© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|00925 |
| Gene name | |
| Location | scaffold_01:3509453..3510866 |
| Strand | + |
| Gene length (bp) | 1413 |
| Transcript length (bp) | 1350 |
| Coding sequence length (bp) | 1350 |
| Protein length (aa) | 450 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16983 | MFS_MOT1 | Molybdate transporter of MFS superfamily | 2.2E-25 | 26 | 142 |
| PF16983 | MFS_MOT1 | Molybdate transporter of MFS superfamily | 1.7E-35 | 232 | 350 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015689 | molybdate ion transport | Yes |
| GO:0015098 | molybdate ion transmembrane transporter activity | Yes |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006820 | anion transport | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| GO:0015698 | inorganic anion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lysosome/Vacuole | Signal peptide|Peroxisomal targeting signal | 0.1205 | 0.1019 | 0.1097 | 0.0924 | 0.2126 | 0.0236 | 0.3687 | 0.8671 | 0.4995 | 0.6641 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 55 | 77 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 134 | 156 | 22 |
| 5 | 183 | 202 | 19 |
| 6 | 231 | 253 | 22 |
| 7 | 266 | 286 | 20 |
| 8 | 301 | 323 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 1846 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|00925 MLSAWLARLRRVNRHNLVTFRRAPIAEISGSLGDLGTLLPLMIALAVDGYIQLGATLVFSGLFNILTGLTFGIPL PVQPMKAIASAAISGRENPSMGVVAAAGQWVAIAVLFMSVTGLLRWAAHVVPVPVVKGIQLGAGLSLILGAGTSL LQPLGWVRPVLDNRVWALFAFLVLIATQRWSRFPYALCFFLLAMVFALITVLSSEGSLPRFHFWHPRHVMPRWLG RHDAPALWMAIGQLPLTTLNSIIAVCALAADLLPDLPQPTVTAVGLSVALMNLSGTWFGAMPVCHGAGGLAAQYR FGARSGASVIFLGLVKLVLGLVFGETLVDVLRGYPKSLLGIMVLAAGLELAKVGHSLNQGASDLWRNAADGDGSS SMARRHRDLGEDERLERWTVMLMTTAGILAFRNDAVGFLAGMLCHGAYRLSPWLSKRISGGSGRSTEVDPLLRR* |
| Coding | >Ophcf2|00925 ATGCTGTCTGCGTGGCTGGCTCGTCTCCGCCGCGTCAACCGGCACAACCTCGTCACCTTTCGCCGCGCGCCCATC GCCGAAATCTCAGGCTCTCTCGGCGATCTCGGCACGCTGCTGCCGCTCATGATCGCCCTCGCCGTCGATGGCTAC ATCCAGCTCGGCGCGACCCTAGTCTTTTCTGGCCTTTTCAACATCCTCACCGGTCTGACCTTTGGCATCCCCCTT CCCGTCCAGCCCATGAAGGCTATAGCTTCGGCAGCCATCTCTGGTCGCGAGAATCCGTCCATGGGCGTCGTCGCC GCCGCCGGCCAGTGGGTCGCCATCGCGGTGCTGTTCATGAGCGTCACCGGCCTACTGCGTTGGGCCGCACACGTC GTGCCCGTGCCTGTCGTCAAGGGCATCCAGCTCGGCGCCGGCCTGTCTCTGATTCTCGGCGCCGGGACGTCCCTT CTGCAGCCCCTGGGTTGGGTGCGCCCCGTGCTGGACAACCGGGTCTGGGCCTTGTTCGCCTTCCTCGTGCTCATC GCCACTCAGCGGTGGTCCCGCTTCCCCTATGCGCTATGCTTCTTTCTCCTCGCCATGGTGTTCGCCCTTATCACC GTCCTATCGTCCGAGGGCTCTCTACCTCGTTTCCACTTCTGGCATCCTCGCCATGTCATGCCCAGGTGGCTGGGT CGTCACGACGCACCAGCTCTGTGGATGGCCATCGGACAGCTACCTCTGACGACACTCAACTCCATCATCGCCGTC TGCGCTCTTGCCGCCGATCTCCTCCCTGACCTGCCTCAGCCGACCGTCACAGCTGTTGGTCTGAGCGTCGCTCTG ATGAATCTCTCCGGCACGTGGTTTGGAGCCATGCCCGTTTGCCACGGGGCGGGAGGGCTCGCCGCTCAGTACCGC TTCGGGGCGCGCAGCGGGGCCAGCGTCATCTTTCTTGGTCTCGTTAAGCTCGTGCTGGGCCTGGTTTTTGGCGAG ACGCTCGTCGACGTGCTTCGCGGGTACCCCAAGAGCCTTCTAGGCATCATGGTCCTTGCTGCCGGCCTTGAACTG GCCAAGGTCGGTCACTCGCTCAACCAGGGCGCTTCTGACCTGTGGCGGAACGCGGCCGATGGCGACGGCTCCTCA TCCATGGCGAGGAGGCACCGCGACCTCGGCGAGGATGAGCGGCTCGAGAGGTGGACTGTGATGCTCATGACGACG GCGGGTATCTTGGCCTTTCGCAACGACGCCGTCGGCTTTCTCGCCGGCATGCTGTGCCACGGAGCCTACAGGCTT TCACCCTGGCTGTCGAAGCGCATCTCTGGAGGCTCGGGCCGATCTACCGAGGTGGACCCGTTGCTGCGGAGGTGA |
| Transcript | >Ophcf2|00925 ATGCTGTCTGCGTGGCTGGCTCGTCTCCGCCGCGTCAACCGGCACAACCTCGTCACCTTTCGCCGCGCGCCCATC GCCGAAATCTCAGGCTCTCTCGGCGATCTCGGCACGCTGCTGCCGCTCATGATCGCCCTCGCCGTCGATGGCTAC ATCCAGCTCGGCGCGACCCTAGTCTTTTCTGGCCTTTTCAACATCCTCACCGGTCTGACCTTTGGCATCCCCCTT CCCGTCCAGCCCATGAAGGCTATAGCTTCGGCAGCCATCTCTGGTCGCGAGAATCCGTCCATGGGCGTCGTCGCC GCCGCCGGCCAGTGGGTCGCCATCGCGGTGCTGTTCATGAGCGTCACCGGCCTACTGCGTTGGGCCGCACACGTC GTGCCCGTGCCTGTCGTCAAGGGCATCCAGCTCGGCGCCGGCCTGTCTCTGATTCTCGGCGCCGGGACGTCCCTT CTGCAGCCCCTGGGTTGGGTGCGCCCCGTGCTGGACAACCGGGTCTGGGCCTTGTTCGCCTTCCTCGTGCTCATC GCCACTCAGCGGTGGTCCCGCTTCCCCTATGCGCTATGCTTCTTTCTCCTCGCCATGGTGTTCGCCCTTATCACC GTCCTATCGTCCGAGGGCTCTCTACCTCGTTTCCACTTCTGGCATCCTCGCCATGTCATGCCCAGGTGGCTGGGT CGTCACGACGCACCAGCTCTGTGGATGGCCATCGGACAGCTACCTCTGACGACACTCAACTCCATCATCGCCGTC TGCGCTCTTGCCGCCGATCTCCTCCCTGACCTGCCTCAGCCGACCGTCACAGCTGTTGGTCTGAGCGTCGCTCTG ATGAATCTCTCCGGCACGTGGTTTGGAGCCATGCCCGTTTGCCACGGGGCGGGAGGGCTCGCCGCTCAGTACCGC TTCGGGGCGCGCAGCGGGGCCAGCGTCATCTTTCTTGGTCTCGTTAAGCTCGTGCTGGGCCTGGTTTTTGGCGAG ACGCTCGTCGACGTGCTTCGCGGGTACCCCAAGAGCCTTCTAGGCATCATGGTCCTTGCTGCCGGCCTTGAACTG GCCAAGGTCGGTCACTCGCTCAACCAGGGCGCTTCTGACCTGTGGCGGAACGCGGCCGATGGCGACGGCTCCTCA TCCATGGCGAGGAGGCACCGCGACCTCGGCGAGGATGAGCGGCTCGAGAGGTGGACTGTGATGCTCATGACGACG GCGGGTATCTTGGCCTTTCGCAACGACGCCGTCGGCTTTCTCGCCGGCATGCTGTGCCACGGAGCCTACAGGCTT TCACCCTGGCTGTCGAAGCGCATCTCTGGAGGCTCGGGCCGATCTACCGAGGTGGACCCGTTGCTGCGGAGGTGA |
| Gene | >Ophcf2|00925 ATGCTGTCTGCGTGGCTGGCTCGTCTCCGCCGCGTCAACCGGCACAACCTCGTCACCTTTCGCCGCGCGCCCATC GCCGAAATCTCAGGCTCTCTCGGCGATCTCGGCACGCTGCTGCCGCTCATGATCGCCCTCGCCGTCGATGGCTAC ATCCAGCTCGGCGCGACCCTAGTCTTTTCTGGCCTTTTCAACATCCTCACCGGTCTGACCTTTGGCATCCCCCTT CCCGTCCAGCCCATGAAGGTGAGAGAAGCTACCTGGGCGTCGTCATCGTCGGCGAGCGAGCGGCTGAGTTCTATC ACGTAGGCTATAGCTTCGGCAGCCATCTCTGGTCGCGAGAATCCGTCCATGGGCGTCGTCGCCGCCGCCGGCCAG TGGGTCGCCATCGCGGTGCTGTTCATGAGCGTCACCGGCCTACTGCGTTGGGCCGCACACGTCGTGCCCGTGCCT GTCGTCAAGGGCATCCAGCTCGGCGCCGGCCTGTCTCTGATTCTCGGCGCCGGGACGTCCCTTCTGCAGCCCCTG GGTTGGGTGCGCCCCGTGCTGGACAACCGGGTCTGGGCCTTGTTCGCCTTCCTCGTGCTCATCGCCACTCAGCGG TGGTCCCGCTTCCCCTATGCGCTATGCTTCTTTCTCCTCGCCATGGTGTTCGCCCTTATCACCGTCCTATCGTCC GAGGGCTCTCTACCTCGTTTCCACTTCTGGCATCCTCGCCATGTCATGCCCAGGTGGCTGGGTCGTCACGACGCA CCAGCTCTGTGGATGGCCATCGGACAGCTACCTCTGACGACACTCAACTCCATCATCGCCGTCTGCGCTCTTGCC GCCGATCTCCTCCCTGACCTGCCTCAGCCGACCGTCACAGCTGTTGGTCTGAGCGTCGCTCTGATGAATCTCTCC GGCACGTGGTTTGGAGCCATGCCCGTTTGCCACGGGGCGGGAGGGCTCGCCGCTCAGTACCGCTTCGGGGCGCGC AGCGGGGCCAGCGTCATCTTTCTTGGTCTCGTTAAGCTCGTGCTGGGCCTGGTTTTTGGCGAGACGCTCGTCGAC GTGCTTCGCGGGTACCCCAAGAGCCTTCTAGGCATCATGGTCCTTGCTGCCGGCCTTGAACTGGCCAAGGTCGGT CACTCGCTCAACCAGGGCGCTTCTGACCTGTGGCGGAACGCGGCCGATGGCGACGGCTCCTCATCCATGGCGAGG AGGCACCGCGACCTCGGCGAGGATGAGCGGCTCGAGAGGTGGACTGTGATGCTCATGACGACGGCGGGTATCTTG GCCTTTCGCAACGACGCCGTCGGCTTTCTCGCCGGCATGCTGTGCCACGGAGCCTACAGGCTTTCACCCTGGCTG TCGAAGCGCATCTCTGGAGGCTCGGGCCGATCTACCGAGGTGGACCCGTTGCTGCGGAGGTGA |