Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00900
Gene name
Locationscaffold_01:3447208..3448161
Strand+
Gene length (bp)953
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 9.7E-06 23 87

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 182 204 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00900
MGRLAPLVVVAALTISNAAAQNPGTPPCIPECANRVRADFAKFTCQNANDAACLCTKDNFSFGVRDCGAHCGAND
DNVRQFLLGSFCAGGVFPQSASTQAQATPTSPLASTQPLSTSAIPSTTQQTTSSFTNASSSIVTTSSSATSASET
SSDVEAAPPSSTSTEAEVSTAPAGSSSQGTVIGIGIGVGAAVIALAGVVICFLLRGRKQKPRHSIEISKPLPGSG
RAYAGRERNSFEKQGNDIEMTSHRYEDMVPRQQPRTMV*
Coding >Ophcf2|00900
ATGGGCCGTCTCGCGCCGCTTGTCGTCGTCGCCGCTTTAACCATCTCCAACGCCGCTGCTCAGAACCCTGGGACG
CCACCATGCATCCCAGAATGCGCCAACCGAGTGAGGGCCGACTTCGCCAAGTTCACATGTCAGAACGCGAATGAT
GCCGCCTGTCTTTGCACCAAGGACAACTTTTCCTTCGGAGTTCGCGACTGTGGCGCCCACTGTGGCGCCAACGAT
GACAACGTCCGCCAGTTTCTGCTCGGCTCCTTTTGTGCAGGCGGCGTGTTTCCGCAGTCCGCCTCTACTCAGGCA
CAGGCCACGCCCACTTCTCCCCTGGCGTCGACGCAACCGTTGTCCACCAGTGCCATACCGTCCACGACGCAGCAG
ACTACATCTTCGTTCACAAATGCGTCGTCCTCCATCGTCACGACCTCGAGTTCTGCGACTTCTGCCTCGGAAACG
TCCTCAGATGTGGAAGCTGCCCCTCCGAGTTCCACGTCTACCGAAGCAGAAGTGAGCACTGCGCCAGCTGGCAGC
TCATCTCAGGGGACCGTCATCGGCATCGGTATTGGCGTGGGAGCTGCTGTCATTGCCCTCGCCGGCGTCGTCATC
TGCTTCTTGCTTCGCGGTCGCAAACAGAAACCCCGTCACTCGATTGAGATCTCCAAGCCGCTCCCTGGGTCGGGT
AGAGCTTATGCGGGCCGCGAACGCAACTCGTTCGAGAAGCAGGGCAACGATATCGAGATGACGTCGCACCGTTAT
GAAGACATGGTGCCCCGCCAGCAGCCGAGGACCATGGTTTAA
Transcript >Ophcf2|00900
ATGGGCCGTCTCGCGCCGCTTGTCGTCGTCGCCGCTTTAACCATCTCCAACGCCGCTGCTCAGAACCCTGGGACG
CCACCATGCATCCCAGAATGCGCCAACCGAGTGAGGGCCGACTTCGCCAAGTTCACATGTCAGAACGCGAATGAT
GCCGCCTGTCTTTGCACCAAGGACAACTTTTCCTTCGGAGTTCGCGACTGTGGCGCCCACTGTGGCGCCAACGAT
GACAACGTCCGCCAGTTTCTGCTCGGCTCCTTTTGTGCAGGCGGCGTGTTTCCGCAGTCCGCCTCTACTCAGGCA
CAGGCCACGCCCACTTCTCCCCTGGCGTCGACGCAACCGTTGTCCACCAGTGCCATACCGTCCACGACGCAGCAG
ACTACATCTTCGTTCACAAATGCGTCGTCCTCCATCGTCACGACCTCGAGTTCTGCGACTTCTGCCTCGGAAACG
TCCTCAGATGTGGAAGCTGCCCCTCCGAGTTCCACGTCTACCGAAGCAGAAGTGAGCACTGCGCCAGCTGGCAGC
TCATCTCAGGGGACCGTCATCGGCATCGGTATTGGCGTGGGAGCTGCTGTCATTGCCCTCGCCGGCGTCGTCATC
TGCTTCTTGCTTCGCGGTCGCAAACAGAAACCCCGTCACTCGATTGAGATCTCCAAGCCGCTCCCTGGGTCGGGT
AGAGCTTATGCGGGCCGCGAACGCAACTCGTTCGAGAAGCAGGGCAACGATATCGAGATGACGTCGCACCGTTAT
GAAGACATGGTGCCCCGCCAGCAGCCGAGGACCATGGTTTAA
Gene >Ophcf2|00900
ATGGGCCGTCTCGCGCCGCTTGTCGTCGTCGCCGCTTTAACCATCTCCAACGCCGCTGCTCAGAACCCTGGGACG
CCACCATGCATCGTGAGAAGCGTCGCTTCCCGCACCCAAGAACGTTCATCGCTGACCTCATCAACAGCCAGAATG
CGCCAACCGAGTGAGGGCCGACTTCGCCAAGTTCACATGTCAGAACGCGAATGATGCCGCCTGTCTTTGCACCAA
GGACAACTTTTCCTTCGGAGTTCGCGACTGTGGCGCCCACTGTGGCGCCAACGATGACAACGTCCGCCAGTTTCT
GCTCGGCTCCTTTTGTGCAGGTAAAGAAGATGGCGTCGCTTTCTACCCTCAGTCCCCGACTGACACCCGATATAG
GCGGCGTGTTTCCGCAGTCCGCCTCTACTCAGGCACAGGCCACGCCCACTTCTCCCCTGGCGTCGACGCAACCGT
TGTCCACCAGTGCCATACCGTCCACGACGCAGCAGACTACATCTTCGTTCACAAATGCGTCGTCCTCCATCGTCA
CGACCTCGAGTGTGAGTCGGAAAGCTGGTCATGAGTCCTGATTCGGCTAACAGACATGCCAGTCTGCGACTTCTG
CCTCGGAAACGTCCTCAGATGTGGAAGCTGCCCCTCCGAGTTCCACGTCTACCGAAGCAGAAGTGAGCACTGCGC
CAGCTGGCAGCTCATCTCAGGGGACCGTCATCGGCATCGGTATTGGCGTGGGAGCTGCTGTCATTGCCCTCGCCG
GCGTCGTCATCTGCTTCTTGCTTCGCGGTCGCAAACAGAAACCCCGTCACTCGATTGAGATCTCCAAGCCGCTCC
CTGGGTCGGGTAGAGCTTATGCGGGCCGCGAACGCAACTCGTTCGAGAAGCAGGGCAACGATATCGAGATGACGT
CGCACCGTTATGAAGACATGGTGCCCCGCCAGCAGCCGAGGACCATGGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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