© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|00913 |
| Gene name | |
| Location | scaffold_01:3476204..3477824 |
| Strand | - |
| Gene length (bp) | 1620 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1518 |
| Protein length (aa) | 506 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-23 | 2 | 396 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.4E-07 | 27 | 185 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 46 | 22 |
| 2 | 53 | 72 | 19 |
| 3 | 82 | 104 | 22 |
| 4 | 111 | 133 | 22 |
| 5 | 148 | 170 | 22 |
| 6 | 191 | 210 | 19 |
| 7 | 215 | 237 | 22 |
| 8 | 250 | 272 | 22 |
| 9 | 287 | 309 | 22 |
| 10 | 316 | 338 | 22 |
| 11 | 342 | 364 | 22 |
| 12 | 385 | 407 | 22 |
| 13 | 459 | 481 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 2.03 | 0.39 | 3.66 |
| Alive | In ants, during behavior modification | 4.17 | 1.16 | 7.18 |
| Dead | In ants, recently dead | 4.16 | 1.16 | 7.17 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.029648 | yes |
| Alive | Dead | 0.997626 | no |
| Dead | Fungus | 0.030758 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|00913 MSGMAIIQDTIARSLDAPPSLSPWFTTSYLMALSASVPIVGRLAGAGAAMPRILLLPAAAIFCAGALLAASASSA AVFIGGRVLAGVGGGAFLALAFVFVLALVPEPRRGIGLGVINAAITVGVSLGAVVYGGLLSAVGWRERQRPLFWM QAPVAFVAALAVFLCTPASIQSDQKHRESPSSLSRRLVRIDYLGAVLLCLTVVLFLYGLASTVQPLILGLSIVSL AAFIACEYLVAVDPVLPLTLLSSRGVLLSCISQLGLMAARWSLLFFAPIFILAVHGAPRSAAGSVLVPTNLGFAV GGIVVGSLHIRRTGSFWLSCLIALAFFSASILGLAIVASPRAALTPLIALVFINGFATGAALNYTMAHLLHLCHP DTEYVAASLLATFRGFGGSFGTSIGGGMFYRFLRRSLARGFLALDGGQHLSPAHSTLIPRLLGMPELVLHGGLSS EEQKVALNGYAGAIGFVWMAAAILMLMVMAAQAATGWTAPKPLRSADTVAHRRDE* |
| Coding | >Ophcf2|00913 ATGTCCGGCATGGCCATCATCCAAGACACCATCGCCCGCTCGTTAGACGCCCCCCCATCTCTCTCCCCCTGGTTC ACAACATCCTACCTGATGGCCCTCTCCGCTTCGGTCCCGATCGTCGGTCGCCTCGCCGGAGCCGGAGCCGCCATG CCACGGATCCTCCTGCTGCCGGCCGCGGCCATCTTCTGCGCCGGCGCACTTCTCGCGGCATCAGCCTCGTCAGCG GCCGTCTTCATCGGTGGACGCGTTCTCGCCGGTGTCGGAGGAGGTGCCTTCTTGGCCCTCGCCTTTGTCTTCGTG CTTGCGCTGGTGCCGGAGCCGCGGAGGGGCATCGGGCTGGGCGTCATAAACGCGGCCATCACTGTCGGTGTCTCG CTGGGCGCTGTCGTCTATGGAGGTTTACTTTCTGCCGTGGGATGGCGAGAGAGACAGAGGCCCCTATTCTGGATG CAGGCTCCCGTCGCCTTTGTCGCCGCTCTAGCCGTCTTTCTCTGCACGCCGGCGTCAATCCAGTCTGATCAGAAG CACCGAGAGTCGCCGTCGTCACTTTCACGGCGGCTGGTCCGGATCGACTATCTCGGAGCTGTCCTCCTTTGCCTC ACCGTAGTCCTCTTCCTCTACGGCCTCGCCAGCACCGTCCAGCCTCTCATCCTCGGCCTATCCATCGTGTCTCTC GCGGCCTTTATCGCGTGCGAGTACCTCGTCGCCGTCGATCCCGTCTTACCCCTGACCCTCCTCTCCTCACGCGGA GTCCTCCTCTCGTGTATCTCCCAGCTTGGTCTCATGGCTGCCCGCTGGAGTCTCCTCTTCTTCGCCCCCATCTTC ATCCTTGCCGTTCACGGGGCCCCCCGTTCCGCCGCGGGCTCCGTTCTGGTGCCGACCAACCTCGGCTTCGCTGTA GGCGGCATCGTCGTCGGCTCGCTGCACATCCGTCGTACCGGCTCCTTCTGGCTATCATGTCTCATCGCCTTGGCC TTCTTTTCCGCCTCTATTCTCGGTCTCGCCATCGTAGCATCCCCGCGAGCCGCTCTGACGCCCCTTATAGCTCTC GTCTTCATCAACGGCTTCGCGACGGGAGCTGCCCTCAACTACACCATGGCCCATCTGCTCCATCTCTGCCACCCC GACACCGAGTATGTCGCCGCCAGTCTCCTCGCCACGTTCCGCGGCTTCGGCGGCAGCTTCGGAACCTCCATCGGC GGCGGTATGTTCTATCGCTTCCTGCGACGCAGCCTCGCCCGCGGATTCTTGGCCCTCGACGGCGGCCAGCACCTC AGCCCGGCTCATAGTACGCTGATACCACGCCTCCTTGGCATGCCGGAGTTGGTTTTGCACGGCGGCCTTTCCAGC GAAGAGCAGAAAGTCGCTTTGAACGGCTATGCGGGTGCCATCGGCTTCGTCTGGATGGCCGCCGCCATTCTGATG CTGATGGTCATGGCGGCACAGGCAGCGACGGGATGGACAGCGCCTAAGCCATTAAGATCAGCAGATACGGTAGCC CACAGACGAGATGAATGA |
| Transcript | >Ophcf2|00913 ATGTCCGGCATGGCCATCATCCAAGACACCATCGCCCGCTCGTTAGACGCCCCCCCATCTCTCTCCCCCTGGTTC ACAACATCCTACCTGATGGCCCTCTCCGCTTCGGTCCCGATCGTCGGTCGCCTCGCCGGAGCCGGAGCCGCCATG CCACGGATCCTCCTGCTGCCGGCCGCGGCCATCTTCTGCGCCGGCGCACTTCTCGCGGCATCAGCCTCGTCAGCG GCCGTCTTCATCGGTGGACGCGTTCTCGCCGGTGTCGGAGGAGGTGCCTTCTTGGCCCTCGCCTTTGTCTTCGTG CTTGCGCTGGTGCCGGAGCCGCGGAGGGGCATCGGGCTGGGCGTCATAAACGCGGCCATCACTGTCGGTGTCTCG CTGGGCGCTGTCGTCTATGGAGGTTTACTTTCTGCCGTGGGATGGCGAGAGAGACAGAGGCCCCTATTCTGGATG CAGGCTCCCGTCGCCTTTGTCGCCGCTCTAGCCGTCTTTCTCTGCACGCCGGCGTCAATCCAGTCTGATCAGAAG CACCGAGAGTCGCCGTCGTCACTTTCACGGCGGCTGGTCCGGATCGACTATCTCGGAGCTGTCCTCCTTTGCCTC ACCGTAGTCCTCTTCCTCTACGGCCTCGCCAGCACCGTCCAGCCTCTCATCCTCGGCCTATCCATCGTGTCTCTC GCGGCCTTTATCGCGTGCGAGTACCTCGTCGCCGTCGATCCCGTCTTACCCCTGACCCTCCTCTCCTCACGCGGA GTCCTCCTCTCGTGTATCTCCCAGCTTGGTCTCATGGCTGCCCGCTGGAGTCTCCTCTTCTTCGCCCCCATCTTC ATCCTTGCCGTTCACGGGGCCCCCCGTTCCGCCGCGGGCTCCGTTCTGGTGCCGACCAACCTCGGCTTCGCTGTA GGCGGCATCGTCGTCGGCTCGCTGCACATCCGTCGTACCGGCTCCTTCTGGCTATCATGTCTCATCGCCTTGGCC TTCTTTTCCGCCTCTATTCTCGGTCTCGCCATCGTAGCATCCCCGCGAGCCGCTCTGACGCCCCTTATAGCTCTC GTCTTCATCAACGGCTTCGCGACGGGAGCTGCCCTCAACTACACCATGGCCCATCTGCTCCATCTCTGCCACCCC GACACCGAGTATGTCGCCGCCAGTCTCCTCGCCACGTTCCGCGGCTTCGGCGGCAGCTTCGGAACCTCCATCGGC GGCGGTATGTTCTATCGCTTCCTGCGACGCAGCCTCGCCCGCGGATTCTTGGCCCTCGACGGCGGCCAGCACCTC AGCCCGGCTCATAGTACGCTGATACCACGCCTCCTTGGCATGCCGGAGTTGGTTTTGCACGGCGGCCTTTCCAGC GAAGAGCAGAAAGTCGCTTTGAACGGCTATGCGGGTGCCATCGGCTTCGTCTGGATGGCCGCCGCCATTCTGATG CTGATGGTCATGGCGGCACAGGCAGCGACGGGATGGACAGCGCCTAAGCCATTAAGATCAGCAGATACGGTAGCC CACAGACGAGATGAATGA |
| Gene | >Ophcf2|00913 ATGTCCGGCATGGCCATCATCCAAGACACCATCGCCCGCTCGTTAGACGCCCCCCCATCTCTCTCCCCCTGGTTC ACAACATCCTACCTGATGGCCCTCTCCGCTTCGGTCCCGATCGTCGGTCGCCTCGCCGGAGCCGGAGCCGCCATG CCACGGATCCTCCTGCTGCCGGCCGCGGCCATCTTCTGCGCCGGCGCACTTCTCGCGGCATCAGCCTCGTCAGCG GCCGTCTTCATCGGTGGACGCGTTCTCGCCGGTGTCGGAGGAGGTGCCTTCTTGGCCCTCGCCTTTGTCTTCGTG CTTGCGCTGGTGCCGGAGCCGCGGAGGGGCATCGGGCTGGGCGTCATAAACGCGGCCATCACTGTCGGTGTCTCG CTGGGCGCTGTCGTCTATGGAGGTTTACTTTCTGCCGTGGGATGGGTGAGTCAGGAGCCATTGTGTCAAGTATAC GAGTACTCTGTCTTTGATCTTACCAGCGAGAGAGACAGAGGCCCCTATTCTGGATGCAGGCTCCCGTCGCCTTTG TCGCCGCTCTAGCCGTCTTTCTCTGCACGCCGGCGTCAATCCAGTCTGATCAGAAGCACCGAGAGTCGCCGTCGT CACTTTCACGGCGGCTGGTCCGGATCGACTATCTCGGAGCTGTCCTCCTTGTAAGTCTCGTCTCGTCTTCTCTGC TGTCCCGGACTCACCATCCAGTGCCTCACCGTAGTCCTCTTCCTCTACGGCCTCGCCAGCACCGTCCAGCCTCTC ATCCTCGGCCTATCCATCGTGTCTCTCGCGGCCTTTATCGCGTGCGAGTACCTCGTCGCCGTCGATCCCGTCTTA CCCCTGACCCTCCTCTCCTCACGCGGAGTCCTCCTCTCGTGTATCTCCCAGCTTGGTCTCATGGCTGCCCGCTGG AGTCTCCTCTTCTTCGCCCCCATCTTCATCCTTGCCGTTCACGGGGCCCCCCGTTCCGCCGCGGGCTCCGTTCTG GTGCCGACCAACCTCGGCTTCGCTGTAGGCGGCATCGTCGTCGGCTCGCTGCACATCCGTCGTACCGGCTCCTTC TGGCTATCATGTCTCATCGCCTTGGCCTTCTTTTCCGCCTCTATTCTCGGTCTCGCCATCGTAGCATCCCCGCGA GCCGCTCTGACGCCCCTTATAGCTCTCGTCTTCATCAACGGCTTCGCGACGGGAGCTGCCCTCAACTACACCATG GCCCATCTGCTCCATCTCTGCCACCCCGACACCGAGTATGTCGCCGCCAGTCTCCTCGCCACGTTCCGCGGCTTC GGCGGCAGCTTCGGAACCTCCATCGGCGGCGGTATGTTCTATCGCTTCCTGCGACGCAGCCTCGCCCGCGGATTC TTGGCCCTCGACGGCGGCCAGCACCTCAGCCCGGCTCATAGTACGCTGATACCACGCCTCCTTGGCATGCCGGAG TTGGTTTTGCACGGCGGCCTTTCCAGCGAAGAGCAGAAAGTCGCTTTGAACGGCTATGCGGGTGCCATCGGCTTC GTCTGGATGGCCGCCGCCATTCTGATGCTGATGGTCATGGCGGCACAGGCAGCGACGGGATGGACAGCGCCTAAG CCATTAAGATCAGCAGATACGGTAGCCCACAGACGAGATGAATGA |