© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|00878 |
| Gene name | |
| Location | scaffold_01:3364981..3366584 |
| Strand | - |
| Gene length (bp) | 1603 |
| Transcript length (bp) | 1428 |
| Coding sequence length (bp) | 1428 |
| Protein length (aa) | 476 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00891 | Methyltransf_2 | O-methyltransferase domain | 5.1E-22 | 229 | 439 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008171 | O-methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0008168 | methyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 11.32 | 4.73 | 17.91 |
| Alive | In ants, during behavior modification | 240.32 | 99.19 | 381.44 |
| Dead | In ants, recently dead | 286.37 | 128.99 | 443.75 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.451500 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|00878 MAKFKMLSWLQPSATTDGTKLKRLSLSNLSSPRRRKREELPVQDKTLPRQSRLTELVTKIAVETAKLEDYVRDEG FGVDTPDLPPRLQMSRQEVIWAAKELESLVKGPRESLQWAVWSYIDTLSLQIIYSYGIAQLVPLDTSITLSQLER KTSLDATNLARVLRHAMTKKIFREDSPGLISHTPASRLLVQDDLLKDWVGFNAEECFPAAAHVLEALRTHPEATS MTESGFNYAFGTVGMEPMFATLARDPDRARRMGRAMASFSSTKGYEVSYFVDGYDLADVDDRAGTFVDVGGSHGF VCVELARRWPRMSFIVQDLASTVESAPKPICDDETIASRIRLQKHDFFEEQPVKGADVYFYRWIFHNYPTPSAIN LLKKLTPSLKPGSRILINDHCLRAPGCEPPWDERLIRGMDMQMLAVLNAQERDEGQFRALFEAADRRFVFVGVRR FAGCLMAVVEAVWEPWAVEEMGVAG* |
| Coding | >Ophcf2|00878 ATGGCCAAGTTCAAGATGCTTTCGTGGCTCCAGCCATCAGCAACAACCGACGGTACCAAGCTCAAGCGCCTCTCC CTCTCGAACCTATCATCCCCTCGACGACGCAAGCGCGAGGAACTCCCCGTACAAGACAAGACCTTGCCTCGGCAG TCGCGTCTGACGGAGTTGGTGACCAAGATTGCGGTCGAGACGGCCAAGCTTGAGGACTACGTGCGGGATGAGGGC TTCGGCGTCGACACACCGGATTTGCCGCCGCGGCTGCAGATGAGTCGGCAGGAGGTCATCTGGGCGGCGAAGGAA CTGGAGAGCTTGGTCAAGGGGCCGAGGGAGAGTCTGCAGTGGGCGGTTTGGAGTTATATCGACACTCTGAGCCTT CAGATCATCTACAGCTACGGCATCGCCCAGCTCGTCCCGCTCGACACTTCCATCACCCTCTCACAACTCGAGCGC AAAACAAGCCTCGACGCGACCAACCTCGCCCGCGTCCTTCGCCACGCAATGACAAAGAAAATCTTCCGCGAAGAC TCACCAGGTCTCATCAGCCACACGCCCGCCTCCCGCCTCCTCGTGCAAGATGACCTCCTGAAAGACTGGGTCGGC TTCAACGCGGAAGAGTGCTTCCCCGCCGCCGCGCACGTACTAGAGGCGCTGAGGACGCACCCGGAAGCCACGTCG ATGACGGAGTCGGGCTTCAACTACGCCTTTGGCACCGTGGGGATGGAACCCATGTTCGCCACGCTGGCGAGGGAT CCTGATCGGGCGAGGCGAATGGGTCGGGCCATGGCGAGTTTCTCTTCGACCAAGGGCTACGAGGTGAGCTATTTC GTCGATGGGTATGATCTCGCCGACGTTGATGATCGGGCTGGTACCTTTGTCGATGTCGGTGGGAGTCATGGCTTC GTCTGCGTTGAGCTGGCCAGGAGATGGCCAAGGATGAGCTTCATCGTTCAGGATCTGGCTTCTACCGTGGAGAGC GCGCCGAAACCGATATGCGACGATGAGACTATTGCGTCTCGTATCCGGTTGCAGAAGCATGATTTCTTTGAAGAG CAGCCAGTCAAGGGCGCAGATGTATACTTCTACCGCTGGATCTTCCACAACTATCCAACCCCCTCAGCAATCAAC CTCCTGAAAAAGCTAACCCCCTCCCTAAAACCCGGCTCCCGAATCCTAATAAACGACCACTGCCTCCGTGCCCCC GGATGCGAACCCCCCTGGGACGAGCGCCTCATCCGGGGCATGGACATGCAGATGCTGGCCGTTTTAAACGCCCAG GAACGAGACGAGGGGCAATTCCGCGCTCTCTTCGAGGCCGCCGATCGCCGCTTCGTCTTCGTGGGTGTCAGGAGG TTTGCTGGCTGTCTGATGGCGGTCGTGGAGGCGGTCTGGGAGCCTTGGGCTGTGGAGGAGATGGGAGTTGCTGGT TGA |
| Transcript | >Ophcf2|00878 ATGGCCAAGTTCAAGATGCTTTCGTGGCTCCAGCCATCAGCAACAACCGACGGTACCAAGCTCAAGCGCCTCTCC CTCTCGAACCTATCATCCCCTCGACGACGCAAGCGCGAGGAACTCCCCGTACAAGACAAGACCTTGCCTCGGCAG TCGCGTCTGACGGAGTTGGTGACCAAGATTGCGGTCGAGACGGCCAAGCTTGAGGACTACGTGCGGGATGAGGGC TTCGGCGTCGACACACCGGATTTGCCGCCGCGGCTGCAGATGAGTCGGCAGGAGGTCATCTGGGCGGCGAAGGAA CTGGAGAGCTTGGTCAAGGGGCCGAGGGAGAGTCTGCAGTGGGCGGTTTGGAGTTATATCGACACTCTGAGCCTT CAGATCATCTACAGCTACGGCATCGCCCAGCTCGTCCCGCTCGACACTTCCATCACCCTCTCACAACTCGAGCGC AAAACAAGCCTCGACGCGACCAACCTCGCCCGCGTCCTTCGCCACGCAATGACAAAGAAAATCTTCCGCGAAGAC TCACCAGGTCTCATCAGCCACACGCCCGCCTCCCGCCTCCTCGTGCAAGATGACCTCCTGAAAGACTGGGTCGGC TTCAACGCGGAAGAGTGCTTCCCCGCCGCCGCGCACGTACTAGAGGCGCTGAGGACGCACCCGGAAGCCACGTCG ATGACGGAGTCGGGCTTCAACTACGCCTTTGGCACCGTGGGGATGGAACCCATGTTCGCCACGCTGGCGAGGGAT CCTGATCGGGCGAGGCGAATGGGTCGGGCCATGGCGAGTTTCTCTTCGACCAAGGGCTACGAGGTGAGCTATTTC GTCGATGGGTATGATCTCGCCGACGTTGATGATCGGGCTGGTACCTTTGTCGATGTCGGTGGGAGTCATGGCTTC GTCTGCGTTGAGCTGGCCAGGAGATGGCCAAGGATGAGCTTCATCGTTCAGGATCTGGCTTCTACCGTGGAGAGC GCGCCGAAACCGATATGCGACGATGAGACTATTGCGTCTCGTATCCGGTTGCAGAAGCATGATTTCTTTGAAGAG CAGCCAGTCAAGGGCGCAGATGTATACTTCTACCGCTGGATCTTCCACAACTATCCAACCCCCTCAGCAATCAAC CTCCTGAAAAAGCTAACCCCCTCCCTAAAACCCGGCTCCCGAATCCTAATAAACGACCACTGCCTCCGTGCCCCC GGATGCGAACCCCCCTGGGACGAGCGCCTCATCCGGGGCATGGACATGCAGATGCTGGCCGTTTTAAACGCCCAG GAACGAGACGAGGGGCAATTCCGCGCTCTCTTCGAGGCCGCCGATCGCCGCTTCGTCTTCGTGGGTGTCAGGAGG TTTGCTGGCTGTCTGATGGCGGTCGTGGAGGCGGTCTGGGAGCCTTGGGCTGTGGAGGAGATGGGAGTTGCTGGT TGA |
| Gene | >Ophcf2|00878 ATGGCCAAGTTCAAGATGCTTTCGTGGCTCCAGCCATCAGCAACAACCGACGGTACCAAGCTCAAGCGCCTCTCC CTCTCGAACCTATCATCCCCTCGACGACGCAAGCGCGAGGAACTCCCCGTACAAGACAAGACCTTGCCTCGGCAG TCGCGTCTGACGGAGTTGGTGACCAAGATTGCGGTCGAGACGGCCAAGCTTGAGGACTACGTGCGGGATGAGGGC TTCGGCGTCGACACACCGGATTTGCCGCCGCGGCTGCAGATGAGTCGGCAGGAGGTCATCTGGGCGGCGAAGGAA CTGGAGAGCTTGGTCAAGGGGCCGAGGGAGAGTCTGCAGTGGGCGGTTTGGAGTGTAAGTTTCGGGGATTGTATT GGTTGAGTCGGGTTGCTGAGGTGTTTGGCGGTAGTATATCGACACTCTGAGCCTTCAGATCATCTACAGCTACGG CATCGGTACGTTGCTCTACATGTCCCCCTATACTGTCTCATCTACTGACGAAGCCAAAAGCCCAGCTCGTCCCGC TCGACACTTCCATCACCCTCTCACAACTCGAGCGCAAAACAAGCCTCGACGCGACCAACCTCGCCCGCGTCCTTC GCCACGCAATGACAAAGAAAATCTTCCGCGAAGACTCACCAGGTCTCATCAGCCACACGCCCGCCTCCCGCCTCC TCGTGCAAGATGACCTCCTGAAAGACTGGGTCGGCTTCAACGCGGAAGAGTGCTTCCCCGCCGCCGCGCACGTAC TAGAGGCGCTGAGGACGCACCCGGAAGCCACGTCGATGACGGAGTCGGGCTTCAACTACGCCTTTGGCACCGTGG GGATGGAACCCATGTTCGCCACGCTGGCGAGGGATCCTGATCGGGCGAGGCGAATGGGTCGGGCCATGGCGAGTT TCTCTTCGACCAAGGGCTACGAGGTGAGCTATTTCGTCGATGGGTATGATCTCGCCGACGTTGATGATCGGGCTG GTACCTTTGTCGATGTCGGTGGGAGTCATGGCTTCGTCTGCGTTGAGCTGGCCAGGAGATGGCCAAGGATGAGCT TCATCGTTCAGGATCTGGCTTCTACCGTGGAGAGCGCGCCGAAACCGATATGCGACGATGAGACTATTGCGTCTC GTATCCGGTTGCAGAAGCATGATTTCTTTGAAGAGCAGCCAGTCAAGGGCGCAGATGGTAAACAACGCTCCTCCC CCTTGGTCACCACAACCATACATAGCTAGAGATTAAGAGAGAAGCAGTATACTTCTACCGCTGGATCTTCCACAA CTATCCAACCCCCTCAGCAATCAACCTCCTGAAAAAGCTAACCCCCTCCCTAAAACCCGGCTCCCGAATCCTAAT AAACGACCACTGCCTCCGTGCCCCCGGATGCGAACCCCCCTGGGACGAGCGCCTCATCCGGGGCATGGACATGCA GATGCTGGCCGTTTTAAACGCCCAGGAACGAGACGAGGGGCAATTCCGCGCTCTCTTCGAGGCCGCCGATCGCCG CTTCGTCTTCGTGGGTGTCAGGAGGTTTGCTGGCTGTCTGATGGCGGTCGTGGAGGCGGTCTGGGAGCCTTGGGC TGTGGAGGAGATGGGAGTTGCTGGTTGA |