Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00942
Gene name
Locationscaffold_01:3631486..3632596
Strand+
Gene length (bp)1110
Transcript length (bp)1056
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 1.8E-11 77 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00942
MMLHTLVLHIRLFLSVILAIFFFLILHDASRRGFTWTVAHKMATQTTASTLLQRLPAAHSNLPTIFHQSWMTTEL
PVKFQRWSSTCRQAHPRWEWVIWTDDDNLRLVKRFFPSLEITYRRLPGEIYRADLSRALYMYIYGGVYADLDTEC
LRPTEQLKTSYPTFFDNRLKAKALFGRMGIDPDFVHSIPNAWMASTPGHPFFLHFLQTIDDRTRDITTNNKSWPS
AEALTGPVALREAIAKYEEEKVRRGSRLKDRVAQLVRDGPFDESDYEDEQDHRVFLLPSSVVYSYSWWADGESVR
PVCWVLSEGFDAERCKQLLQVGRAKSISITYWSHTHTPTGHSDDNLKHIQG*
Coding >Ophcf2|00942
ATGATGCTCCATACGCTCGTTCTTCACATCAGGCTGTTTCTCTCCGTCATCCTCGCCATCTTCTTCTTCCTGATT
CTCCATGACGCCTCGCGTAGGGGCTTCACCTGGACTGTCGCCCACAAAATGGCCACACAGACGACGGCATCGACC
CTCCTCCAACGTCTACCAGCAGCGCACTCCAACCTCCCGACCATCTTCCACCAGAGCTGGATGACGACGGAACTG
CCGGTCAAGTTTCAACGCTGGAGTTCCACCTGTCGTCAGGCTCACCCGCGGTGGGAATGGGTTATCTGGACCGAT
GACGATAACTTACGGCTCGTTAAGAGATTCTTCCCCTCGCTCGAGATCACCTATCGTCGTCTTCCGGGAGAGATC
TACCGCGCCGATCTCAGCAGGGCTCTCTACATGTACATCTATGGCGGCGTCTACGCTGACCTCGACACAGAATGC
CTGCGGCCGACGGAGCAACTAAAGACCTCCTATCCGACCTTTTTCGACAACCGTCTCAAGGCAAAGGCCCTGTTC
GGCCGGATGGGGATAGACCCGGACTTTGTCCACTCCATCCCCAACGCCTGGATGGCATCAACCCCGGGCCATCCG
TTCTTCCTGCACTTCCTTCAGACCATCGACGACCGGACGCGCGACATTACAACCAACAACAAGTCGTGGCCCAGT
GCTGAAGCGCTGACGGGGCCTGTTGCTCTACGCGAAGCCATCGCCAAGTATGAGGAGGAAAAGGTGCGCCGAGGC
AGTCGATTGAAGGACCGCGTCGCCCAGCTCGTCAGGGATGGACCCTTTGATGAATCCGACTACGAAGACGAACAA
GACCACCGCGTCTTCCTCCTCCCCAGCAGCGTCGTCTATTCTTATAGCTGGTGGGCTGACGGCGAGTCTGTGCGT
CCAGTCTGCTGGGTTCTGAGCGAAGGCTTCGACGCCGAGAGATGTAAACAACTGCTCCAAGTTGGCCGGGCCAAG
AGCATATCCATCACTTACTGGAGTCACACGCACACGCCGACGGGGCACAGCGATGATAACCTGAAGCACATCCAG
GGGTGA
Transcript >Ophcf2|00942
ATGATGCTCCATACGCTCGTTCTTCACATCAGGCTGTTTCTCTCCGTCATCCTCGCCATCTTCTTCTTCCTGATT
CTCCATGACGCCTCGCGTAGGGGCTTCACCTGGACTGTCGCCCACAAAATGGCCACACAGACGACGGCATCGACC
CTCCTCCAACGTCTACCAGCAGCGCACTCCAACCTCCCGACCATCTTCCACCAGAGCTGGATGACGACGGAACTG
CCGGTCAAGTTTCAACGCTGGAGTTCCACCTGTCGTCAGGCTCACCCGCGGTGGGAATGGGTTATCTGGACCGAT
GACGATAACTTACGGCTCGTTAAGAGATTCTTCCCCTCGCTCGAGATCACCTATCGTCGTCTTCCGGGAGAGATC
TACCGCGCCGATCTCAGCAGGGCTCTCTACATGTACATCTATGGCGGCGTCTACGCTGACCTCGACACAGAATGC
CTGCGGCCGACGGAGCAACTAAAGACCTCCTATCCGACCTTTTTCGACAACCGTCTCAAGGCAAAGGCCCTGTTC
GGCCGGATGGGGATAGACCCGGACTTTGTCCACTCCATCCCCAACGCCTGGATGGCATCAACCCCGGGCCATCCG
TTCTTCCTGCACTTCCTTCAGACCATCGACGACCGGACGCGCGACATTACAACCAACAACAAGTCGTGGCCCAGT
GCTGAAGCGCTGACGGGGCCTGTTGCTCTACGCGAAGCCATCGCCAAGTATGAGGAGGAAAAGGTGCGCCGAGGC
AGTCGATTGAAGGACCGCGTCGCCCAGCTCGTCAGGGATGGACCCTTTGATGAATCCGACTACGAAGACGAACAA
GACCACCGCGTCTTCCTCCTCCCCAGCAGCGTCGTCTATTCTTATAGCTGGTGGGCTGACGGCGAGTCTGTGCGT
CCAGTCTGCTGGGTTCTGAGCGAAGGCTTCGACGCCGAGAGATGTAAACAACTGCTCCAAGTTGGCCGGGCCAAG
AGCATATCCATCACTTACTGGAGTCACACGCACACGCCGACGGGGCACAGCGATGATAACCTGAAGCACATCCAG
GGGTGA
Gene >Ophcf2|00942
ATGATGCTCCATACGCTCGTTCTTCACATCAGGCTGTTTCTCTCCGTCATCCTCGCCATCTTCTTCTTCCTGATT
CTCCATGACGCCTCGCGTAGGGGCTTCACCTGGACTGTCGCCCACAAAATGGCCACACAGACGACGGCATCGACC
CTCCTCCAACGTCTACCAGCAGCGCACTCCAACCTCCCGACCATCTTCCACCAGAGCTGGATGACGACGGAACTG
CCGGTCAAGTTTCAACGCTGGAGTTCCACCTGTCGTCAGGCTCACCCGCGGTGGGAATGGGTTATCTGGACCGAT
GACGATAACTTACGGCTCGTTAAGAGATTCTTCCCCTCGCTCGAGATCACCTATCGTCGTCTTCCGGGAGAGATC
TACCGCGCCGATCTCAGCAGGGCTCTCTACATGTACATCTATGGCGGGTGCGTTTTCAGCCGTCGTCGGGCCTGG
AGACAGCTTACTGACGCCAGATACAGCGTCTACGCTGACCTCGACACAGAATGCCTGCGGCCGACGGAGCAACTA
AAGACCTCCTATCCGACCTTTTTCGACAACCGTCTCAAGGCAAAGGCCCTGTTCGGCCGGATGGGGATAGACCCG
GACTTTGTCCACTCCATCCCCAACGCCTGGATGGCATCAACCCCGGGCCATCCGTTCTTCCTGCACTTCCTTCAG
ACCATCGACGACCGGACGCGCGACATTACAACCAACAACAAGTCGTGGCCCAGTGCTGAAGCGCTGACGGGGCCT
GTTGCTCTACGCGAAGCCATCGCCAAGTATGAGGAGGAAAAGGTGCGCCGAGGCAGTCGATTGAAGGACCGCGTC
GCCCAGCTCGTCAGGGATGGACCCTTTGATGAATCCGACTACGAAGACGAACAAGACCACCGCGTCTTCCTCCTC
CCCAGCAGCGTCGTCTATTCTTATAGCTGGTGGGCTGACGGCGAGTCTGTGCGTCCAGTCTGCTGGGTTCTGAGC
GAAGGCTTCGACGCCGAGAGATGTAAACAACTGCTCCAAGTTGGCCGGGCCAAGAGCATATCCATCACTTACTGG
AGTCACACGCACACGCCGACGGGGCACAGCGATGATAACCTGAAGCACATCCAGGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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