Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01094
Gene name
Locationscaffold_01:4052466..4053596
Strand+
Gene length (bp)1130
Transcript length (bp)999
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03134 TB2_DP1_HVA22 TB2/DP1, HVA22 family 6.3E-24 18 94

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 61 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01094
MFDLFAMFLSSITSFLLPIFASYKALKTSDPAQLTAWLMYWVVFNCCLLAESWVSFILVWIPFYGYIRFFFFLYL
ILPQTQGARTLYEEKIHPFLEENEGSIDKLIATTHQRLRAAGSSYLLKAIDYLKTKILGLPRSEPPPPPPPAGPS
GYTQSLLARFSVPTARLPAAAYSGNDFYNMLAGAVSAAAGGGSRAAGNDSAPLIPPDLRGSAEKMTFIAAQRERL
NVLLSALDREAQELQRADAEQYTSRDDTRDDTRDDTRSRSRSSGAGLSKSRSETDFEKVEAESGDEDGADGSLRR
RQVPGGGAAGSSWIPWGWTAGAGATKSSSREG*
Coding >Ophcf2|01094
ATGTTCGACCTCTTCGCCATGTTCCTCTCCTCCATCACCTCCTTTCTCCTTCCCATCTTCGCCTCCTACAAGGCC
CTCAAGACGTCCGACCCGGCCCAGCTGACGGCCTGGCTCATGTACTGGGTCGTATTCAACTGCTGCCTCCTCGCT
GAATCATGGGTGTCCTTTATCCTCGTCTGGATCCCGTTCTACGGCTACATTCGATTCTTCTTCTTCCTCTACCTG
ATTCTGCCCCAGACACAAGGCGCGCGCACTCTCTACGAAGAAAAGATCCACCCCTTCCTCGAGGAGAACGAGGGC
TCCATCGATAAACTCATCGCAACCACACACCAGCGCCTCCGCGCCGCCGGCTCGTCCTACCTGCTAAAGGCTATA
GACTATCTCAAGACAAAAATCCTCGGCCTTCCTCGCTCCGAGCCGCCTCCTCCTCCGCCACCCGCTGGCCCCTCC
GGCTACACCCAGTCGCTCCTCGCCCGCTTTAGCGTTCCCACGGCGAGGCTGCCGGCCGCCGCGTACTCCGGCAAC
GACTTCTACAACATGCTCGCCGGCGCCGTCTCCGCTGCCGCCGGCGGAGGTAGCCGCGCCGCTGGAAACGACTCG
GCCCCCCTCATCCCGCCCGATCTGCGCGGCTCGGCCGAGAAGATGACCTTCATCGCCGCTCAGCGCGAACGGCTC
AATGTGCTCCTCTCGGCCCTCGACCGTGAGGCTCAGGAGCTTCAGAGAGCCGACGCTGAACAATACACATCCCGC
GACGATACCCGCGACGATACCCGCGACGATACCCGCTCGCGCTCGCGTTCCAGCGGCGCCGGCCTGAGCAAGAGC
CGCAGCGAGACCGACTTCGAAAAGGTTGAGGCCGAGAGCGGCGACGAGGACGGCGCCGACGGGAGCCTTCGCAGG
CGTCAGGTTCCCGGTGGCGGCGCGGCAGGCAGTTCGTGGATACCTTGGGGATGGACAGCCGGTGCAGGCGCGACA
AAGAGCTCTTCACGCGAGGGATAG
Transcript >Ophcf2|01094
ATGTTCGACCTCTTCGCCATGTTCCTCTCCTCCATCACCTCCTTTCTCCTTCCCATCTTCGCCTCCTACAAGGCC
CTCAAGACGTCCGACCCGGCCCAGCTGACGGCCTGGCTCATGTACTGGGTCGTATTCAACTGCTGCCTCCTCGCT
GAATCATGGGTGTCCTTTATCCTCGTCTGGATCCCGTTCTACGGCTACATTCGATTCTTCTTCTTCCTCTACCTG
ATTCTGCCCCAGACACAAGGCGCGCGCACTCTCTACGAAGAAAAGATCCACCCCTTCCTCGAGGAGAACGAGGGC
TCCATCGATAAACTCATCGCAACCACACACCAGCGCCTCCGCGCCGCCGGCTCGTCCTACCTGCTAAAGGCTATA
GACTATCTCAAGACAAAAATCCTCGGCCTTCCTCGCTCCGAGCCGCCTCCTCCTCCGCCACCCGCTGGCCCCTCC
GGCTACACCCAGTCGCTCCTCGCCCGCTTTAGCGTTCCCACGGCGAGGCTGCCGGCCGCCGCGTACTCCGGCAAC
GACTTCTACAACATGCTCGCCGGCGCCGTCTCCGCTGCCGCCGGCGGAGGTAGCCGCGCCGCTGGAAACGACTCG
GCCCCCCTCATCCCGCCCGATCTGCGCGGCTCGGCCGAGAAGATGACCTTCATCGCCGCTCAGCGCGAACGGCTC
AATGTGCTCCTCTCGGCCCTCGACCGTGAGGCTCAGGAGCTTCAGAGAGCCGACGCTGAACAATACACATCCCGC
GACGATACCCGCGACGATACCCGCGACGATACCCGCTCGCGCTCGCGTTCCAGCGGCGCCGGCCTGAGCAAGAGC
CGCAGCGAGACCGACTTCGAAAAGGTTGAGGCCGAGAGCGGCGACGAGGACGGCGCCGACGGGAGCCTTCGCAGG
CGTCAGGTTCCCGGTGGCGGCGCGGCAGGCAGTTCGTGGATACCTTGGGGATGGACAGCCGGTGCAGGCGCGACA
AAGAGCTCTTCACGCGAGGGATAG
Gene >Ophcf2|01094
ATGTTCGACCTCTTCGCCATGTTCCTCTCGTGCGCACGCCCACGATGAAAACTCGCTCGACGCCCGCTGACTCTC
ACGCTCTACAGCTCCATCACCTCCTTTCTCCTTCCCATCTTCGCCTCCTACAAGGCCCTCAAGACGTCCGACCCG
GCCCAGCTGACGGCCTGGCTCATGTACTGGGTCGTATTCAACTGCTGCCTCCTCGCTGAATCATGGGTGTCCTTT
ATCCTCGTCTGGTGCGTCGAAAGAACCGCGCGCCCCCTCTTCACTTCACCGTCTCCAAGTTATTGACGCCGATTT
GCGCCCTTAGGATCCCGTTCTACGGCTACATTCGATTCTTCTTCTTCCTCTACCTGATTCTGCCCCAGACACAAG
GCGCGCGCACTCTCTACGAAGAAAAGATCCACCCCTTCCTCGAGGAGAACGAGGGCTCCATCGATAAACTCATCG
CAACCACACACCAGCGCCTCCGCGCCGCCGGCTCGTCCTACCTGCTAAAGGCTATAGACTATCTCAAGACAAAAA
TCCTCGGCCTTCCTCGCTCCGAGCCGCCTCCTCCTCCGCCACCCGCTGGCCCCTCCGGCTACACCCAGTCGCTCC
TCGCCCGCTTTAGCGTTCCCACGGCGAGGCTGCCGGCCGCCGCGTACTCCGGCAACGACTTCTACAACATGCTCG
CCGGCGCCGTCTCCGCTGCCGCCGGCGGAGGTAGCCGCGCCGCTGGAAACGACTCGGCCCCCCTCATCCCGCCCG
ATCTGCGCGGCTCGGCCGAGAAGATGACCTTCATCGCCGCTCAGCGCGAACGGCTCAATGTGCTCCTCTCGGCCC
TCGACCGTGAGGCTCAGGAGCTTCAGAGAGCCGACGCTGAACAATACACATCCCGCGACGATACCCGCGACGATA
CCCGCGACGATACCCGCTCGCGCTCGCGTTCCAGCGGCGCCGGCCTGAGCAAGAGCCGCAGCGAGACCGACTTCG
AAAAGGTTGAGGCCGAGAGCGGCGACGAGGACGGCGCCGACGGGAGCCTTCGCAGGCGTCAGGTTCCCGGTGGCG
GCGCGGCAGGCAGTTCGTGGATACCTTGGGGATGGACAGCCGGTGCAGGCGCGACAAAGAGCTCTTCACGCGAGG
GATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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