Protein ID | Ophcf2|00836 |
Gene name | |
Location | scaffold_01:3238317..3240063 |
Strand | + |
Gene length (bp) | 1746 |
Transcript length (bp) | 1746 |
Coding sequence length (bp) | 1746 |
Protein length (aa) | 582 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00135 | COesterase | Carboxylesterase family | 2.1E-72 | 49 | 542 |
PF20434 | BD-FAE | BD-FAE | 6.9E-09 | 151 | 254 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1405 | 0.0762 | 0.8711 | 0.0403 | 0.1082 | 0.0421 | 0.3099 | 0.2119 | 0.1199 | 0.0217 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999691 |
Orthofinder run ID | 4 |
Orthogroup | 139 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00836 MRLALVSLCVAVGVCGLKLEQRAPTLQELAPQLEERTTDLEERSLKVRIPFRDGSLTGRSLLGIETFSGIPYADA PVGPLRLRPPQRLSAEIGHRRVLGPAPACPQMFLSHNKGEPLGGLLSEILKMPFLRPFGGQEDCLTVTVQRPVGT KAGDKLPVLFWIYGGGFQFGATNTYDAVNLLQTGVRHGQPFVFVAVNYRVNAFGFLGGAEVLRDGSANLGLLDQR MALEWVADNIDAFGGDAERVTIWGESAGAISVFNQMVLYGGNATYRGRSLFRGAIMNSGGLVPTAPVDSSKAQDV FNSVARHAGCEAAADVLVCLRGVSYDRFLDATISLHGILSYNALTLPYIPRPDGVVLPASPDVLLQTGRYHAVPT IVGNQEDEGTLFSLLMGPLHGTQQIVDRLARDFFFNTSKEVLTEFVDLYKPNIREGSPFRTGIFNELYWGYKRVS AILGDVVFILTRRLGLSMALNLKGHVAAWSYLASYGHGLPFLGTFHASDVLRLFYDVLPDHATASCRTYYLNFLY NLDPNVGVPGYRHWPQWAERQELMWFKTPHGNEILRDDFRSAASDWMGKHLGALLV* |
Coding | >Ophcf2|00836 ATGCGTCTGGCCTTGGTCTCTCTCTGCGTCGCCGTCGGTGTTTGCGGCCTCAAGCTGGAGCAACGAGCCCCGACG CTCCAGGAACTGGCTCCGCAGCTGGAAGAACGGACGACGGATCTGGAGGAGCGGTCTCTCAAGGTCCGGATCCCC TTCCGTGATGGGTCCCTCACCGGCCGGTCGCTTCTCGGCATCGAGACATTCAGCGGCATCCCTTACGCGGACGCT CCCGTCGGTCCGCTCCGGCTCCGGCCCCCGCAGCGGCTCTCGGCCGAGATCGGACACCGGAGGGTGCTCGGACCG GCGCCGGCGTGTCCTCAGATGTTCCTGTCGCACAACAAGGGGGAGCCCCTAGGCGGTCTACTATCCGAAATCCTC AAGATGCCGTTCCTTCGACCGTTTGGCGGCCAGGAGGACTGTCTGACGGTGACTGTGCAGAGACCGGTCGGGACC AAGGCGGGCGATAAGTTGCCCGTGCTGTTCTGGATCTACGGCGGCGGCTTTCAGTTCGGAGCGACCAACACGTAC GACGCTGTGAACCTGCTGCAGACGGGCGTCCGTCATGGCCAGCCGTTCGTCTTCGTGGCCGTCAACTATCGCGTC AACGCCTTTGGCTTCCTGGGGGGGGCCGAAGTGCTCCGTGACGGCAGCGCCAACCTGGGCCTGTTGGATCAGCGG ATGGCACTCGAGTGGGTGGCGGACAATATCGACGCGTTCGGAGGCGACGCCGAGCGGGTGACGATATGGGGAGAG TCGGCCGGGGCCATATCCGTCTTCAACCAGATGGTCCTGTACGGGGGAAACGCCACTTACAGGGGCCGGTCGTTG TTCAGGGGCGCCATCATGAACTCGGGCGGCCTCGTTCCGACGGCCCCCGTCGATTCTTCCAAGGCTCAGGACGTC TTCAACTCGGTGGCTCGACATGCCGGATGCGAAGCAGCAGCTGACGTCCTGGTCTGTCTCCGAGGCGTATCTTAC GACCGCTTCCTAGACGCCACCATCTCGCTGCACGGCATCCTCTCGTACAACGCCCTGACACTACCCTACATCCCA AGACCAGACGGCGTCGTCCTACCAGCCAGTCCGGACGTGCTCCTCCAGACGGGCCGCTATCACGCCGTGCCGACC ATCGTGGGCAACCAGGAGGACGAGGGTACCCTCTTCTCCCTGCTCATGGGTCCCCTGCACGGGACGCAGCAGATT GTCGACCGGCTGGCGCGCGACTTCTTCTTCAACACGTCCAAGGAGGTCTTGACCGAGTTTGTCGACCTTTACAAG CCCAACATCCGGGAGGGAAGCCCCTTTCGGACGGGCATCTTCAACGAGCTTTACTGGGGTTACAAGCGGGTATCG GCCATACTCGGAGACGTGGTCTTCATCCTTACCCGACGGCTGGGCCTCTCGATGGCGCTGAATCTCAAGGGCCAC GTCGCTGCCTGGTCATATCTTGCCTCGTACGGTCACGGCCTTCCCTTCCTGGGCACCTTTCACGCCTCTGACGTG CTGCGTCTCTTCTACGACGTGCTTCCCGATCACGCGACGGCCAGCTGCCGGACTTACTATCTCAACTTCCTCTAC AACCTGGATCCCAACGTCGGCGTCCCCGGCTATCGGCATTGGCCGCAGTGGGCGGAGCGGCAGGAGCTGATGTGG TTCAAGACGCCTCATGGGAACGAGATTCTGAGGGATGACTTTCGATCTGCCGCTTCGGACTGGATGGGGAAGCAC TTGGGGGCCTTGTTGGTGTAA |
Transcript | >Ophcf2|00836 ATGCGTCTGGCCTTGGTCTCTCTCTGCGTCGCCGTCGGTGTTTGCGGCCTCAAGCTGGAGCAACGAGCCCCGACG CTCCAGGAACTGGCTCCGCAGCTGGAAGAACGGACGACGGATCTGGAGGAGCGGTCTCTCAAGGTCCGGATCCCC TTCCGTGATGGGTCCCTCACCGGCCGGTCGCTTCTCGGCATCGAGACATTCAGCGGCATCCCTTACGCGGACGCT CCCGTCGGTCCGCTCCGGCTCCGGCCCCCGCAGCGGCTCTCGGCCGAGATCGGACACCGGAGGGTGCTCGGACCG GCGCCGGCGTGTCCTCAGATGTTCCTGTCGCACAACAAGGGGGAGCCCCTAGGCGGTCTACTATCCGAAATCCTC AAGATGCCGTTCCTTCGACCGTTTGGCGGCCAGGAGGACTGTCTGACGGTGACTGTGCAGAGACCGGTCGGGACC AAGGCGGGCGATAAGTTGCCCGTGCTGTTCTGGATCTACGGCGGCGGCTTTCAGTTCGGAGCGACCAACACGTAC GACGCTGTGAACCTGCTGCAGACGGGCGTCCGTCATGGCCAGCCGTTCGTCTTCGTGGCCGTCAACTATCGCGTC AACGCCTTTGGCTTCCTGGGGGGGGCCGAAGTGCTCCGTGACGGCAGCGCCAACCTGGGCCTGTTGGATCAGCGG ATGGCACTCGAGTGGGTGGCGGACAATATCGACGCGTTCGGAGGCGACGCCGAGCGGGTGACGATATGGGGAGAG TCGGCCGGGGCCATATCCGTCTTCAACCAGATGGTCCTGTACGGGGGAAACGCCACTTACAGGGGCCGGTCGTTG TTCAGGGGCGCCATCATGAACTCGGGCGGCCTCGTTCCGACGGCCCCCGTCGATTCTTCCAAGGCTCAGGACGTC TTCAACTCGGTGGCTCGACATGCCGGATGCGAAGCAGCAGCTGACGTCCTGGTCTGTCTCCGAGGCGTATCTTAC GACCGCTTCCTAGACGCCACCATCTCGCTGCACGGCATCCTCTCGTACAACGCCCTGACACTACCCTACATCCCA AGACCAGACGGCGTCGTCCTACCAGCCAGTCCGGACGTGCTCCTCCAGACGGGCCGCTATCACGCCGTGCCGACC ATCGTGGGCAACCAGGAGGACGAGGGTACCCTCTTCTCCCTGCTCATGGGTCCCCTGCACGGGACGCAGCAGATT GTCGACCGGCTGGCGCGCGACTTCTTCTTCAACACGTCCAAGGAGGTCTTGACCGAGTTTGTCGACCTTTACAAG CCCAACATCCGGGAGGGAAGCCCCTTTCGGACGGGCATCTTCAACGAGCTTTACTGGGGTTACAAGCGGGTATCG GCCATACTCGGAGACGTGGTCTTCATCCTTACCCGACGGCTGGGCCTCTCGATGGCGCTGAATCTCAAGGGCCAC GTCGCTGCCTGGTCATATCTTGCCTCGTACGGTCACGGCCTTCCCTTCCTGGGCACCTTTCACGCCTCTGACGTG CTGCGTCTCTTCTACGACGTGCTTCCCGATCACGCGACGGCCAGCTGCCGGACTTACTATCTCAACTTCCTCTAC AACCTGGATCCCAACGTCGGCGTCCCCGGCTATCGGCATTGGCCGCAGTGGGCGGAGCGGCAGGAGCTGATGTGG TTCAAGACGCCTCATGGGAACGAGATTCTGAGGGATGACTTTCGATCTGCCGCTTCGGACTGGATGGGGAAGCAC TTGGGGGCCTTGTTGGTGTAA |
Gene | >Ophcf2|00836 ATGCGTCTGGCCTTGGTCTCTCTCTGCGTCGCCGTCGGTGTTTGCGGCCTCAAGCTGGAGCAACGAGCCCCGACG CTCCAGGAACTGGCTCCGCAGCTGGAAGAACGGACGACGGATCTGGAGGAGCGGTCTCTCAAGGTCCGGATCCCC TTCCGTGATGGGTCCCTCACCGGCCGGTCGCTTCTCGGCATCGAGACATTCAGCGGCATCCCTTACGCGGACGCT CCCGTCGGTCCGCTCCGGCTCCGGCCCCCGCAGCGGCTCTCGGCCGAGATCGGACACCGGAGGGTGCTCGGACCG GCGCCGGCGTGTCCTCAGATGTTCCTGTCGCACAACAAGGGGGAGCCCCTAGGCGGTCTACTATCCGAAATCCTC AAGATGCCGTTCCTTCGACCGTTTGGCGGCCAGGAGGACTGTCTGACGGTGACTGTGCAGAGACCGGTCGGGACC AAGGCGGGCGATAAGTTGCCCGTGCTGTTCTGGATCTACGGCGGCGGCTTTCAGTTCGGAGCGACCAACACGTAC GACGCTGTGAACCTGCTGCAGACGGGCGTCCGTCATGGCCAGCCGTTCGTCTTCGTGGCCGTCAACTATCGCGTC AACGCCTTTGGCTTCCTGGGGGGGGCCGAAGTGCTCCGTGACGGCAGCGCCAACCTGGGCCTGTTGGATCAGCGG ATGGCACTCGAGTGGGTGGCGGACAATATCGACGCGTTCGGAGGCGACGCCGAGCGGGTGACGATATGGGGAGAG TCGGCCGGGGCCATATCCGTCTTCAACCAGATGGTCCTGTACGGGGGAAACGCCACTTACAGGGGCCGGTCGTTG TTCAGGGGCGCCATCATGAACTCGGGCGGCCTCGTTCCGACGGCCCCCGTCGATTCTTCCAAGGCTCAGGACGTC TTCAACTCGGTGGCTCGACATGCCGGATGCGAAGCAGCAGCTGACGTCCTGGTCTGTCTCCGAGGCGTATCTTAC GACCGCTTCCTAGACGCCACCATCTCGCTGCACGGCATCCTCTCGTACAACGCCCTGACACTACCCTACATCCCA AGACCAGACGGCGTCGTCCTACCAGCCAGTCCGGACGTGCTCCTCCAGACGGGCCGCTATCACGCCGTGCCGACC ATCGTGGGCAACCAGGAGGACGAGGGTACCCTCTTCTCCCTGCTCATGGGTCCCCTGCACGGGACGCAGCAGATT GTCGACCGGCTGGCGCGCGACTTCTTCTTCAACACGTCCAAGGAGGTCTTGACCGAGTTTGTCGACCTTTACAAG CCCAACATCCGGGAGGGAAGCCCCTTTCGGACGGGCATCTTCAACGAGCTTTACTGGGGTTACAAGCGGGTATCG GCCATACTCGGAGACGTGGTCTTCATCCTTACCCGACGGCTGGGCCTCTCGATGGCGCTGAATCTCAAGGGCCAC GTCGCTGCCTGGTCATATCTTGCCTCGTACGGTCACGGCCTTCCCTTCCTGGGCACCTTTCACGCCTCTGACGTG CTGCGTCTCTTCTACGACGTGCTTCCCGATCACGCGACGGCCAGCTGCCGGACTTACTATCTCAACTTCCTCTAC AACCTGGATCCCAACGTCGGCGTCCCCGGCTATCGGCATTGGCCGCAGTGGGCGGAGCGGCAGGAGCTGATGTGG TTCAAGACGCCTCATGGGAACGAGATTCTGAGGGATGACTTTCGATCTGCCGCTTCGGACTGGATGGGGAAGCAC TTGGGGGCCTTGTTGGTGTAA |