Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01069
Gene name
Locationscaffold_01:3979144..3980055
Strand-
Gene length (bp)911
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 2.6E-20 9 120

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

Domain # Start End Length
1 243 260 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01069
MATKAAQKRLTREYKSISENPPPYIVAHPSESNILEWHYIITGPEDTPYHGGQYWGTLMFPPDYPFAPPAIRMHT
PSGRFQPSTRLCLSISDFHPKSFNPAWEVSTILIGLLSFMTSDEMTTGSVSTTTAEKKFLASRSRWWNSTGGGSL
AKANPAQRGNVKAGDGGAKFRAEWPEVDGENGEWMKKNKIDTATGQRLDGDNGSSCGPQLSIGVTSSNQTQAVVD
VVVQQRDAGRGWISRNKVLVAGGVVFLYVLIARLVRGDGLA*
Coding >Ophcf2|01069
ATGGCCACCAAGGCGGCGCAGAAGCGGTTGACCCGCGAGTACAAGTCCATCTCGGAGAACCCGCCGCCGTACATT
GTGGCGCATCCCTCCGAGTCTAACATCCTTGAGTGGCACTACATCATCACCGGACCTGAAGACACGCCTTATCAC
GGGGGCCAATACTGGGGCACGCTTATGTTCCCGCCAGACTACCCATTCGCGCCCCCGGCGATCCGCATGCACACG
CCATCGGGCCGCTTCCAGCCGTCAACGCGTCTCTGTCTGTCCATCTCCGACTTTCATCCCAAGTCGTTCAACCCT
GCGTGGGAGGTGTCGACCATTCTCATCGGGCTGCTGTCGTTTATGACGAGCGATGAGATGACTACGGGGTCCGTG
TCGACGACTACGGCCGAGAAGAAGTTTCTGGCGTCGCGCTCGCGTTGGTGGAACTCGACCGGCGGCGGTTCGCTG
GCCAAGGCAAACCCGGCGCAAAGGGGCAATGTCAAGGCTGGCGATGGGGGCGCCAAGTTCCGAGCAGAATGGCCC
GAGGTCGATGGGGAAAATGGCGAGTGGATGAAAAAGAACAAGATTGATACGGCGACCGGGCAGCGGCTGGATGGC
GATAACGGCTCGTCCTGCGGACCGCAACTCAGCATCGGCGTGACGAGCAGCAACCAGACGCAGGCCGTGGTGGAT
GTCGTGGTGCAGCAGCGCGACGCCGGCCGTGGCTGGATATCTCGAAACAAGGTGCTCGTCGCGGGCGGAGTTGTC
TTTCTCTACGTGTTGATTGCGAGGCTTGTCCGCGGCGACGGCTTGGCGTGA
Transcript >Ophcf2|01069
ATGGCCACCAAGGCGGCGCAGAAGCGGTTGACCCGCGAGTACAAGTCCATCTCGGAGAACCCGCCGCCGTACATT
GTGGCGCATCCCTCCGAGTCTAACATCCTTGAGTGGCACTACATCATCACCGGACCTGAAGACACGCCTTATCAC
GGGGGCCAATACTGGGGCACGCTTATGTTCCCGCCAGACTACCCATTCGCGCCCCCGGCGATCCGCATGCACACG
CCATCGGGCCGCTTCCAGCCGTCAACGCGTCTCTGTCTGTCCATCTCCGACTTTCATCCCAAGTCGTTCAACCCT
GCGTGGGAGGTGTCGACCATTCTCATCGGGCTGCTGTCGTTTATGACGAGCGATGAGATGACTACGGGGTCCGTG
TCGACGACTACGGCCGAGAAGAAGTTTCTGGCGTCGCGCTCGCGTTGGTGGAACTCGACCGGCGGCGGTTCGCTG
GCCAAGGCAAACCCGGCGCAAAGGGGCAATGTCAAGGCTGGCGATGGGGGCGCCAAGTTCCGAGCAGAATGGCCC
GAGGTCGATGGGGAAAATGGCGAGTGGATGAAAAAGAACAAGATTGATACGGCGACCGGGCAGCGGCTGGATGGC
GATAACGGCTCGTCCTGCGGACCGCAACTCAGCATCGGCGTGACGAGCAGCAACCAGACGCAGGCCGTGGTGGAT
GTCGTGGTGCAGCAGCGCGACGCCGGCCGTGGCTGGATATCTCGAAACAAGGTGCTCGTCGCGGGCGGAGTTGTC
TTTCTCTACGTGTTGATTGCGAGGCTTGTCCGCGGCGACGGCTTGGCGTGA
Gene >Ophcf2|01069
ATGGCCACCAAGGCGGCGCAGAAGCGGGCATGTATCCTCGCTCATCTGCGAATAAGCTACATCCCGTGCTGACTG
CCGCGCAGTTGACCCGCGAGTACAAGTCCATCTCGGAGAACCCGCCGCCGTACATTGTGGCGCATCCCTCCGAGT
CTAACATCCTTGAGTAGGTGGATTTCAAGGCACGATGGACTCGTTCTCTTACTGACGCGCTTTCAAGGTGGCACT
ACATCATCACCGGACCTGAAGACACGCCTTATCACGGGGGCCAATACTGGGGCACGCTTATGTTCCCGCCAGACT
ACCCATTCGCGCCCCCGGCGATCCGCATGCACACGCCATCGGGCCGCTTCCAGCCGTCAACGCGTCTCTGTCTGT
CCATCTCCGACTTTCATCCCAAGTCGTTCAACCCTGCGTGGGAGGTGTCGACCATTCTCATCGGGCTGCTGTCGT
TTATGACGAGCGATGAGATGACTACGGGGTCCGTGTCGACGACTACGGCCGAGAAGAAGTTTCTGGCGTCGCGCT
CGCGTTGGTGGAACTCGACCGGCGGCGGTTCGCTGGCCAAGGCAAACCCGGCGCAAAGGGGCAATGTCAAGGCTG
GCGATGGGGGCGCCAAGTTCCGAGCAGAATGGCCCGAGGTCGATGGGGAAAATGGCGAGTGGATGAAAAAGAACA
AGATTGATACGGCGACCGGGCAGCGGCTGGATGGCGATAACGGCTCGTCCTGCGGACCGCAACTCAGCATCGGCG
TGACGAGCAGCAACCAGACGCAGGCCGTGGTGGATGTCGTGGTGCAGCAGCGCGACGCCGGCCGTGGCTGGATAT
CTCGAAACAAGGTGCTCGTCGCGGGCGGAGTTGTCTTTCTCTACGTGTTGATTGCGAGGCTTGTCCGCGGCGACG
GCTTGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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