Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01028
Gene name
Locationscaffold_01:3843064..3843965
Strand+
Gene length (bp)901
Transcript length (bp)726
Coding sequence length (bp)726
Protein length (aa) 242

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 65 87 22
2 97 119 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01028
MACLGPVSFRAMASRRLLRQLVSRLVRRSASTTSGAKLLAAKQQTFRIPAQVLIYHAGSGRTAFLGVVRLTSLFV
AVFFVFLIGPAYIRAEKDVLSTAAMVAGGIIPLTLVTITSSPFVTQMHMHLPNSARLSRRTLERFVRDLPSETMV
TLTTMNFYTAARAARLRAGDLRPAAGTARARLGLVNYVRRRPVAGLRGVNAFFVQPRGKALRPVDGVMRRDLVEG
WIWEAVQSRISHSSRR*
Coding >Ophcf2|01028
ATGGCTTGCCTCGGACCGGTCTCCTTTCGTGCCATGGCATCCCGTCGACTGCTACGACAGCTGGTGAGCCGTCTA
GTGCGCCGATCAGCTTCCACCACCAGCGGTGCGAAGCTACTGGCGGCTAAGCAGCAGACGTTTCGTATACCGGCT
CAGGTTCTCATCTACCACGCTGGATCAGGTCGAACGGCTTTTCTCGGCGTCGTTCGTCTTACGAGCCTATTCGTT
GCCGTCTTTTTCGTCTTCCTTATAGGGCCGGCCTACATTCGAGCTGAGAAGGACGTGCTCTCAACCGCAGCCATG
GTGGCAGGCGGCATCATCCCCCTCACCCTCGTCACAATAACATCCTCCCCCTTCGTAACGCAAATGCACATGCAC
CTCCCCAACAGCGCGCGGCTCTCCCGGCGAACGCTAGAGCGATTCGTTCGGGACCTACCCAGCGAGACGATGGTG
ACGCTCACGACGATGAATTTCTACACGGCGGCGAGGGCGGCGAGGTTACGCGCCGGGGATCTACGCCCTGCGGCG
GGGACGGCGAGGGCGAGGCTCGGGCTCGTCAATTACGTGAGGAGGAGGCCTGTCGCCGGGCTGAGGGGGGTGAAT
GCGTTCTTCGTGCAGCCTAGGGGTAAGGCTTTGAGGCCTGTTGATGGGGTGATGAGGAGGGATTTGGTCGAGGGT
TGGATATGGGAAGCCGTGCAGTCTCGCATCTCGCATTCTTCAAGGCGGTAG
Transcript >Ophcf2|01028
ATGGCTTGCCTCGGACCGGTCTCCTTTCGTGCCATGGCATCCCGTCGACTGCTACGACAGCTGGTGAGCCGTCTA
GTGCGCCGATCAGCTTCCACCACCAGCGGTGCGAAGCTACTGGCGGCTAAGCAGCAGACGTTTCGTATACCGGCT
CAGGTTCTCATCTACCACGCTGGATCAGGTCGAACGGCTTTTCTCGGCGTCGTTCGTCTTACGAGCCTATTCGTT
GCCGTCTTTTTCGTCTTCCTTATAGGGCCGGCCTACATTCGAGCTGAGAAGGACGTGCTCTCAACCGCAGCCATG
GTGGCAGGCGGCATCATCCCCCTCACCCTCGTCACAATAACATCCTCCCCCTTCGTAACGCAAATGCACATGCAC
CTCCCCAACAGCGCGCGGCTCTCCCGGCGAACGCTAGAGCGATTCGTTCGGGACCTACCCAGCGAGACGATGGTG
ACGCTCACGACGATGAATTTCTACACGGCGGCGAGGGCGGCGAGGTTACGCGCCGGGGATCTACGCCCTGCGGCG
GGGACGGCGAGGGCGAGGCTCGGGCTCGTCAATTACGTGAGGAGGAGGCCTGTCGCCGGGCTGAGGGGGGTGAAT
GCGTTCTTCGTGCAGCCTAGGGGTAAGGCTTTGAGGCCTGTTGATGGGGTGATGAGGAGGGATTTGGTCGAGGGT
TGGATATGGGAAGCCGTGCAGTCTCGCATCTCGCATTCTTCAAGGCGGTAG
Gene >Ophcf2|01028
ATGGCTTGCCTCGGACCGGTCTCCTTTCGTGCCATGGCATCCCGTCGACTGCTACGACAGCTGGTGAGCCGTCTA
GTGCGCCGATCAGCTTCCACCACCAGCGGTGCGAAGCTACTGGCGGCTAAGCAGCAGACGTTTCGTGCGTTTATA
TCAACAACCCGTGTGTCGAAACCGCGGATGAGGAGTTGATGAGAGCTGATGATGATGGGGGTGGATTGAATAGGT
ATACCGGCTCAGGTTCTCATCTACCACGCTGGATCAGGTCGAACGGCTTTTCTCGGCGTCGTTCGTCTTACGAGC
CTATTCGTTGCCGTCTTTTTCGTCTTCCTTATAGGGCCGGCCTACATTCGAGCTGAGAAGGACGTGCTCTCAACC
GCAGCCAGTTCGTCCCATACCCAAGCCCTTTCAAGATGAAACGAAAAAAAAAAAAAAATTCAAAAAATTAATAGA
AGAGTGCTGATGAGTAAAAGTAGTGGTGGCAGGCGGCATCATCCCCCTCACCCTCGTCACAATAACATCCTCCCC
CTTCGTAACGCAAATGCACATGCACCTCCCCAACAGCGCGCGGCTCTCCCGGCGAACGCTAGAGCGATTCGTTCG
GGACCTACCCAGCGAGACGATGGTGACGCTCACGACGATGAATTTCTACACGGCGGCGAGGGCGGCGAGGTTACG
CGCCGGGGATCTACGCCCTGCGGCGGGGACGGCGAGGGCGAGGCTCGGGCTCGTCAATTACGTGAGGAGGAGGCC
TGTCGCCGGGCTGAGGGGGGTGAATGCGTTCTTCGTGCAGCCTAGGGGTAAGGCTTTGAGGCCTGTTGATGGGGT
GATGAGGAGGGATTTGGTCGAGGGTTGGATATGGGAAGCCGTGCAGTCTCGCATCTCGCATTCTTCAAGGCGGTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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