Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01010
Gene name
Locationscaffold_01:3804494..3805830
Strand+
Gene length (bp)1336
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 73 92 19
3 112 134 22
4 155 177 22
5 199 221 22
6 242 261 19
7 281 303 22
8 310 329 19
9 333 355 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01010
MSDKKSDDFVVRVPEISLSRADEKLPLAADGRSMSMLSSVESSGGISVAAYCLSSISMTLVNKYVVSGNQWNLHL
LYLAIQSVVGTVTILVCKQAGLIKDLDPFDTRRAKKWFPISLLLVGMIFTGNKALQFLSVPVYTIFKNLTIIVIA
YGEMLWFGGSVSPLSLVSFVLMVSSSMLAAWADFHSVRTDSSGAAHRAATAAATATLSTGYAWMGLNVMCSALYV
LSMRKAIKITNLKNWDVMFYNNLLTIPVLVLSSLMIEDWSGANLARNFPPATRQNLMVGMVYSGLAAIFISYCTA
WCIRATSSTTYAMAGALNKLPMAVAGLVFFSDPVTFGSVSAIFLGFVSGLIYTWAKNRKSRQAGLPTAVSRAASG
TLSPHEKAEAAKD*
Coding >Ophcf2|01010
ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG
CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC
TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG
CTGTACCTGGCCATCCAGTCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGAT
CTCGACCCCTTTGACACGAGGAGAGCCAAAAAGTGGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACG
GGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCGTCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCA
TACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCAGCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGC
TCGATGCTGGCGGCCTGGGCCGACTTTCACAGCGTCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACT
GCCGCCGCCACGGCGACGCTGAGCACGGGCTACGCCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTT
CTGAGTATGCGCAAGGCCATCAAGATAACCAACCTCAAGAACTGGGACGTCATGTTCTACAACAACCTGCTGACC
ATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCTGGCGCGCAACTTCCCCCCG
GCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTTCATCTCGTACTGCACGGCC
TGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAAGCTGCCCATGGCCGTCGCC
GGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCTCGGCTTCGTCAGCGGTCTC
ATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGTCAGCCGCGCGGCGTCGGGG
ACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA
Transcript >Ophcf2|01010
ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG
CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC
TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG
CTGTACCTGGCCATCCAGTCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGAT
CTCGACCCCTTTGACACGAGGAGAGCCAAAAAGTGGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACG
GGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCGTCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCA
TACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCAGCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGC
TCGATGCTGGCGGCCTGGGCCGACTTTCACAGCGTCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACT
GCCGCCGCCACGGCGACGCTGAGCACGGGCTACGCCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTT
CTGAGTATGCGCAAGGCCATCAAGATAACCAACCTCAAGAACTGGGACGTCATGTTCTACAACAACCTGCTGACC
ATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCTGGCGCGCAACTTCCCCCCG
GCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTTCATCTCGTACTGCACGGCC
TGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAAGCTGCCCATGGCCGTCGCC
GGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCTCGGCTTCGTCAGCGGTCTC
ATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGTCAGCCGCGCGGCGTCGGGG
ACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA
Gene >Ophcf2|01010
ATGTCGGATAAGAAGAGCGACGATTTCGTCGTTCGCGTGCCGGAAATCAGCCTTTCGCGCGCCGACGAGAAGCTG
CCGCTGGCTGCCGATGGCCGGTCCATGTCGATGCTTTCGTCGGTTGAGAGCAGCGGCGGCATCTCCGTCGCTGCC
TACTGCCTGTCGTCCATCAGCATGACGCTCGTCAACAAGTACGTCGTGTCGGGGAACCAGTGGAATCTGCATCTG
CTGTACCTGGCCATCCAGGTGAGTTGTCCGGCTCCCATCGCTGGCCCACGCTGGCTAACGCCTTGCGCTTTTCAG
TCTGTCGTTGGTACTGTCACTATCCTCGTCTGCAAGCAGGCCGGCCTCATCAAGGATCTCGACCCCTTTGACACG
AGGAGAGCCAAAAAGTGTAGGCATCAATGATTCGCCCTTTTCGATCCCTCGATCCCCCGCTGACCCGGAACGCAG
GGTTCCCCATCTCGCTGCTGCTAGTCGGCATGATCTTCACGGGCAACAAGGCGCTGCAGTTTCTGTCAGTGCCCG
TCTACACCATCTTCAAGAACCTGACCATCATCGTCATCGCATACGGGGAGATGCTGTGGTTCGGCGGCAGCGTCA
GCCCGCTGAGCCTCGTCTCCTTTGTGTTGATGGTCTCGAGCTCGATGCTGGCGGCCTGGGCCGACTTTCACAGCG
TCCGGACCGATTCTTCGGGCGCTGCTCACAGGGCCGCCACTGCCGCCGCCACGGCGACGCTGAGCACGGGCTACG
CCTGGATGGGCCTCAACGTCATGTGCTCGGCGCTGTACGTTCTGAGTATGCGCAAGGCCATCAAGATAACCAACC
TCAAGAACTGGGACGGTAAGCCGGGCCCGCCCTGGTGGACGGCTGCGCGCTGACGACGGAGAATATAGTCATGTT
CTACAACAACCTGCTGACCATTCCGGTCCTGGTCCTCTCGTCTCTCATGATAGAGGACTGGTCCGGCGCCAACCT
GGCGCGCAACTTCCCCCCGGCGACGCGCCAGAACCTGATGGTCGGCATGGTCTACTCGGGCCTGGCTGCCATCTT
CATCTCGTACTGCACGGCCTGGTGCATCCGCGCCACATCGTCGACGACGTACGCCATGGCCGGCGCCCTCAACAA
GCTGCCCATGGCCGTCGCCGGCCTCGTCTTCTTCTCCGACCCCGTCACGTTCGGCAGCGTGTCGGCCATCTTCCT
CGGCTTCGTCAGCGGTCTCATCTACACGTGGGCCAAGAACAGAAAGTCGCGACAGGCCGGTCTGCCGACGGCCGT
CAGCCGCGCGGCGTCGGGGACGCTGTCGCCGCATGAAAAGGCCGAGGCAGCCAAGGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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