACGTCCACGACGCGCCACCCACTGACCACCTGGCCATGCCGGTAGGA
CCGCCTCAGTATCAGATGAACGACGGTATCCCTCCGCGCAAACGGTCCAAAGTGTCACGCGCCTGCGACGAGTGT
CGACGTAAAAAGATCAAGTGCGACGCGCAGTCCGACTCTGGCGATAATCCGTGTTCCAGTTGTGCGCGGTCGTCC
ATCCGCTGCTTGTTCAGCCGTGTGCCACAGAAGCGAGGCCCGAGTAAAGGATACATCAAGGAACTTGCGGACAGG
ATTCATAGCATCGAGAATAAGCTCGAATCAGAGGGCAATTTGACGCAGGACGACATCGACAAGTTGTTCGCCCCC
GATCGATCCAGGAGCCATGACCAGGGCACTCCAGGCGATGAACTCAGCCGGAAAAGGCCGTATTCGAGCATATCG
ACGGCCGACGTCAATACCCCGGTGACGGCGCGCCAGGCGCCCTGGGGCTCGGAGCCTCGGCCATCGACGTCGTCC
GAGGGGTTCCCCCATGAAGGATATGCGAACAGCGCGCTTGCGCCCCAACCGTCGGCGATGAAGCCCGAGCCAACA
CCGTCGAAGCCGCCAGTGGCGTCGATGGATGCCACCATGGCCGATGTCGACGAAGTATTGGATGTGGACGAGGGT
GCTCTCAAGGAATACTTGACGACGGTCCAGCCTACGTTCCCCATTCTACCCAGCACTACCTGGCGCATGCAGTCG
TTGCTGTCGCAGTGCCCGTCGTCTCTCCGGGAAGCGTTCCGCATCGCGCTCGCCACGGCGGCGCAGCAAGAGTCG
CCGGGCGACGTCAAGCATGCTGATGCGCTCCTGCGTGAGTGGGATAATAGCGACGGGTCGAGCAGCCGGGCATCG
GACATGGTGCACGCGCAGACGCTGCTGCTGCTCAGCATCGATGCGGACCGACGAGAGCTGCCGACGCTGCCATCA
CTCCTGGCGCGGGCCGTGGCATTGGCAAACAGCATGAAGCTATGGAGGCTCGTCGCGGTTGATGCGACAGACGGC
GACTCTGACGACGCGCTTTCGCTCAAGATTTGGTGGTCGCTGGTACTAATGGACCGCTGGCACGCGGCGGGGACG
GGGAAGCCGGTGTTGATTCCCGACAGCAGCGTGGTGGCCATGGCTGGCCTGGCAACGGTTCTGGGCGAGGTCTGT
TTCTACCTGACCAGGCTATCCAAGGTTCTCGTACGGATCGCGCTGGTTCTATCAGCAATGCCAGCCGGGGCGACG
ACGGCAGACGCCAACATGGCGACGATGCTGAAGGACTACGTGGAGGACTATAGAGAGGACCTGCCGCCTCACGTG
GACGTGACGTCATTTCCGCTGGTGCACATGGCATACTGGCACTGCCGGCTGCTGGTGACGCTGCTGACGCCGGGG
TCGACTGCGCTGGAGATGATGTGGCCGGCCAGGGAGCTCAGCGGCTTGCTGATGGCGGGCGGACAGCAACGAAGC
CCGCTGGCGCACCACTTCGCCTCTCTGGCGGCGCTGTGCCTGACGAAGCTGGCCAAGACGGACAAGACGCGCGAA
GACGCTACGCAGCGGATCCGGGACATGCTCGAGGCCGCTCCGGGAGGGCAGTGGGACGGGGTGCAGGCGAGGCTG
GCGGAACAAATGGGACCACGATCATCGGCAGAGGCTACGGCCAGCCAGGGACTGCAGCACCTGGCGGATCTGGCG
ACGGCGCACGAGGGCATCGAGGTGGCCTTTGGGCCGGCGCTGGCGGCGGGCTACCTGGACGTGCAGTGA
Transcript >Ophcf2|01139
ATGATGGTCGACATCGCTGCCCGGATGAGGATCAAAGCAGCCCGAGTTTACTGGCTTCGACTTGGGCCTTTGCGC
CGCGGACAGGCGACAGCAGAGACGCGACCTATTTCACCTGGCCAACGAGCATTGGCCTCTGGACACGCGACGCAC
CCAGCCGCGCTCGCCGCTATGAGCCCGAGCAGGCAGGGCGAGCCTGAGGAGGCTTCCGGCCTCACCTACCCGTCG
CCGAGCGCAGAGGCCATGGACGCGGGACCGTTTTACCACGCCAACGCCCGCGACGGGCCTTCGGACCATCCAGAC
CAGGCGGACCAGCATGGTCAGCACGACGTGGTCCAGGACCAGGGCCAGATGCCGCCTCATGACTCGGCCTCTCCG
CCGCAGCACGTCTCGCGTCCGGCTAATCTGGAGGAGCTTCAGCTTGCCGCCCAGCTGGGTGATGGCCTTGCCGGG
AACCCAATGATACCGGCTACGGATCCCAACATGAATGTCGACGAACATGGCATGCGAAGCATCATGCCTCATCCC
GACACCGAGCACCATCAGAACGCCCAGTACGTCCACGACGCGCCACCCACTGACCACCTGGCCATGCCGGTAGGA
CCGCCTCAGTATCAGATGAACGACGGTATCCCTCCGCGCAAACGGTCCAAAGTGTCACGCGCCTGCGACGAGTGT
CGACGTAAAAAGATCAAGTGCGACGCGCAGTCCGACTCTGGCGATAATCCGTGTTCCAGTTGTGCGCGGTCGTCC
ATCCGCTGCTTGTTCAGCCGTGTGCCACAGAAGCGAGGCCCGAGTAAAGGATACATCAAGGAACTTGCGGACAGG
ATTCATAGCATCGAGAATAAGCTCGAATCAGAGGGCAATTTGACGCAGGACGACATCGACAAGTTGTTCGCCCCC
GATCGATCCAGGAGCCATGACCAGGGCACTCCAGGCGATGAACTCAGCCGGAAAAGGCCGTATTCGAGCATATCG
ACGGCCGACGTCAATACCCCGGTGACGGCGCGCCAGGCGCCCTGGGGCTCGGAGCCTCGGCCATCGACGTCGTCC
GAGGGGTTCCCCCATGAAGGATATGCGAACAGCGCGCTTGCGCCCCAACCGTCGGCGATGAAGCCCGAGCCAACA
CCGTCGAAGCCGCCAGTGGCGTCGATGGATGCCACCATGGCCGATGTCGACGAAGTATTGGATGTGGACGAGGGT
GCTCTCAAGGAATACTTGACGACGGTCCAGCCTACGTTCCCCATTCTACCCAGCACTACCTGGCGCATGCAGTCG
TTGCTGTCGCAGTGCCCGTCGTCTCTCCGGGAAGCGTTCCGCATCGCGCTCGCCACGGCGGCGCAGCAAGAGTCG
CCGGGCGACGTCAAGCATGCTGATGCGCTCCTGCGTGAGTGGGATAATAGCGACGGGTCGAGCAGCCGGGCATCG
GACATGGTGCACGCGCAGACGCTGCTGCTGCTCAGCATCGATGCGGACCGACGAGAGCTGCCGACGCTGCCATCA
CTCCTGGCGCGGGCCGTGGCATTGGCAAACAGCATGAAGCTATGGAGGCTCGTCGCGGTTGATGCGACAGACGGC
GACTCTGACGACGCGCTTTCGCTCAAGATTTGGTGGTCGCTGGTACTAATGGACCGCTGGCACGCGGCGGGGACG
GGGAAGCCGGTGTTGATTCCCGACAGCAGCGTGGTGGCCATGGCTGGCCTGGCAACGGTTCTGGGCGAGGTCTGT
TTCTACCTGACCAGGCTATCCAAGGTTCTCGTACGGATCGCGCTGGTTCTATCAGCAATGCCAGCCGGGGCGACG
ACGGCAGACGCCAACATGGCGACGATGCTGAAGGACTACGTGGAGGACTATAGAGAGGACCTGCCGCCTCACGTG
GACGTGACGTCATTTCCGCTGGTGCACATGGCATACTGGCACTGCCGGCTGCTGGTGACGCTGCTGACGCCGGGG
TCGACTGCGCTGGAGATGATGTGGCCGGCCAGGGAGCTCAGCGGCTTGCTGATGGCGGGCGGACAGCAACGAAGC
CCGCTGGCGCACCACTTCGCCTCTCTGGCGGCGCTGTGCCTGACGAAGCTGGCCAAGACGGACAAGACGCGCGAA
GACGCTACGCAGCGGATCCGGGACATGCTCGAGGCCGCTCCGGGAGGGCAGTGGGACGGGGTGCAGGCGAGGCTG
GCGGAACAAATGGGACCACGATCATCGGCAGAGGCTACGGCCAGCCAGGGACTGCAGCACCTGGCGGATCTGGCG
ACGGCGCACGAGGGCATCGAGGTGGCCTTTGGGCCGGCGCTGGCGGCGGGCTACCTGGACGTGCAGTGA
Gene >Ophcf2|01139
ATGATGGTCGACATCGCTGCCCGGATGAGGATCAAGTAGCCGGATGTCTCGCGATGCGCACGTGGCACGCGTGTA
GTCTCGCACGTGATTTCACGTGACCCTTGTTATAGGGAAGGGTTGGCTAAGCTAATTTCCTAGATACACTTCCGA
TTTCTAGTGGGCTATCGGTGGCGGAGCTTCGTCGCCTGAAAAATCTTCCGGGTTTTGACCTGGATTTCCCACGGA
ACCTCCTAACACGGGCCGGATTCTTCTTCTTCCGTTAGACGAGGCCCATCGCATTTAATTCGCCGCTCCTAGAGC
AGCCCGAGTTTGTGAGTCGAACTTCTTCATCCGCCACCAGCCCCCGATTACCATCATAGGGGCTGGCCGCTCTCC
GATTGTCGTCATCGGCCAGCTGACCATGGCCTCAAGACTGGCTTCGACTTGGGCCTTTGCGCCGCGGACAGGCGA
CAGCAGAGACGCGACCTATTTCACCTGGCCAACGAGCATTGGCCTCTGGACACGCGACGCACCCAGCCGCGCTCG
CCGCTATGAGCCCGAGCAGGCAGGGCGAGCCTGAGGAGGCTTCCGGCCTCACCTACCCGTCGCCGAGCGCAGAGG
CCATGGACGCGGGACCGTTTTACCACGCCAACGCCCGCGACGGGCCTTCGGACCATCCAGACCAGGCGGACCAGC
ATGGTCAGCACGACGTGGTCCAGGACCAGGGCCAGATGCCGCCTCATGACTCGGCCTCTCCGCCGCAGCACGTCT
CGCGTCCGGCTAATCTGGAGGAGCTTCAGCTTGCCGCCCAGCTGGGTGATGGCCTTGCCGGGAACCCAATGATAC
CGGCTACGGATCCCAACATGAATGTCGACGAACATGGCATGCGAAGCATCATGCCTCATCCCGACACCGAGCACC
ATCAGAACGCCCAGTACGTCCACGACGCGCCACCCACTGACCACCTGGCCATGCCGGTAGGACCGCCTCAGTATC
AGATGAACGACGGTATCCCTCCGCGCAAACGGTCCAAAGTGTCACGCGCCTGCGACGAGTGTCGACGTAAAAAGA
TCAAGTGCGACGCGCAGTCCGACTCTGGCGATAATCCGTGTTCCAGTTGTGCGCGGTCGTCCATCCGCTGCTTGT
TCAGCCGTGTGCCACAGAAGCGAGGCCCGAGTAAAGGGTACACTGTTCTGCCATTTTGCTTCCAGCACACCTTGG
CTAAGTCGGCTACAGATACATCAAGGAACTTGCGGACAGGATTCATAGCATCGAGAATAAGCTCGAATCAGAGGG
CAATTTGACGCAGGACGACATCGACAAGTTGTTCGCCCCCGATCGATCCAGGAGCCATGACCAGGGCACTCCAGG
CGATGAACTCAGCCGGAAAAGGCCGTATTCGAGCATATCGACGGCCGACGTCAATACCCCGGTGACGGCGCGCCA
GGCGCCCTGGGGCTCGGAGCCTCGGCCATCGACGTCGTCCGAGGGGTTCCCCCATGAAGGATATGCGAACAGCGC
GCTTGCGCCCCAACCGTCGGCGATGAAGCCCGAGCCAACACCGTCGAAGCCGCCAGTGGCGTCGATGGATGCCAC
CATGGCCGATGTCGACGAAGTATTGGATGTGGACGAGGGTGCTCTCAAGGAGTGAGCCTCGCTCTACATGGCGAC
CCGTTTCTGGCCTGTTGCTGATGAACTCTCTTAAAGATACTTGACGACGGTCCAGCCTACGTTCCCCATTCTACC
CAGCACTACCTGGCGCATGCAGTCGTTGCTGTCGCAGTGCCCGTCGTCTCTCCGGGAAGCGTTCCGCATCGCGCT
CGCCACGGCGGCGCAGCAAGAGTCGCCGGGCGACGTCAAGCATGCTGATGCGCTCCTGCGTGAGTGGGATAATAG
CGACGGGTCGAGCAGCCGGGCATCGGACATGGTGCACGCGCAGACGCTGCTGCTGCTCAGCATCGATGCGGACCG
ACGAGAGCTGCCGACGCTGCCATCACTCCTGGCGCGGGCCGTGGCATTGGCAAACAGCATGAAGCTATGGAGGCT
CGTCGCGGTTGATGCGACAGACGGCGACTCTGACGACGCGCTTTCGCTCAAGATTTGGTGGTCGCTGGTACTAAT
GGACCGCTGGCACGCGGCGGGGACGGGGAAGCCGGTGTTGATTCCCGACAGCAGCGTGGTGGCCATGGCTGGCCT
GGCAACGGTTCTGGGCGAGGTCTGTTTCTACCTGACCAGTAAGTGACACTCTCTTACACACTGGAAGCCAACGGC
TGACGCGGCGGGTGTTTTCTTCTCTTTTCTTTTTTTTTTTTTTTTGGCAGGGCTATCCAAGGTTCTCGTACGGAT
CGCGCTGGTTCTATCAGCAATGCCAGCCGGGGCGACGACGGCAGACGCCAACATGGCGACGATGCTGAAGGACTA
CGTGGAGGACTATAGAGAGGACCTGCCGCCTCACGTGGACGTGACGTCATTTCCGCTGGTGCACATGGCATACTG
GCACTGCCGGCTGCTGGTGACGCTGCTGACGCCGGGGTCGACTGCGCTGGAGATGATGTGGCCGGCCAGGGAGCT
CAGCGGCTTGCTGATGGCGGGCGGACAGCAACGAAGCCCGCTGGCGCACCACTTCGCCTCTCTGGCGGCGCTGTG
CCTGACGAAGCTGGCCAAGACGGACAAGACGCGCGAAGACGCTACGCAGCGGATCCGGGACATGCTCGAGGCCGC
TCCGGGAGGGCAGTGGGACGGGGTGCAGGCGAGGCTGGCGGAACAAATGGGACCACGATCATCGGCAGAGGCTAC
GGCCAGCCAGGGACTGCAGCACCTGGCGGATCTGGCGACGGCGCACGAGGGCATCGAGGTGGCCTTTGGGCCGGC
GCTGGCGGCGGGCTACCTGGACGTGCAGTGA

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