Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00946
Gene name
Locationscaffold_01:3636231..3636928
Strand-
Gene length (bp)697
Transcript length (bp)636
Coding sequence length (bp)636
Protein length (aa) 212

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 55 74 19
2 87 109 22
3 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00946
MPDSGTASAPLLPSHARRSDGLSSSAPASGSDLSHRLKRMRAAAASGLSSRRKHFAIMAVVGVDVFALLVEVFIR
LIACETGQGREAWVVITTSVLGTVGLVISCLFMVELMACLLVYGFGYLCSWFHLFDALVIVISFIVDVGLRGVAG
SIGSLVVVLRLWRLAKLSEEVVLGASERMDLLERHLDEIERENKQLRVQLGVEAGHRSSRG*
Coding >Ophcf2|00946
ATGCCCGACTCCGGCACCGCCTCAGCCCCTCTCCTACCGTCTCACGCCCGCCGCTCCGATGGGCTGTCGTCCTCG
GCGCCGGCTTCGGGCTCGGATCTGAGCCACCGCCTGAAGCGAATGCGTGCGGCGGCTGCGAGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCGTTGTCGGCGTCGACGTCTTCGCACTGCTAGTCGAAGTCTTTATCCGG
CTCATTGCTTGCGAGACGGGACAGGGCCGTGAGGCATGGGTGGTAATTACCACTTCTGTACTCGGCACTGTCGGT
CTGGTTATCAGCTGCCTCTTCATGGTCGAGTTGATGGCTTGCTTGCTCGTCTATGGCTTTGGTTATCTCTGCTCC
TGGTTCCACCTATTTGACGCACTCGTCATCGTCATCAGCTTCATAGTCGACGTCGGCCTTCGCGGCGTCGCTGGC
TCTATAGGCTCTCTCGTCGTCGTTCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTCGTCTTGGGGGCA
TCTGAAAGGATGGACTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGTTCAGCTC
GGAGTAGAGGCCGGGCACCGTTCTAGTCGTGGTTGA
Transcript >Ophcf2|00946
ATGCCCGACTCCGGCACCGCCTCAGCCCCTCTCCTACCGTCTCACGCCCGCCGCTCCGATGGGCTGTCGTCCTCG
GCGCCGGCTTCGGGCTCGGATCTGAGCCACCGCCTGAAGCGAATGCGTGCGGCGGCTGCGAGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCGTTGTCGGCGTCGACGTCTTCGCACTGCTAGTCGAAGTCTTTATCCGG
CTCATTGCTTGCGAGACGGGACAGGGCCGTGAGGCATGGGTGGTAATTACCACTTCTGTACTCGGCACTGTCGGT
CTGGTTATCAGCTGCCTCTTCATGGTCGAGTTGATGGCTTGCTTGCTCGTCTATGGCTTTGGTTATCTCTGCTCC
TGGTTCCACCTATTTGACGCACTCGTCATCGTCATCAGCTTCATAGTCGACGTCGGCCTTCGCGGCGTCGCTGGC
TCTATAGGCTCTCTCGTCGTCGTTCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTCGTCTTGGGGGCA
TCTGAAAGGATGGACTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGTTCAGCTC
GGAGTAGAGGCCGGGCACCGTTCTAGTCGTGGTTGA
Gene >Ophcf2|00946
ATGCCCGACTCCGGCACCGCCTCAGCCCCTCTCCTACCGTCTCACGCCCGCCGCTCCGATGGGCTGTCGTCCTCG
GCGCCGGCTTCGGGCTCGGATCTGAGCCACCGCCTGAAGCGAATGCGTGCGGCGGCTGCGAGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCGTTGTCGGCGTCGACGTCTTCGCACTGCTAGTCGAAGTCTTTATCCGG
CTCATTGCTTGCGAGACGGGACAGGGCCGTGAGGCATGGGTGGTAATTACCACTTCTGTACTCGGCACTGTCGGT
CTGGTTATCAGCTGCCTCTTCATGGTCGAGTTGATGGCTTGCTTGCTCGTCTATGGCTTTGGGTAATGGCTTCCA
TCTCTCCGTATCATACCGCTTCGTGCTGCTGACTCGAGTCTTGACAAGTTATCTCTGCTCCTGGTTCCACCTATT
TGACGCACTCGTCATCGTCATCAGCTTCATAGTCGACGTCGGCCTTCGCGGCGTCGCTGGCTCTATAGGCTCTCT
CGTCGTCGTTCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTCGTCTTGGGGGCATCTGAAAGGATGGA
CTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGTTCAGCTCGGAGTAGAGGCCGG
GCACCGTTCTAGTCGTGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail