Protein ID | Ophcf2|01010 |
Gene name | |
Location | scaffold_01:3804494..3805830 |
Strand | + |
Gene length (bp) | 1336 |
Transcript length (bp) | 1167 |
Coding sequence length (bp) | 1167 |
Protein length (aa) | 389 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 69 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 44 | 66 | 22 |
2 | 73 | 92 | 19 |
3 | 112 | 134 | 22 |
4 | 155 | 177 | 22 |
5 | 199 | 221 | 22 |
6 | 242 | 261 | 19 |
7 | 281 | 303 | 22 |
8 | 310 | 329 | 19 |
9 | 333 | 355 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01010 MSDKKSDDFVVRVPEISLSRADEKLPLAADGRSMSMLSSVESSGGISVAAYCLSSISMTLVNKYVVSGNQWNLHL LYLAIQSVVGTVTILVCKQAGLIKDLDPFDTRRAKKWFPISLLLVGMIFTGNKALQFLSVPVYTIFKNLTIIVIA YGEMLWFGGSVSPLSLVSFVLMVSSSMLAAWADFHSVRTDSSGAAHRAATAAATATLSTGYAWMGLNVMCSALYV LSMRKAIKITNLKNWDVMFYNNLLTIPVLVLSSLMIEDWSGANLARNFPPATRQNLMVGMVYSGLAAIFISYCTA WCIRATSSTTYAMAGALNKLPMAVAGLVFFSDPVTFGSVSAIFLGFVSGLIYTWAKNRKSRQAGLPTAVSRAASG TLSPHEKAEAAKD* |
Coding | >Ophcf2|01010 ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG CTGTACCTGGCCATCCAGTCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGAT CTCGACCCCTTTGACACGAGGAGAGCCAAAAAGTGGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACG GGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCGTCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCA TACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCAGCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGC TCGATGCTGGCGGCCTGGGCCGACTTTCACAGCGTCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACT GCCGCCGCCACGGCGACGCTGAGCACGGGCTACGCCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTT CTGAGTATGCGCAAGGCCATCAAGATAACCAACCTCAAGAACTGGGACGTCATGTTCTACAACAACCTGCTGACC ATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCTGGCGCGCAACTTCCCCCCG GCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTTCATCTCGTACTGCACGGCC TGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAAGCTGCCCATGGCCGTCGCC GGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCTCGGCTTCGTCAGCGGTCTC ATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGTCAGCCGCGCGGCGTCGGGG ACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA |
Transcript | >Ophcf2|01010 ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG CTGTACCTGGCCATCCAGTCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGAT CTCGACCCCTTTGACACGAGGAGAGCCAAAAAGTGGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACG GGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCGTCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCA TACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCAGCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGC TCGATGCTGGCGGCCTGGGCCGACTTTCACAGCGTCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACT GCCGCCGCCACGGCGACGCTGAGCACGGGCTACGCCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTT CTGAGTATGCGCAAGGCCATCAAGATAACCAACCTCAAGAACTGGGACGTCATGTTCTACAACAACCTGCTGACC ATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCTGGCGCGCAACTTCCCCCCG GCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTTCATCTCGTACTGCACGGCC TGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAAGCTGCCCATGGCCGTCGCC GGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCTCGGCTTCGTCAGCGGTCTC ATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGTCAGCCGCGCGGCGTCGGGG ACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA |
Gene | >Ophcf2|01010 ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG CTGTACCTGGCCATCCAGGTGAGTTGTCCGGCTCCCATCGCTGGCCCACGCTGGCTAACGCCTTGCGCTTTTCAG TCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGATCTCGACCCCTTTGACACG AGGAGAGCCAAAAAGTGTAGGCATCAATGATTCGCCCTTTTCGATCCCTCGATCCCCCGCTGACCCGGAACGCAG GGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACGGGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCG TCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCATACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCA GCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGCTCGATGCTGGCGGCCTGGGCCGACTTTCACAGCG TCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACTGCCGCCGCCACGGCGACGCTGAGCACGGGCTACG CCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTTCTGAGTATGCGCAAGGCCATCAAGATAACCAACC TCAAGAACTGGGACGGTAAGCCGGGCCCGCCCTGGTGGACGGCTGCGCGCTGACGACGGAGAATATAGTCATGTT CTACAACAACCTGCTGACCATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCT GGCGCGCAACTTCCCCCCGGCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTT CATCTCGTACTGCACGGCCTGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAA GCTGCCCATGGCCGTCGCCGGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCT CGGCTTCGTCAGCGGTCTCATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGT CAGCCGCGCGGCGTCGGGGACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA |