Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01081
Gene name
Locationscaffold_01:4011920..4013334
Strand-
Gene length (bp)1414
Transcript length (bp)1305
Coding sequence length (bp)1305
Protein length (aa) 435

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 64 19
3 104 126 22
4 138 160 22
5 194 216 22
6 229 251 22
7 274 296 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01081
MGRHPSALDFAAAALLLVTAVASFVLVLCALCLARRRGDAARSWIVFYRAALAFFLPAIVLSFAKHLLAIVYREL
HDVSIQANANAVLSGLLQAQVETNVIGALFHELALIFCLVSLAGLATGIAVADSGKPSSLDSIIRLASYAVGALL
VILDVVGFALSEKFFAVVYARQDMNQEGLDAPESIWQALRANDVTLPMLIIQQIFAVALSARFTFVAFRTRSKQR
LKTPIRYLGLCILLLVLKTSYDVAFYGQYHPPDRYQHADLTTSLPKPYFVIVNILVSIWPVFFVLVALLVLSVKK
QRGLWAADPPLTLRTGPDMPLQTPWGYNYSPQSQQPLHPGSQQLHCPTGPTPPATYGHQHSPDDRYAQFRQGASS
PPPPQWHAASSPPHQQQQYNMTGSLPSPPPPAHSEAMGLYHQADGMPPQVVPLPYDEKT*
Coding >Ophcf2|01081
ATGGGCCGCCACCCGTCGGCCCTCGACTTTGCCGCCGCCGCTCTCCTGCTCGTCACGGCCGTCGCCTCCTTCGTC
CTCGTCTTGTGCGCCTTGTGTCTGGCTAGGCGTCGCGGCGATGCTGCCAGGTCGTGGATCGTCTTCTACAGGGCT
GCCTTGGCATTTTTCCTCCCTGCCATTGTCCTCTCCTTCGCCAAACATCTCCTCGCCATCGTCTACAGAGAGTTG
CATGACGTCTCCATCCAGGCCAACGCCAACGCTGTTCTCTCCGGCCTCCTGCAGGCCCAGGTAGAGACCAATGTC
ATCGGCGCCCTCTTTCACGAGCTGGCCCTCATCTTCTGCCTCGTCTCTCTCGCTGGCCTGGCCACCGGCATCGCA
GTCGCCGACTCTGGGAAGCCGTCATCGCTAGACAGCATCATACGCCTGGCCTCGTACGCCGTCGGTGCCCTGCTC
GTCATCCTCGATGTCGTCGGCTTCGCACTGAGTGAAAAGTTCTTTGCCGTCGTCTACGCCCGTCAGGATATGAAC
CAGGAGGGCCTCGACGCTCCCGAGTCTATATGGCAGGCCTTGCGCGCCAACGACGTCACTCTACCCATGCTCATC
ATCCAGCAAATCTTTGCTGTGGCCCTCTCCGCTCGATTCACCTTTGTCGCCTTCCGTACAAGGTCAAAGCAGAGA
CTCAAGACGCCCATCAGATATCTCGGGCTTTGCATCCTCTTGCTCGTCCTCAAGACATCATACGACGTTGCGTTC
TACGGCCAATACCATCCGCCCGACCGATACCAGCATGCCGACCTGACGACGTCTCTGCCCAAGCCATACTTTGTC
ATCGTCAACATCCTTGTCAGCATCTGGCCCGTCTTCTTTGTCCTCGTCGCCCTGCTCGTCCTGTCCGTCAAGAAG
CAGCGCGGCCTCTGGGCTGCCGACCCTCCGCTCACCCTCCGCACCGGCCCGGATATGCCTCTCCAGACTCCCTGG
GGCTACAACTACAGCCCGCAGAGCCAGCAGCCTCTGCATCCGGGGTCGCAGCAGCTTCATTGCCCAACCGGCCCC
ACGCCACCGGCCACCTACGGCCATCAGCACTCACCGGATGACCGATACGCTCAATTCCGCCAAGGAGCTTCCTCT
CCGCCGCCGCCGCAGTGGCACGCCGCCTCGTCTCCCCCTCACCAGCAGCAACAGTATAACATGACGGGCTCTCTA
CCGTCACCACCGCCACCTGCCCACTCCGAGGCCATGGGCTTGTATCACCAGGCGGACGGCATGCCTCCGCAAGTG
GTGCCCCTGCCCTACGACGAGAAGACGTGA
Transcript >Ophcf2|01081
ATGGGCCGCCACCCGTCGGCCCTCGACTTTGCCGCCGCCGCTCTCCTGCTCGTCACGGCCGTCGCCTCCTTCGTC
CTCGTCTTGTGCGCCTTGTGTCTGGCTAGGCGTCGCGGCGATGCTGCCAGGTCGTGGATCGTCTTCTACAGGGCT
GCCTTGGCATTTTTCCTCCCTGCCATTGTCCTCTCCTTCGCCAAACATCTCCTCGCCATCGTCTACAGAGAGTTG
CATGACGTCTCCATCCAGGCCAACGCCAACGCTGTTCTCTCCGGCCTCCTGCAGGCCCAGGTAGAGACCAATGTC
ATCGGCGCCCTCTTTCACGAGCTGGCCCTCATCTTCTGCCTCGTCTCTCTCGCTGGCCTGGCCACCGGCATCGCA
GTCGCCGACTCTGGGAAGCCGTCATCGCTAGACAGCATCATACGCCTGGCCTCGTACGCCGTCGGTGCCCTGCTC
GTCATCCTCGATGTCGTCGGCTTCGCACTGAGTGAAAAGTTCTTTGCCGTCGTCTACGCCCGTCAGGATATGAAC
CAGGAGGGCCTCGACGCTCCCGAGTCTATATGGCAGGCCTTGCGCGCCAACGACGTCACTCTACCCATGCTCATC
ATCCAGCAAATCTTTGCTGTGGCCCTCTCCGCTCGATTCACCTTTGTCGCCTTCCGTACAAGGTCAAAGCAGAGA
CTCAAGACGCCCATCAGATATCTCGGGCTTTGCATCCTCTTGCTCGTCCTCAAGACATCATACGACGTTGCGTTC
TACGGCCAATACCATCCGCCCGACCGATACCAGCATGCCGACCTGACGACGTCTCTGCCCAAGCCATACTTTGTC
ATCGTCAACATCCTTGTCAGCATCTGGCCCGTCTTCTTTGTCCTCGTCGCCCTGCTCGTCCTGTCCGTCAAGAAG
CAGCGCGGCCTCTGGGCTGCCGACCCTCCGCTCACCCTCCGCACCGGCCCGGATATGCCTCTCCAGACTCCCTGG
GGCTACAACTACAGCCCGCAGAGCCAGCAGCCTCTGCATCCGGGGTCGCAGCAGCTTCATTGCCCAACCGGCCCC
ACGCCACCGGCCACCTACGGCCATCAGCACTCACCGGATGACCGATACGCTCAATTCCGCCAAGGAGCTTCCTCT
CCGCCGCCGCCGCAGTGGCACGCCGCCTCGTCTCCCCCTCACCAGCAGCAACAGTATAACATGACGGGCTCTCTA
CCGTCACCACCGCCACCTGCCCACTCCGAGGCCATGGGCTTGTATCACCAGGCGGACGGCATGCCTCCGCAAGTG
GTGCCCCTGCCCTACGACGAGAAGACGTGA
Gene >Ophcf2|01081
ATGGGCCGCCACCCGTCGGCCCTCGACTTTGCCGCCGCCGCTCTCCTGCTCGTCACGGCCGTCGCCTCCTTCGTC
CTCGTCTTGTGCGCCTTGTGTCTGGCTAGGCGTCGCGGCGATGCTGCCAGGTCGTGGATCGTCTTCTACAGGGCT
GCCTTGGCATTTTTCCTCCCGTCGGTTGACCCATTCTTGCTTTTCAGGTCCTTGTCTTACCTCTTCGTCCAGTGC
CATTGTCCTCTCCTTCGCCAAACATCTCCTCGCCATCGTCTACAGAGAGTTGCATGACGTCTCCATCCAGGCCAA
CGCCAACGCTGTTCTCTCCGGCCTCCTGCAGGCCCAGGTAGAGACCAATGTCATCGGCGCCCTCTTTCACGAGCT
GGCCCTCATCTTCTGCCTCGTCTCTCTCGCTGGCCTGGCCACCGGCATCGCAGTCGCCGACTCTGGGAAGCCGTC
ATCGCTAGACAGCATCATACGCCTGGCCTCGTACGCCGTCGGTGCCCTGCTCGTCATCCTCGATGTCGTCGGCTT
CGCACTGAGTGAAAAGTTCTTTGCCGTCGTCTACGCCCGTCAGGATATGAACCAGGAGGGCCTCGACGCTCCCGA
GTCTATATGGCAGGCCTTGCGCGCCAACGACGTCACTCTACCCATGCTCATCATCCAGCAAATCTTTGCTGTGGC
CCTCTCCGCTCGATTCACCTTTGTCGCCTTCCGTACAAGGTCAAAGCAGAGACTCAAGACGGTAAGCTCATCTCC
TCACCTCTCACTCGCCCAAGAGACTGATCACAAGTTTCCACAGCCCATCAGATATCTCGGGCTTTGCATCCTCTT
GCTCGTCCTCAAGACATCATACGACGTTGCGTTCTACGGCCAATACCATCCGCCCGACCGATACCAGCATGCCGA
CCTGACGACGTCTCTGCCCAAGCCATACTTTGTCATCGTCAACATCCTTGTCAGCATCTGGCCCGTCTTCTTTGT
CCTCGTCGCCCTGCTCGTCCTGTCCGTCAAGAAGCAGCGCGGCCTCTGGGCTGCCGACCCTCCGCTCACCCTCCG
CACCGGCCCGGATATGCCTCTCCAGACTCCCTGGGGCTACAACTACAGCCCGCAGAGCCAGCAGCCTCTGCATCC
GGGGTCGCAGCAGCTTCATTGCCCAACCGGCCCCACGCCACCGGCCACCTACGGCCATCAGCACTCACCGGATGA
CCGATACGCTCAATTCCGCCAAGGAGCTTCCTCTCCGCCGCCGCCGCAGTGGCACGCCGCCTCGTCTCCCCCTCA
CCAGCAGCAACAGTATAACATGACGGGCTCTCTACCGTCACCACCGCCACCTGCCCACTCCGAGGCCATGGGCTT
GTATCACCAGGCGGACGGCATGCCTCCGCAAGTGGTGCCCCTGCCCTACGACGAGAAGACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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