Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01102
Gene name
Locationscaffold_01:4063992..4064907
Strand+
Gene length (bp)915
Transcript length (bp)852
Coding sequence length (bp)852
Protein length (aa) 284

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14880 COX14 Cytochrome oxidase c assembly 8.6E-14 74 128

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 86 108 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01102
MISRLRTRSVKDATRFTSTVPHAMSKANSPTPPRPKSSSWLPGETAEQRVVRLRKAHDAALKAQNDKPMERFLDS
MRVILDAAHKLTVNGLILFTVLAGIVSIYSVWDMLRFNRARRAEWIQVQKKLESDELSAARVAYVKGEGTEEQIA
LVEEANREAARMGTKLPPLLPPPEQRTHFEEKVQPVLFPREASSDGKGILGMVSGFFGGSASSSSSSSSSSSNDE
ADNRIEPDVTTEAMAQTVEAKAESAWETEKERQRSGGSLDRLGLDVGASPGTRRWWPW*
Coding >Ophcf2|01102
ATGATCTCCCGTCTCCGAACACGGAGCGTCAAAGACGCCACTCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACTCCTCCTCGGCCCAAATCTTCGTCCTGGCTGCCCGGCGAGACGGCGGAGCAGCGAGTG
GTGCGTCTGCGGAAGGCGCATGACGCGGCACTCAAGGCTCAGAATGATAAACCGATGGAGCGCTTTCTTGACTCC
ATGAGGGTGATTTTGGACGCGGCTCATAAGTTGACGGTCAATGGCCTTATCCTCTTCACTGTTCTCGCTGGTATT
GTCAGCATCTACTCCGTCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATACAAGTGCAAAAG
AAGCTCGAGTCAGACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAGGAACAGATCGCG
CTCGTCGAAGAGGCCAATCGCGAGGCCGCCAGGATGGGTACCAAGCTGCCGCCGCTGCTACCGCCGCCCGAGCAG
CGGACGCACTTTGAGGAGAAGGTCCAGCCTGTTCTCTTCCCGCGCGAGGCGAGCTCAGATGGGAAGGGTATACTG
GGCATGGTTTCTGGTTTTTTTGGTGGGAGCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACGAA
GCAGACAACCGGATAGAACCCGACGTCACGACCGAGGCCATGGCCCAGACGGTCGAAGCCAAGGCCGAGAGCGCG
TGGGAGACAGAGAAGGAGAGGCAGCGCAGTGGTGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCGCCG
GGGACGAGGCGTTGGTGGCCTTGGTGA
Transcript >Ophcf2|01102
ATGATCTCCCGTCTCCGAACACGGAGCGTCAAAGACGCCACTCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACTCCTCCTCGGCCCAAATCTTCGTCCTGGCTGCCCGGCGAGACGGCGGAGCAGCGAGTG
GTGCGTCTGCGGAAGGCGCATGACGCGGCACTCAAGGCTCAGAATGATAAACCGATGGAGCGCTTTCTTGACTCC
ATGAGGGTGATTTTGGACGCGGCTCATAAGTTGACGGTCAATGGCCTTATCCTCTTCACTGTTCTCGCTGGTATT
GTCAGCATCTACTCCGTCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATACAAGTGCAAAAG
AAGCTCGAGTCAGACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAGGAACAGATCGCG
CTCGTCGAAGAGGCCAATCGCGAGGCCGCCAGGATGGGTACCAAGCTGCCGCCGCTGCTACCGCCGCCCGAGCAG
CGGACGCACTTTGAGGAGAAGGTCCAGCCTGTTCTCTTCCCGCGCGAGGCGAGCTCAGATGGGAAGGGTATACTG
GGCATGGTTTCTGGTTTTTTTGGTGGGAGCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACGAA
GCAGACAACCGGATAGAACCCGACGTCACGACCGAGGCCATGGCCCAGACGGTCGAAGCCAAGGCCGAGAGCGCG
TGGGAGACAGAGAAGGAGAGGCAGCGCAGTGGTGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCGCCG
GGGACGAGGCGTTGGTGGCCTTGGTGA
Gene >Ophcf2|01102
ATGATCTCCCGTCTCCGAACACGGAGCGTCAAAGACGCCACTCGATTCACCTCGACGGTGCCCCACGCCATGTCC
AAAGCCAACAGCCCGACTCCTCCTCGGCCCAAATCTTCGTCCTGGCTGCCCGGCGAGACGGCGGAGCAGCGAGTG
GTGCGTCTGCGGAAGGCGCATGACGCGGCACTCAAGGCTCAGAATGATAAACCGATGGAGCGCTTTCTTGACTCC
ATGAGGGTGATTTTGGACGCGGCTCATAAGTTGACGGTCAATGGCCTTATCCTCTTCACTGGTATCGCTCCGCCT
CTAATTTTCCCGATTGTTTTCAGACGAACAGATGGCTAAGATTTGGCAGTTCTCGCTGGTATTGTCAGCATCTAC
TCCGTCTGGGACATGCTACGGTTCAACCGCGCCCGCCGCGCCGAATGGATACAAGTGCAAAAGAAGCTCGAGTCA
GACGAGCTATCAGCCGCGCGAGTAGCCTACGTGAAAGGCGAAGGCACCGAGGAACAGATCGCGCTCGTCGAAGAG
GCCAATCGCGAGGCCGCCAGGATGGGTACCAAGCTGCCGCCGCTGCTACCGCCGCCCGAGCAGCGGACGCACTTT
GAGGAGAAGGTCCAGCCTGTTCTCTTCCCGCGCGAGGCGAGCTCAGATGGGAAGGGTATACTGGGCATGGTTTCT
GGTTTTTTTGGTGGGAGCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACGAAGCAGACAACCGG
ATAGAACCCGACGTCACGACCGAGGCCATGGCCCAGACGGTCGAAGCCAAGGCCGAGAGCGCGTGGGAGACAGAG
AAGGAGAGGCAGCGCAGTGGTGGGAGTCTCGACAGGCTAGGGCTGGACGTTGGGGCGTCGCCGGGGACGAGGCGT
TGGTGGCCTTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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