Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00919
Gene name
Locationscaffold_01:3491487..3492423
Strand-
Gene length (bp)936
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01040 UbiA UbiA prenyltransferase family 2.9E-22 61 297

GO

GO Term Description Terminal node
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0003824 catalytic activity No
GO:0031224 intrinsic component of membrane No
GO:0003674 molecular_function No
GO:0110165 cellular anatomical entity No
GO:0016740 transferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 66 85 19
3 116 138 22
4 166 185 19
5 197 214 17
6 261 283 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00919
MVAASKPPEHWLRRLWRYTTSTAYTAWLFTRSDVKTILVPTAIFGVCNYLALPAYGLEPDVGSRLSSRFGLVFFW
IWIHLVSFNVDNQRSPESVREDALNKPWRPLPSGRVSLRAAYLLSMLMPPVTVVCSLLVGTGWRQSLGIVLLTSW
YNRWGGSDTNPLTRNAITGFGYMCFTSGALEVAYGKALPLDGSNRQLMVWLCVLGAIVTTTMHVQDMEDQEGDGQ
RGRRTAPLVLGDGPCRWTIALPMVGWAVACPSIWRPALPMAGVSTALALTVALRTLILRRESSDRRTFWVWNAWM
SSLYMMPLFSR*
Coding >Ophcf2|00919
ATGGTCGCAGCATCGAAACCGCCGGAGCACTGGCTGCGGCGTCTCTGGCGGTACACGACCTCGACAGCTTACACT
GCCTGGCTCTTCACCCGCTCAGACGTCAAGACGATCCTGGTTCCCACAGCCATCTTCGGCGTCTGTAACTATCTG
GCCCTCCCCGCCTACGGTCTGGAGCCAGACGTCGGATCAAGACTCAGCTCCAGATTCGGTCTCGTCTTCTTCTGG
ATCTGGATTCATCTCGTCTCCTTCAACGTCGACAACCAGCGAAGCCCAGAGTCCGTCCGCGAAGACGCGCTGAAC
AAGCCATGGCGTCCGCTGCCGTCCGGCCGCGTCTCCCTACGCGCCGCCTACCTTCTCAGCATGCTCATGCCCCCG
GTCACAGTGGTCTGCAGTCTCCTTGTAGGCACCGGGTGGCGGCAGTCTCTCGGGATAGTCCTCCTAACCTCGTGG
TACAACCGCTGGGGAGGATCGGACACGAACCCTCTGACGCGCAACGCCATCACCGGATTCGGCTACATGTGCTTC
ACGTCGGGGGCGCTCGAGGTGGCGTACGGAAAGGCGCTGCCTCTGGATGGTAGTAATCGACAGCTGATGGTGTGG
CTGTGCGTCCTGGGCGCCATCGTGACGACGACGATGCACGTGCAAGACATGGAGGATCAGGAGGGAGACGGCCAG
CGAGGAAGAAGAACGGCGCCTCTGGTGCTGGGCGATGGGCCATGTCGGTGGACGATTGCGCTGCCAATGGTCGGC
TGGGCCGTTGCCTGCCCGTCCATCTGGAGGCCGGCTCTGCCGATGGCGGGTGTGAGCACTGCTCTGGCGCTGACG
GTGGCGTTGAGGACGCTGATTTTGAGGCGGGAGAGTTCGGATCGGCGGACGTTTTGGGTGTGGAACGCGTGGATG
AGCTCGCTGTACATGATGCCTTTGTTTAGCCGATGA
Transcript >Ophcf2|00919
ATGGTCGCAGCATCGAAACCGCCGGAGCACTGGCTGCGGCGTCTCTGGCGGTACACGACCTCGACAGCTTACACT
GCCTGGCTCTTCACCCGCTCAGACGTCAAGACGATCCTGGTTCCCACAGCCATCTTCGGCGTCTGTAACTATCTG
GCCCTCCCCGCCTACGGTCTGGAGCCAGACGTCGGATCAAGACTCAGCTCCAGATTCGGTCTCGTCTTCTTCTGG
ATCTGGATTCATCTCGTCTCCTTCAACGTCGACAACCAGCGAAGCCCAGAGTCCGTCCGCGAAGACGCGCTGAAC
AAGCCATGGCGTCCGCTGCCGTCCGGCCGCGTCTCCCTACGCGCCGCCTACCTTCTCAGCATGCTCATGCCCCCG
GTCACAGTGGTCTGCAGTCTCCTTGTAGGCACCGGGTGGCGGCAGTCTCTCGGGATAGTCCTCCTAACCTCGTGG
TACAACCGCTGGGGAGGATCGGACACGAACCCTCTGACGCGCAACGCCATCACCGGATTCGGCTACATGTGCTTC
ACGTCGGGGGCGCTCGAGGTGGCGTACGGAAAGGCGCTGCCTCTGGATGGTAGTAATCGACAGCTGATGGTGTGG
CTGTGCGTCCTGGGCGCCATCGTGACGACGACGATGCACGTGCAAGACATGGAGGATCAGGAGGGAGACGGCCAG
CGAGGAAGAAGAACGGCGCCTCTGGTGCTGGGCGATGGGCCATGTCGGTGGACGATTGCGCTGCCAATGGTCGGC
TGGGCCGTTGCCTGCCCGTCCATCTGGAGGCCGGCTCTGCCGATGGCGGGTGTGAGCACTGCTCTGGCGCTGACG
GTGGCGTTGAGGACGCTGATTTTGAGGCGGGAGAGTTCGGATCGGCGGACGTTTTGGGTGTGGAACGCGTGGATG
AGCTCGCTGTACATGATGCCTTTGTTTAGCCGATGA
Gene >Ophcf2|00919
ATGGTCGCAGCATCGAAACCGCCGGAGCACTGGCTGCGGCGTCTCTGGCGGTACACGACCTCGACAGCTTACACT
GCCTGGCTCTTCACCCGCTCAGACGTCAAGACGATCCTGGTTCCCACAGCCATCTTCGGCGTCTGTAACTATCTG
GCCCTCCCCGCCTACGGTCTGGAGCCAGACGTCGGATCAAGACTCAGCTCCAGATTCGGTCTCGTCTTCTTCTGG
ATCTGGATTCATCTCGTCTCCTTCAACGTCGACAACCAGCGAAGCCCAGAGTCCGTCCGCGAAGACGCGCTGAAC
AAGCCATGGCGTCCGCTGCCGTCCGGCCGCGTCTCCCTACGCGCCGCCTACCTTCTCAGCATGCTCATGCCCCCG
GTCACAGTGGTCTGCAGTCTCCTTGTAGGCACCGGGTGGCGGCAGTCTCTCGGGATAGTCCTCCTAACCTCGTGG
TACAACCGCTGGGGAGGATCGGACACGAACCCTCTGACGCGCAACGCCATCACCGGATTCGGCTACATGTGCTTC
ACGTCGGGGGCGCTCGAGGTGGCGTACGGAAAGGCGCTGCCTCTGGATGGTAGTAATCGACAGCTGATGGTGTGG
CTGTGCGTCCTGGGCGCCATCGTGACGACGACGATGCACGTGCAAGACATGGAGGATCAGGAGGGAGACGGCCAG
CGAGGAAGAAGAACGGCGCCTCTGGTGCTGGGCGATGGGCCATGTCGGTGGACGATTGCGCTGCCAATGGTCGGC
TGGGCCGTTGCCTGCCCGTCCATCTGGAGGCCGGCTCTGCCGATGGCGGGTGTGAGCACTGCTCTGGCGCTGACG
GTGGCGTTGAGGACGCTGATTTTGAGGCGGGAGAGTTCGGATCGGCGGACGTTTTGGGTGTGGAACGCGTGGATG
AGCTCGCTGTACATGATGCCTTTGTTTAGCCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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