Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01134
Gene name
Locationscaffold_01:4137943..4138999
Strand+
Gene length (bp)1056
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 4.4E-16 46 129
PF00153 Mito_carr Mitochondrial carrier protein 1.0E-15 141 236
PF00153 Mito_carr Mitochondrial carrier protein 6.0E-18 241 327

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.5

Transmembrane Domains

Domain # Start End Length
1 309 331 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01134
MTSGSLKQAAESARNKAAEMMNSAKGNGSAIANDFLHTSFMRAALPFINGGISGMVATTVIQPVDMIKVRIQLAG
EGTSSGPKPTPLSVTRQIVASGKVLDLYTGLSAGLLRQAVYTTARLGFFDTIMGRMTTRAKAQGRDIGFAERATA
GLTAGGIAAMIGNPADLALIRMQSDGLKPLAERNNYKSVVDALSSIAKSEGVGALWAGAAPTVVRAMALNFGQLA
FFSEAKAQLKQKTEWSSRTQTLSASAIAGFFASFFSLPFDFVKTRLQKQRRGPDGKLPYSGMADCFTKVAKQEGL
MRFYRGFGTYYVRIAPHAMVTLIVADYLGWITK*
Coding >Ophcf2|01134
ATGACGTCCGGCAGCTTGAAGCAGGCGGCCGAATCGGCCCGCAACAAGGCGGCCGAGATGATGAACTCGGCCAAG
GGCAACGGGTCCGCCATCGCCAACGACTTCCTTCACACGTCCTTTATGAGAGCCGCCCTCCCCTTCATCAACGGC
GGCATCAGCGGCATGGTGGCCACGACCGTCATCCAGCCGGTCGACATGATCAAGGTCCGCATCCAGCTCGCTGGT
GAGGGCACCTCGTCCGGCCCCAAGCCCACTCCCCTGTCCGTCACTCGACAGATCGTGGCCAGTGGCAAGGTACTC
GACCTATACACGGGCTTGTCGGCCGGACTGCTCCGCCAGGCCGTCTACACGACCGCTCGCCTCGGCTTCTTCGAC
ACCATCATGGGCCGCATGACGACGCGAGCCAAGGCCCAGGGCCGTGACATTGGCTTCGCCGAACGAGCCACGGCG
GGCCTGACGGCTGGTGGCATCGCCGCCATGATCGGGAACCCGGCCGATCTAGCCCTCATCCGCATGCAGAGCGAC
GGTCTGAAGCCGCTGGCTGAGCGTAACAACTACAAGTCCGTCGTCGATGCTCTCTCGTCCATCGCCAAGAGCGAG
GGCGTCGGTGCCCTCTGGGCCGGAGCCGCTCCCACCGTGGTCCGGGCCATGGCACTCAACTTTGGCCAGCTTGCC
TTTTTCAGCGAGGCCAAGGCGCAGCTCAAGCAAAAGACGGAGTGGTCTTCGAGGACGCAGACGCTGAGCGCGAGC
GCCATTGCCGGATTCTTTGCCAGCTTCTTCAGCCTGCCCTTTGACTTTGTCAAGACTCGACTGCAGAAGCAGCGC
CGGGGTCCGGACGGGAAGCTCCCTTACAGTGGCATGGCAGACTGCTTCACCAAGGTAGCCAAGCAGGAGGGTCTG
ATGCGTTTCTACCGTGGCTTCGGCACCTACTATGTCCGGATCGCTCCCCATGCCATGGTGACGCTCATCGTGGCC
GACTATCTGGGCTGGATCACCAAGTGA
Transcript >Ophcf2|01134
ATGACGTCCGGCAGCTTGAAGCAGGCGGCCGAATCGGCCCGCAACAAGGCGGCCGAGATGATGAACTCGGCCAAG
GGCAACGGGTCCGCCATCGCCAACGACTTCCTTCACACGTCCTTTATGAGAGCCGCCCTCCCCTTCATCAACGGC
GGCATCAGCGGCATGGTGGCCACGACCGTCATCCAGCCGGTCGACATGATCAAGGTCCGCATCCAGCTCGCTGGT
GAGGGCACCTCGTCCGGCCCCAAGCCCACTCCCCTGTCCGTCACTCGACAGATCGTGGCCAGTGGCAAGGTACTC
GACCTATACACGGGCTTGTCGGCCGGACTGCTCCGCCAGGCCGTCTACACGACCGCTCGCCTCGGCTTCTTCGAC
ACCATCATGGGCCGCATGACGACGCGAGCCAAGGCCCAGGGCCGTGACATTGGCTTCGCCGAACGAGCCACGGCG
GGCCTGACGGCTGGTGGCATCGCCGCCATGATCGGGAACCCGGCCGATCTAGCCCTCATCCGCATGCAGAGCGAC
GGTCTGAAGCCGCTGGCTGAGCGTAACAACTACAAGTCCGTCGTCGATGCTCTCTCGTCCATCGCCAAGAGCGAG
GGCGTCGGTGCCCTCTGGGCCGGAGCCGCTCCCACCGTGGTCCGGGCCATGGCACTCAACTTTGGCCAGCTTGCC
TTTTTCAGCGAGGCCAAGGCGCAGCTCAAGCAAAAGACGGAGTGGTCTTCGAGGACGCAGACGCTGAGCGCGAGC
GCCATTGCCGGATTCTTTGCCAGCTTCTTCAGCCTGCCCTTTGACTTTGTCAAGACTCGACTGCAGAAGCAGCGC
CGGGGTCCGGACGGGAAGCTCCCTTACAGTGGCATGGCAGACTGCTTCACCAAGGTAGCCAAGCAGGAGGGTCTG
ATGCGTTTCTACCGTGGCTTCGGCACCTACTATGTCCGGATCGCTCCCCATGCCATGGTGACGCTCATCGTGGCC
GACTATCTGGGCTGGATCACCAAGTGA
Gene >Ophcf2|01134
ATGACGTCCGGCAGCTTGAAGCAGGCGGCCGAATCGGCCCGCAACAAGGCGGCCGAGATGATGAACTCGGCCAAG
GGCAACGGGTCCGCCATCGCCAACGACTTCCTTCACACGTCCTTTATGAGAGCCGCCCTCCCCTTCATCAACGGC
GGCATCAGCGGCATGGTGGCCACGACCGTCATCCAGCCGGTCGACATGATCAAGGTCCGCATCCAGCTCGCTGGT
GAGGGCACCTCGTCCGGCCCCAAGCCCACTCCCCTGTCCGTCACTCGACAGATCGTGGCCAGTGGCAAGGTACTC
GACCTATACACGGGCTTGTCGGCCGGACTGCTCCGCCAGGCCGTCTACACGACCGCTCGCCTCGGCTTCTTCGAC
ACCATCATGGGCCGCATGACGACGCGAGCCAAGGCCCAGGGCCGTGACATTGGCTTCGCCGAACGAGCCACGGCG
GGCCTGACGGCTGGTGGCATCGCCGCCATGATCGGGAACCCGGCCGATCTAGCCCTCATCCGCATGCAGAGCGAC
GGTCTGAAGCCGCTGGCTGAGCGTAACAACTACAAGTCCGTCGTCGATGCTCTCTCGTCCATCGCCAAGAGCGAG
GGCGTCGGTGCCCTCTGGGCCGGAGCCGCTCCCACCGTGGTCCGGGCCATGGCACTCAACTTTGGCCAGCTTGCC
TTTTTCAGCGAGGCCAAGGCGCAGCTCAAGCAAAAGACGGAGTGGTCTTCGAGGACGCAGACGCTGAGCGCGAGC
GCCATTGCCGGATTCTTTGCCAGCTTCTTCAGCCTGCCCTTTGACTTTGTCAAGACTCGACTGCAGAAGCAGCGC
CGGGGTCCGGACGGGAAGCTCCCTTACAGTGGCATGGCAGACTGCTTCACCAAGGTAGCCAAGCAGGAGGGTCTG
ATGCGTTTCTACCGTGGCTTCGGCACCTACTATGTCCGGATCGCTCCCCATGCGTGAGTGAAACCCCTGGAGAGG
TCGAGTTTCTGGTTGACTGACGATTGATACAGCATGGTGACGCTCATCGTGGCCGACTATCTGGGCTGGATCACC
AAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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