Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00954
Gene name
Locationscaffold_01:3659769..3660912
Strand+
Gene length (bp)1143
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 177 199 22
2 234 256 22
3 275 297 22
4 312 334 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00954
MASWLNRQRKSELLELAESLGMTDVDGLKKTELEVAIDEFIPRHAVALAGRSDLAGYFASRSRALGSPVKRAVTT
TAEESDGGKTSRGSRRRARASVMVAPIEASPAATSSEEESSEKSSVMRTPPPSLSLAPALPATPADVALAVERST
TAMRRRVSMMYRESGLPSASRTARQTLGSVNTVILCVATVELVFIRAEILSDRYAFTVPALPALGTDAYPVSLPD
MFLLLTSSFWIPASTWILTVVLLPCLAGYLFNLRATASPPANEAAVIDPLVYSIAKALVAYIVYGHGATLGLLNL
GAVERLEGAVCGGYRGVLIGTAVTALFSLYDAVLRR*
Coding >Ophcf2|00954
ATGGCGAGCTGGTTGAATAGGCAGCGCAAGAGCGAGCTCTTGGAGCTGGCTGAGAGCCTGGGCATGACTGACGTC
GACGGGCTCAAGAAGACGGAGCTGGAGGTTGCTATTGACGAGTTCATCCCCAGGCATGCTGTTGCTTTGGCGGGG
AGGTCCGATCTCGCTGGCTACTTCGCAAGTCGATCGCGTGCTCTCGGCTCACCCGTCAAACGAGCCGTCACGACA
ACAGCTGAGGAGTCGGACGGGGGGAAGACGTCGAGGGGATCGAGGAGAAGGGCTCGCGCTTCCGTCATGGTCGCT
CCCATTGAAGCCTCTCCCGCAGCGACGAGTTCCGAAGAGGAGAGCAGTGAGAAGAGCTCTGTGATGCGCACTCCG
CCTCCCAGCCTCTCGCTTGCGCCGGCCCTGCCCGCTACGCCCGCGGATGTGGCGCTGGCGGTGGAGCGGTCGACG
ACGGCGATGCGAAGACGCGTCTCGATGATGTATCGCGAGAGTGGCCTTCCCAGCGCATCGCGCACAGCTCGTCAG
ACACTCGGATCGGTAAACACCGTCATCCTCTGCGTCGCCACCGTCGAACTCGTCTTCATCCGCGCAGAGATCCTA
TCCGATCGATACGCCTTTACCGTCCCCGCCCTCCCCGCCTTGGGAACAGACGCCTACCCCGTCAGCCTACCAGAC
ATGTTCCTCCTCCTCACCTCCAGCTTCTGGATCCCCGCCTCGACCTGGATCCTCACCGTCGTCCTCCTCCCCTGT
CTGGCGGGCTACCTCTTCAACCTGCGCGCCACCGCCTCCCCTCCAGCCAACGAGGCGGCCGTCATCGACCCTCTA
GTCTACAGCATAGCAAAAGCCCTCGTCGCCTACATCGTCTACGGCCACGGCGCGACGTTGGGCCTCCTGAACCTC
GGCGCGGTGGAGCGTCTCGAGGGTGCCGTCTGCGGGGGGTATCGCGGCGTGCTTATCGGGACGGCTGTCACGGCC
CTCTTCAGCTTGTACGATGCTGTTCTGAGGCGATGA
Transcript >Ophcf2|00954
ATGGCGAGCTGGTTGAATAGGCAGCGCAAGAGCGAGCTCTTGGAGCTGGCTGAGAGCCTGGGCATGACTGACGTC
GACGGGCTCAAGAAGACGGAGCTGGAGGTTGCTATTGACGAGTTCATCCCCAGGCATGCTGTTGCTTTGGCGGGG
AGGTCCGATCTCGCTGGCTACTTCGCAAGTCGATCGCGTGCTCTCGGCTCACCCGTCAAACGAGCCGTCACGACA
ACAGCTGAGGAGTCGGACGGGGGGAAGACGTCGAGGGGATCGAGGAGAAGGGCTCGCGCTTCCGTCATGGTCGCT
CCCATTGAAGCCTCTCCCGCAGCGACGAGTTCCGAAGAGGAGAGCAGTGAGAAGAGCTCTGTGATGCGCACTCCG
CCTCCCAGCCTCTCGCTTGCGCCGGCCCTGCCCGCTACGCCCGCGGATGTGGCGCTGGCGGTGGAGCGGTCGACG
ACGGCGATGCGAAGACGCGTCTCGATGATGTATCGCGAGAGTGGCCTTCCCAGCGCATCGCGCACAGCTCGTCAG
ACACTCGGATCGGTAAACACCGTCATCCTCTGCGTCGCCACCGTCGAACTCGTCTTCATCCGCGCAGAGATCCTA
TCCGATCGATACGCCTTTACCGTCCCCGCCCTCCCCGCCTTGGGAACAGACGCCTACCCCGTCAGCCTACCAGAC
ATGTTCCTCCTCCTCACCTCCAGCTTCTGGATCCCCGCCTCGACCTGGATCCTCACCGTCGTCCTCCTCCCCTGT
CTGGCGGGCTACCTCTTCAACCTGCGCGCCACCGCCTCCCCTCCAGCCAACGAGGCGGCCGTCATCGACCCTCTA
GTCTACAGCATAGCAAAAGCCCTCGTCGCCTACATCGTCTACGGCCACGGCGCGACGTTGGGCCTCCTGAACCTC
GGCGCGGTGGAGCGTCTCGAGGGTGCCGTCTGCGGGGGGTATCGCGGCGTGCTTATCGGGACGGCTGTCACGGCC
CTCTTCAGCTTGTACGATGCTGTTCTGAGGCGATGA
Gene >Ophcf2|00954
ATGGCGAGCTGGTTGAATAGGCAGCGCAAGAGCGAGCTCTTGGAGCTGGCTGAGAGCCTGGGCATGACTGAGTGC
GCACCCCTTGACGCGCATAATCCACCCCGAAGAGGTAGCAAGCTGATGGCCAGAGCCTCTCGCAGCGTCGACGGG
CTCAAGAAGACGGAGCTGGAGGTTGCTATTGACGAGTTCATCCCCAGGCATGCTGTTGCTTTGGCGGGGAGGTCC
GATCTCGCTGGCTACTTCGCAAGTCGATCGCGTGCTCTCGGCTCACCCGTCAAACGAGCCGTCACGACAACAGCT
GAGGAGTCGGACGGGGGGAAGACGTCGAGGGGATCGAGGAGAAGGGCTCGCGCTTCCGTCATGGTCGCTCCCATT
GAAGCCTCTCCCGCAGCGACGAGTTCCGAGTTCGTTTCCGTTTCCATCCCCCCCCAACGCGAAGACGACTGCTGA
CGCTCTGGTCTCTACAGAGAGGAGAGCAGTGAGAAGAGCTCTGTGATGCGCACTCCGCCTCCCAGCCTCTCGCTT
GCGCCGGCCCTGCCCGCTACGCCCGCGGATGTGGCGCTGGCGGTGGAGCGGTCGACGACGGCGATGCGAAGACGC
GTCTCGATGATGTATCGCGAGAGTGGCCTTCCCAGCGCATCGCGCACAGCTCGTCAGACACTCGGATCGGTAAAC
ACCGTCATCCTCTGCGTCGCCACCGTCGAACTCGTCTTCATCCGCGCAGAGATCCTATCCGATCGATACGCCTTT
ACCGTCCCCGCCCTCCCCGCCTTGGGAACAGACGCCTACCCCGTCAGCCTACCAGACATGTTCCTCCTCCTCACC
TCCAGCTTCTGGATCCCCGCCTCGACCTGGATCCTCACCGTCGTCCTCCTCCCCTGTCTGGCGGGCTACCTCTTC
AACCTGCGCGCCACCGCCTCCCCTCCAGCCAACGAGGCGGCCGTCATCGACCCTCTAGTCTACAGCATAGCAAAA
GCCCTCGTCGCCTACATCGTCTACGGCCACGGCGCGACGTTGGGCCTCCTGAACCTCGGCGCGGTGGAGCGTCTC
GAGGGTGCCGTCTGCGGGGGGTATCGCGGCGTGCTTATCGGGACGGCTGTCACGGCCCTCTTCAGCTTGTACGAT
GCTGTTCTGAGGCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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