Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00841
Gene name
Locationscaffold_01:3248551..3250536
Strand+
Gene length (bp)1985
Transcript length (bp)1758
Coding sequence length (bp)1758
Protein length (aa) 586

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 8.8E-23 135 427
PF04083 Abhydro_lipase Partial alpha/beta-hydrolase lipase region 1.7E-21 81 148

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 71.24 40.86 101.62
Alive In ants, during behavior modification 53.21 30.04 76.37
Dead In ants, recently dead 63.18 36.32 90.05

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.124165 no
Alive Dead 0.325247 no
Dead Fungus 0.569274 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00841
MPLPFLGRLHPAEYLAIVGSFVLVGLEAVIRACTLSLPAFLVSLFYRASRLIFNRYSSPAQKRAENKQKSVSTSV
RDAADFVELCRIWGYEAEEHIVQTKDGYLLGIHRLQWKKDEERHNVNCGPESVRKRIAYLHHGLLMNSEVWVCLT
DEQRCLPFQLLERGFDVWLGNNRGNKYSKKSIHMSPTSIAFWDFSMDEFAFHDIPDTIAYILETTQQESLSYIGF
SQGTAQAFATLAIHPRLNSQVNVFIALAPAMAPAGLSNGMVDALVKASPSVLYLMFGRRSILSSATMWEMLVYPP
LFCRLIDMGLSFLFGWRTRNLSTSQKLAAYPHLYSFTSTKSVVHWFQIIRNRCFQMYDDDRQKLVSVSSSHKYSK
VAKYPTRNIRTPVVLLYGGSDSLVDIRSMLKELPPQTVATEIPHYEHLDFLWARDVDSQLFQHVFDALDSFTDAG
HTREEYDRYHLVRSESLIGSAFSQHHHRRAGSESESSTMAGSTDGGGGRSSPRILQHRAREDQLFYDDDDNFDNP
HARHPRLHHSEPAPAADKLRGVGRRRNTTALDSIVEAKGPVAAVEGEDSAGAAKRNGKDA*
Coding >Ophcf2|00841
ATGCCTCTCCCCTTTCTCGGGAGGTTACACCCCGCCGAGTATCTCGCCATCGTCGGATCCTTCGTCCTCGTCGGA
CTCGAGGCCGTGATCCGCGCCTGCACGCTCTCTCTGCCCGCATTCCTCGTCTCTCTCTTCTACCGAGCCTCGCGC
CTCATCTTCAACCGCTACTCGTCTCCGGCCCAGAAGCGCGCAGAGAACAAACAGAAATCCGTGTCGACCTCGGTC
CGCGATGCGGCAGACTTTGTCGAGCTGTGCCGCATTTGGGGATACGAGGCGGAAGAGCACATCGTTCAGACGAAA
GACGGCTACCTCCTCGGCATTCATCGCCTGCAGTGGAAAAAGGATGAAGAGAGGCACAATGTCAACTGCGGGCCC
GAGAGCGTGCGGAAACGTATCGCCTACCTCCATCACGGCCTGCTCATGAATTCAGAGGTTTGGGTCTGCCTCACC
GACGAGCAGAGATGTCTCCCCTTTCAGCTCCTAGAGCGCGGCTTCGACGTCTGGCTTGGAAACAACCGCGGAAAC
AAATACTCCAAGAAGTCGATCCACATGTCGCCGACCTCCATCGCCTTCTGGGACTTCTCCATGGACGAATTCGCC
TTCCACGACATCCCCGACACCATCGCCTACATCCTCGAAACGACGCAGCAGGAGAGCCTGTCCTACATCGGCTTC
TCCCAGGGAACAGCACAGGCCTTCGCCACGCTGGCCATCCACCCGCGACTCAACAGCCAGGTCAACGTCTTCATC
GCCCTCGCACCCGCCATGGCACCAGCCGGCCTCTCCAACGGCATGGTCGACGCCCTGGTCAAGGCCTCGCCCTCG
GTTCTCTACCTCATGTTCGGCAGGCGTTCTATCCTCAGCTCCGCCACCATGTGGGAGATGCTCGTCTACCCGCCT
CTCTTCTGCCGTCTCATCGACATGGGCCTCTCCTTTCTCTTCGGCTGGCGCACGCGTAACCTATCGACGAGTCAG
AAGCTGGCGGCTTACCCTCATCTCTACTCCTTCACCAGCACCAAGAGCGTCGTCCACTGGTTTCAAATCATCCGC
AACCGCTGCTTCCAGATGTACGACGACGACCGACAAAAGCTCGTCAGCGTCAGCTCATCCCACAAGTACTCCAAG
GTAGCAAAGTATCCCACGCGCAACATCCGCACCCCCGTCGTCCTCCTCTACGGCGGAAGCGACTCCCTCGTCGAC
ATCCGCTCCATGCTCAAGGAACTCCCCCCCCAGACCGTCGCCACCGAGATCCCCCACTACGAGCATCTCGACTTC
CTCTGGGCCCGCGACGTGGACTCCCAGCTGTTCCAGCACGTCTTCGACGCCCTCGACAGCTTCACCGACGCCGGT
CATACCAGAGAAGAGTACGATCGCTATCACCTAGTCCGAAGCGAGAGCCTCATCGGCTCCGCCTTTTCCCAACAC
CATCATCGCCGCGCCGGCAGCGAGAGCGAGTCCTCTACCATGGCCGGTAGCACCGACGGTGGCGGCGGCCGCTCC
TCTCCCCGTATACTTCAACATCGCGCTCGCGAGGATCAGCTCTTTTACGATGACGACGACAACTTCGATAACCCC
CATGCTCGTCATCCACGCCTTCACCACTCCGAGCCGGCGCCCGCGGCAGATAAGCTCAGGGGCGTCGGCCGTCGC
CGCAATACCACTGCCTTGGACAGCATCGTCGAGGCCAAGGGCCCGGTTGCCGCCGTCGAGGGCGAGGACAGCGCC
GGCGCCGCCAAGAGAAACGGCAAAGACGCCTGA
Transcript >Ophcf2|00841
ATGCCTCTCCCCTTTCTCGGGAGGTTACACCCCGCCGAGTATCTCGCCATCGTCGGATCCTTCGTCCTCGTCGGA
CTCGAGGCCGTGATCCGCGCCTGCACGCTCTCTCTGCCCGCATTCCTCGTCTCTCTCTTCTACCGAGCCTCGCGC
CTCATCTTCAACCGCTACTCGTCTCCGGCCCAGAAGCGCGCAGAGAACAAACAGAAATCCGTGTCGACCTCGGTC
CGCGATGCGGCAGACTTTGTCGAGCTGTGCCGCATTTGGGGATACGAGGCGGAAGAGCACATCGTTCAGACGAAA
GACGGCTACCTCCTCGGCATTCATCGCCTGCAGTGGAAAAAGGATGAAGAGAGGCACAATGTCAACTGCGGGCCC
GAGAGCGTGCGGAAACGTATCGCCTACCTCCATCACGGCCTGCTCATGAATTCAGAGGTTTGGGTCTGCCTCACC
GACGAGCAGAGATGTCTCCCCTTTCAGCTCCTAGAGCGCGGCTTCGACGTCTGGCTTGGAAACAACCGCGGAAAC
AAATACTCCAAGAAGTCGATCCACATGTCGCCGACCTCCATCGCCTTCTGGGACTTCTCCATGGACGAATTCGCC
TTCCACGACATCCCCGACACCATCGCCTACATCCTCGAAACGACGCAGCAGGAGAGCCTGTCCTACATCGGCTTC
TCCCAGGGAACAGCACAGGCCTTCGCCACGCTGGCCATCCACCCGCGACTCAACAGCCAGGTCAACGTCTTCATC
GCCCTCGCACCCGCCATGGCACCAGCCGGCCTCTCCAACGGCATGGTCGACGCCCTGGTCAAGGCCTCGCCCTCG
GTTCTCTACCTCATGTTCGGCAGGCGTTCTATCCTCAGCTCCGCCACCATGTGGGAGATGCTCGTCTACCCGCCT
CTCTTCTGCCGTCTCATCGACATGGGCCTCTCCTTTCTCTTCGGCTGGCGCACGCGTAACCTATCGACGAGTCAG
AAGCTGGCGGCTTACCCTCATCTCTACTCCTTCACCAGCACCAAGAGCGTCGTCCACTGGTTTCAAATCATCCGC
AACCGCTGCTTCCAGATGTACGACGACGACCGACAAAAGCTCGTCAGCGTCAGCTCATCCCACAAGTACTCCAAG
GTAGCAAAGTATCCCACGCGCAACATCCGCACCCCCGTCGTCCTCCTCTACGGCGGAAGCGACTCCCTCGTCGAC
ATCCGCTCCATGCTCAAGGAACTCCCCCCCCAGACCGTCGCCACCGAGATCCCCCACTACGAGCATCTCGACTTC
CTCTGGGCCCGCGACGTGGACTCCCAGCTGTTCCAGCACGTCTTCGACGCCCTCGACAGCTTCACCGACGCCGGT
CATACCAGAGAAGAGTACGATCGCTATCACCTAGTCCGAAGCGAGAGCCTCATCGGCTCCGCCTTTTCCCAACAC
CATCATCGCCGCGCCGGCAGCGAGAGCGAGTCCTCTACCATGGCCGGTAGCACCGACGGTGGCGGCGGCCGCTCC
TCTCCCCGTATACTTCAACATCGCGCTCGCGAGGATCAGCTCTTTTACGATGACGACGACAACTTCGATAACCCC
CATGCTCGTCATCCACGCCTTCACCACTCCGAGCCGGCGCCCGCGGCAGATAAGCTCAGGGGCGTCGGCCGTCGC
CGCAATACCACTGCCTTGGACAGCATCGTCGAGGCCAAGGGCCCGGTTGCCGCCGTCGAGGGCGAGGACAGCGCC
GGCGCCGCCAAGAGAAACGGCAAAGACGCCTGA
Gene >Ophcf2|00841
ATGCCTCTCCCCTTTCTCGGGAGGTTACACCCGTCTGTATCGCCCACGTCCAGTCCTCAAGTCCTCACTGACGCT
CAGACACAGCGCCGAGTATCTCGCCATCGTCGGATCCTTCGTCCTCGTCGGACTCGAGGCCGTGATCCGCGCCTG
CACGCTCTCTCTGCGTACGTCAAAGACCAATCAGTTCTTCCCGCACCATGGGCTCTGACTTGAGCCCAGCCGCAT
TCCTCGTCTCTCTCTTCTACCGAGCCTCGCGCCTCATCTTCAACCGCTACTCGTCTCCGGCCCAGAAGCGCGCAG
AGAACAAACAGAAATGTCGGTCCGCCGTCTCCTTATCGATAAACTATGGCTTCATCTGACTCTGCCTTACCTACT
AACAGCCGTGTCGACCTCGGTCCGCGATGCGGCAGACTTTGTCGAGCTGTGCCGCATTTGGGGATACGAGGCGGA
AGAGCACATCGTTCAGACGAAAGACGGCTACCTCCTCGGCATTCATCGCCTGCAGTGGAAAAAGGATGAAGAGAG
GCACAATGTCAACTGCGGGCCCGAGAGCGTGCGGAAACGTATCGCCTACCTCCATCACGGCCTGCTCATGAATTC
AGAGGTTTGGGTCTGCCTCACCGACGAGCAGAGATGTCTCCCCTTTCAGCTCCTAGAGCGCGGCTTCGACGTCTG
GGTATCATCCGCTGAAATATCTACCCCTTTCATCCCCTCGCTGACCCCAGCCGCAGCTTGGAAACAACCGCGGAA
ACAAATACTCCAAGAAGTCGATCCACATGTCGCCGACCTCCATCGCCTTCTGGGACTTCTCCATGGACGAATTCG
CCTTCCACGACATCCCCGACACCATCGCCTACATCCTCGAAACGACGCAGCAGGAGAGCCTGTCCTACATCGGCT
TCTCCCAGGGAACAGCACAGGCCTTCGCCACGCTGGCCATCCACCCGCGACTCAACAGCCAGGTCAACGTCTTCA
TCGCCCTCGCACCCGCCATGGCACCAGCCGGCCTCTCCAACGGCATGGTCGACGCCCTGGTCAAGGCCTCGCCCT
CGGTTCTCTACCTCATGTTCGGCAGGCGTTCTATCCTCAGCTCCGCCACCATGTGGGAGATGCTCGTCTACCCGC
CTCTCTTCTGCCGTCTCATCGACATGGGCCTCTCCTTTCTCTTCGGCTGGCGCACGCGTAACCTATCGACGAGTC
AGAAGCTGGCGGCTTACCCTCATCTCTACTCCTTCACCAGCACCAAGAGCGTCGTCCACTGGTTTCAAATCATCC
GCAACCGCTGCTTCCAGATGTACGACGACGACCGACAAAAGCTCGTCAGCGTCAGCTCATCCCACAAGTACTCCA
AGGTAGCAAAGTATCCCACGCGCAACATCCGCACCCCCGTCGTCCTCCTCTACGGCGGAAGCGACTCCCTCGTCG
ACATCCGCTCCATGCTCAAGGAACTCCCCCCCCAGACCGTCGCCACCGAGATCCCCCACTACGAGCATCTCGACT
TCCTCTGGGCCCGCGACGTGGACTCCCAGCTGTTCCAGCACGTCTTCGACGCCCTCGACAGCTTCACCGACGCCG
GTCATACCAGAGAAGAGTACGATCGCTATCACCTAGTCCGAAGCGAGAGCCTCATCGGCTCCGCCTTTTCCCAAC
ACCATCATCGCCGCGCCGGCAGCGAGAGCGAGTCCTCTACCATGGCCGGTAGCACCGACGGTGGCGGCGGCCGCT
CCTCTCCCCGTATACTTCAACATCGCGCTCGCGAGGATCAGCTCTTTTACGATGACGACGACAACTTCGATAACC
CCCATGCTCGTCATCCACGCCTTCACCACTCCGAGCCGGCGCCCGCGGCAGATAAGCTCAGGGGCGTCGGCCGTC
GCCGCAATACCACTGCCTTGGACAGCATCGTCGAGGCCAAGGGCCCGGTTGCCGCCGTCGAGGGCGAGGACAGCG
CCGGCGCCGCCAAGAGAAACGGCAAAGACGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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