Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01048
Gene name
Locationscaffold_01:3928272..3929341
Strand+
Gene length (bp)1069
Transcript length (bp)1008
Coding sequence length (bp)1008
Protein length (aa) 336

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01027 Bax1-I Inhibitor of apoptosis-promoting Bax1 1.3E-34 112 328

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 79 97 18
2 118 137 19
3 141 163 22
4 183 205 22
5 209 226 17
6 233 255 22
7 270 292 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01048
MFLVAGIRQGPARLTQLSKTAVRTLQRPSSTSATVRPRIAFQAASRNAFSRAGAGKRAYHDDALSRQQFGADGSG
MRKLLIGGAIFGGTLLAVNAVFNRETRDDGGMPHYEREYLNSTFLHTGLGIGIIGLTARQMVRTGFVYRLMVTNP
WVVCIGGLALSFGTMIGTRSISPDNYIPKYACWVAFNATQAAFVAPLLAFVPMPLLARAGLYTVGVMGALSVVGA
TAKQEKYLYIGGPLLAGAAVVALSGLAPMVLPVTAVRTLAFTDKLWLYGGLAVFGGFTLYDVQKVLHHARLAQAG
MMRRDAVNESISLELDFLNIFIRLVQILMMNQGRK*
Coding >Ophcf2|01048
ATGTTTCTCGTGGCCGGCATCCGTCAGGGCCCCGCGCGGCTCACGCAGCTGTCCAAGACTGCAGTCAGGACCTTG
CAGAGGCCATCTTCGACCTCGGCCACGGTCCGCCCTCGAATCGCCTTCCAGGCCGCGTCTCGCAACGCCTTCTCC
CGCGCGGGCGCTGGCAAGCGTGCCTACCACGATGATGCGCTCAGCCGGCAGCAGTTTGGGGCCGACGGCTCCGGT
ATGCGCAAGCTGCTGATCGGCGGTGCCATCTTCGGAGGCACACTGCTGGCCGTCAACGCCGTTTTCAACCGCGAG
ACGCGCGACGATGGAGGCATGCCTCACTACGAGCGCGAGTACCTCAACAGCACTTTTCTCCATACGGGCCTCGGC
ATCGGCATCATCGGCTTGACGGCGAGGCAGATGGTTAGGACGGGCTTCGTCTATAGACTGATGGTCACGAATCCT
TGGGTGGTCTGCATCGGTGGTCTCGCCCTCAGCTTCGGCACCATGATTGGAACCAGGTCCATCAGCCCTGACAAC
TACATCCCCAAATACGCCTGCTGGGTGGCCTTTAACGCGACGCAAGCTGCTTTCGTCGCTCCGCTGCTCGCCTTT
GTGCCAATGCCGTTGTTGGCCCGCGCCGGCCTCTACACCGTCGGCGTCATGGGAGCCCTGTCGGTGGTGGGCGCG
ACGGCCAAGCAGGAGAAGTACCTCTACATCGGCGGTCCTCTCTTGGCGGGAGCCGCCGTTGTAGCCCTGTCTGGT
CTGGCGCCCATGGTGCTGCCCGTGACGGCGGTGCGCACGCTGGCCTTCACCGACAAGCTGTGGCTGTACGGCGGG
CTGGCCGTCTTTGGCGGCTTCACGCTGTACGATGTGCAGAAGGTGCTGCACCACGCGCGACTGGCGCAGGCCGGC
ATGATGAGACGCGATGCCGTCAACGAGAGCATCTCTCTGGAGCTGGACTTTTTGAACATTTTCATTCGCCTTGTA
CAGATCTTGATGATGAATCAGGGCAGGAAGTAG
Transcript >Ophcf2|01048
ATGTTTCTCGTGGCCGGCATCCGTCAGGGCCCCGCGCGGCTCACGCAGCTGTCCAAGACTGCAGTCAGGACCTTG
CAGAGGCCATCTTCGACCTCGGCCACGGTCCGCCCTCGAATCGCCTTCCAGGCCGCGTCTCGCAACGCCTTCTCC
CGCGCGGGCGCTGGCAAGCGTGCCTACCACGATGATGCGCTCAGCCGGCAGCAGTTTGGGGCCGACGGCTCCGGT
ATGCGCAAGCTGCTGATCGGCGGTGCCATCTTCGGAGGCACACTGCTGGCCGTCAACGCCGTTTTCAACCGCGAG
ACGCGCGACGATGGAGGCATGCCTCACTACGAGCGCGAGTACCTCAACAGCACTTTTCTCCATACGGGCCTCGGC
ATCGGCATCATCGGCTTGACGGCGAGGCAGATGGTTAGGACGGGCTTCGTCTATAGACTGATGGTCACGAATCCT
TGGGTGGTCTGCATCGGTGGTCTCGCCCTCAGCTTCGGCACCATGATTGGAACCAGGTCCATCAGCCCTGACAAC
TACATCCCCAAATACGCCTGCTGGGTGGCCTTTAACGCGACGCAAGCTGCTTTCGTCGCTCCGCTGCTCGCCTTT
GTGCCAATGCCGTTGTTGGCCCGCGCCGGCCTCTACACCGTCGGCGTCATGGGAGCCCTGTCGGTGGTGGGCGCG
ACGGCCAAGCAGGAGAAGTACCTCTACATCGGCGGTCCTCTCTTGGCGGGAGCCGCCGTTGTAGCCCTGTCTGGT
CTGGCGCCCATGGTGCTGCCCGTGACGGCGGTGCGCACGCTGGCCTTCACCGACAAGCTGTGGCTGTACGGCGGG
CTGGCCGTCTTTGGCGGCTTCACGCTGTACGATGTGCAGAAGGTGCTGCACCACGCGCGACTGGCGCAGGCCGGC
ATGATGAGACGCGATGCCGTCAACGAGAGCATCTCTCTGGAGCTGGACTTTTTGAACATTTTCATTCGCCTTGTA
CAGATCTTGATGATGAATCAGGGCAGGAAGTAG
Gene >Ophcf2|01048
ATGTTTCTCGTGGCCGGCATCCGTCAGGGCCCCGCGCGGCTCACGCAGCTGTCCAAGACTGCAGTCAGGACCTTG
CAGAGGCCATCTTCGACCTCGGCCACGGTCCGCCCTCGAATCGCCTTCCAGGCCGCGTCTCGCAACGCCTTCTCC
CGCGCGGGCGCTGGCAAGCGTGCCTACCACGATGATGCGCTCAGCCGGCAGCAGTTTGGGGCCGACGGCTCCGGT
ATGCGCAAGCTGCTGATCGGCGGTGCCATCTTCGGAGGCACACTGCTGGCCGTCAACGCCGTTTTCAACCGCGAG
ACGCGCGACGATGGAGGCATGCCTCACTACGAGCGCGAGTACCTCAACAGCACTTTTCTCCATACGGGCCTCGGC
ATCGGCATCATCGGCTTGACGGCGAGGCAGATGGTTAGGACGGGCTTCGTCTATAGACTGATGGTCACGAATCCT
TGGGTGGTCTGCATCGGTGGTCTCGCCCTCAGCTTCGGCACCATGATTGGAACCAGGTCCATCAGCCCTGACAAG
TAGGTGGTTACCGGGGGAGAGCAGGGGAGAGTTGAGAGAGGTCGCTGACGAGCCTTGCAGCTACATCCCCAAATA
CGCCTGCTGGGTGGCCTTTAACGCGACGCAAGCTGCTTTCGTCGCTCCGCTGCTCGCCTTTGTGCCAATGCCGTT
GTTGGCCCGCGCCGGCCTCTACACCGTCGGCGTCATGGGAGCCCTGTCGGTGGTGGGCGCGACGGCCAAGCAGGA
GAAGTACCTCTACATCGGCGGTCCTCTCTTGGCGGGAGCCGCCGTTGTAGCCCTGTCTGGTCTGGCGCCCATGGT
GCTGCCCGTGACGGCGGTGCGCACGCTGGCCTTCACCGACAAGCTGTGGCTGTACGGCGGGCTGGCCGTCTTTGG
CGGCTTCACGCTGTACGATGTGCAGAAGGTGCTGCACCACGCGCGACTGGCGCAGGCCGGCATGATGAGACGCGA
TGCCGTCAACGAGAGCATCTCTCTGGAGCTGGACTTTTTGAACATTTTCATTCGCCTTGTACAGATCTTGATGAT
GAATCAGGGCAGGAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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