Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00823
Gene name
Locationscaffold_01:3202533..3203886
Strand+
Gene length (bp)1353
Transcript length (bp)1308
Coding sequence length (bp)1308
Protein length (aa) 436

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00487 FA_desaturase Fatty acid desaturase 4.0E-14 151 355

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 114 133 19
2 138 160 22
3 232 251 19
4 266 288 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00823
MDRLISLDDGLTIADRLVLESLVEDIKETEPVRDDGDSGVGIESCSNAAKIQDKTARDIDRLKAMNDTLSSQFQP
TVLLSVDDCSRLVPSALDRRVLQPCIRLARKTARHETDVVMITHLLLYLLTTVPSALILYQHFTFIHGIAHAAMQ
AYYIGTYTLMMHQHIHQRGILSKRLNLLDGLFPYVLDPLMGHTWNSYYYHHVKHHHVENNGPQDLSSTMAYQRDS
IRDFTRYLARFFFLVWLDLSLYFFRTKRPGLAVRAGGWEMLTYGFYLTMATVFSAKATLFVYLMPFLLLRLALMV
GNWGQHAFVDPEEPDSDYRSSITLVDVASNRYCFNDGYHTSHHLNPLRHWRQHPISFLEQKQTYAAEGALVFHNI
DFLMITLSLLRKDYDRLANCMVPMGEQLVLDHQGRVALLKRLTRRFTDEEIRDKHRLKGV*
Coding >Ophcf2|00823
ATGGACAGGCTGATATCCCTCGACGACGGCTTGACCATCGCCGACAGGCTCGTACTAGAGAGTCTCGTCGAGGAC
ATCAAGGAGACTGAACCGGTGCGAGACGATGGCGACTCCGGCGTCGGGATCGAGTCCTGCTCGAACGCGGCCAAG
ATACAAGACAAGACGGCGCGCGACATTGACAGGCTCAAGGCAATGAACGACACGCTGAGCTCACAGTTTCAGCCG
ACGGTGCTCCTATCCGTCGATGACTGCTCTCGTCTCGTGCCGTCAGCATTGGACAGACGTGTGCTGCAGCCGTGC
ATCAGGCTGGCGCGAAAGACGGCTCGACACGAGACGGACGTGGTCATGATCACTCATCTGCTTCTCTACCTGTTG
ACGACGGTCCCCAGCGCGCTGATCTTGTATCAGCACTTCACCTTCATCCACGGCATAGCACACGCGGCGATGCAA
GCTTATTACATAGGCACCTACACGCTCATGATGCACCAGCACATCCATCAACGCGGCATTCTTTCGAAGAGACTG
AACCTTCTGGACGGGCTGTTTCCGTATGTGCTCGATCCGCTGATGGGTCACACGTGGAATTCGTACTACTACCAC
CACGTCAAGCATCATCACGTCGAGAACAACGGGCCCCAAGACCTGTCGTCGACCATGGCCTACCAGCGGGACAGC
ATCCGTGATTTTACACGCTACCTCGCCCGCTTCTTCTTTCTCGTCTGGCTCGACCTGTCGCTGTACTTTTTCCGG
ACCAAGAGGCCGGGACTGGCGGTCAGGGCCGGCGGCTGGGAGATGCTCACCTACGGCTTCTACCTGACCATGGCG
ACGGTTTTCTCGGCCAAGGCCACATTATTCGTCTATCTGATGCCCTTTTTGCTGCTGCGGCTTGCTCTCATGGTT
GGCAACTGGGGACAGCACGCCTTTGTCGATCCGGAAGAGCCGGACTCGGATTATCGGTCGAGCATCACGCTCGTC
GACGTTGCGAGCAACCGGTATTGCTTCAACGATGGATACCACACGTCGCACCACCTCAACCCGCTCCGACACTGG
CGACAGCATCCCATCTCCTTCCTGGAGCAGAAGCAGACGTACGCCGCTGAGGGCGCCCTCGTCTTTCACAACATC
GACTTCCTCATGATTACCCTCAGTCTGCTGCGCAAGGACTATGACCGTCTGGCGAATTGTATGGTGCCAATGGGT
GAACAGCTGGTGCTCGACCACCAGGGACGGGTCGCGCTGCTTAAGAGGCTGACGAGGAGGTTCACTGACGAGGAG
ATTCGTGACAAGCATCGGCTCAAGGGGGTCTGA
Transcript >Ophcf2|00823
ATGGACAGGCTGATATCCCTCGACGACGGCTTGACCATCGCCGACAGGCTCGTACTAGAGAGTCTCGTCGAGGAC
ATCAAGGAGACTGAACCGGTGCGAGACGATGGCGACTCCGGCGTCGGGATCGAGTCCTGCTCGAACGCGGCCAAG
ATACAAGACAAGACGGCGCGCGACATTGACAGGCTCAAGGCAATGAACGACACGCTGAGCTCACAGTTTCAGCCG
ACGGTGCTCCTATCCGTCGATGACTGCTCTCGTCTCGTGCCGTCAGCATTGGACAGACGTGTGCTGCAGCCGTGC
ATCAGGCTGGCGCGAAAGACGGCTCGACACGAGACGGACGTGGTCATGATCACTCATCTGCTTCTCTACCTGTTG
ACGACGGTCCCCAGCGCGCTGATCTTGTATCAGCACTTCACCTTCATCCACGGCATAGCACACGCGGCGATGCAA
GCTTATTACATAGGCACCTACACGCTCATGATGCACCAGCACATCCATCAACGCGGCATTCTTTCGAAGAGACTG
AACCTTCTGGACGGGCTGTTTCCGTATGTGCTCGATCCGCTGATGGGTCACACGTGGAATTCGTACTACTACCAC
CACGTCAAGCATCATCACGTCGAGAACAACGGGCCCCAAGACCTGTCGTCGACCATGGCCTACCAGCGGGACAGC
ATCCGTGATTTTACACGCTACCTCGCCCGCTTCTTCTTTCTCGTCTGGCTCGACCTGTCGCTGTACTTTTTCCGG
ACCAAGAGGCCGGGACTGGCGGTCAGGGCCGGCGGCTGGGAGATGCTCACCTACGGCTTCTACCTGACCATGGCG
ACGGTTTTCTCGGCCAAGGCCACATTATTCGTCTATCTGATGCCCTTTTTGCTGCTGCGGCTTGCTCTCATGGTT
GGCAACTGGGGACAGCACGCCTTTGTCGATCCGGAAGAGCCGGACTCGGATTATCGGTCGAGCATCACGCTCGTC
GACGTTGCGAGCAACCGGTATTGCTTCAACGATGGATACCACACGTCGCACCACCTCAACCCGCTCCGACACTGG
CGACAGCATCCCATCTCCTTCCTGGAGCAGAAGCAGACGTACGCCGCTGAGGGCGCCCTCGTCTTTCACAACATC
GACTTCCTCATGATTACCCTCAGTCTGCTGCGCAAGGACTATGACCGTCTGGCGAATTGTATGGTGCCAATGGGT
GAACAGCTGGTGCTCGACCACCAGGGACGGGTCGCGCTGCTTAAGAGGCTGACGAGGAGGTTCACTGACGAGGAG
ATTCGTGACAAGCATCGGCTCAAGGGGGTCTGA
Gene >Ophcf2|00823
ATGGACAGGCTGATATCCCTCGACGACGGCTTGACCATCGCCGACAGGCTCGTACTAGAGAGTCTCGTCGAGGAC
ATCAAGGAGACTGAACCGGTGCGAGACGATGGCGACTCCGGCGTCGGGATCGAGTCCTGCTCGAACGCGGCCAAG
ATACAAGACAAGACGGCGCGCGACATTGACAGGCTCAAGGCAATGAACGACACGCTGAGCTCACAGTTTCAGCCG
ACGGTGCTCCTATCCGTCGATGACTGCTCTCGTCTCGTGCCGTCAGCATTGGACAGACGTGTGCTGCAGCCGTGC
ATCAGGCTGGCGCGAAAGACGGCTCGACACGAGACGGACGTGGTCATGATCACTCATCTGCTTCTCTACCTGTTG
ACGACGGTCCCCAGCGCGCTGATCTTGTATCAGCACTTCACCTTCATCCACGGCATAGCACACGCGGCGATGCAA
GCTTATTACATAGGCACCTACACGCTCATGATGCACCAGCACATCCATCAACGCGGCATTCTTTCGAAGAGACTG
AACCTTCTGGACGGGCTGTTTCCGTATGTGCTCGATCCGCTGATGGGTCACACGTGGAATTCGTACTACTACCAC
CACGTCAAGCATCATCACGTCGAGAACAACGGGCCCCAAGACCTGTCGTCGACCATGGCCTACCAGCGGGACAGC
ATCCGTGATTTTACACGCTACCTCGCCCGCTTCTTCTTTCTCGTCTGGCTCGACCTGTCGCTGTACTTTTTCCGG
ACCAAGAGGCCGGGACTGGCGGTCAGGGCCGGCGGCTGGGAGATGCTCACCTACGGCTTCTACCTGACCATGGCG
ACGGTTTTCTCGGCCAAGGCCACATTATTCGTCTATCTGATGCCCTTTTTGCTGCTGCGGCTTGCTCTCATGGTT
GGCAACTGGGGACAGCACGCCTTTGTCGATCCGGAAGAGCCGGACTCGGATTATCGGTCGAGCATCACGCTCGTC
GACGTTGCGGTGAGTAGGGATCATCCGGCAGGCCGTCGAGGCTGACCTGAGCAGAGCAACCGGTATTGCTTCAAC
GATGGATACCACACGTCGCACCACCTCAACCCGCTCCGACACTGGCGACAGCATCCCATCTCCTTCCTGGAGCAG
AAGCAGACGTACGCCGCTGAGGGCGCCCTCGTCTTTCACAACATCGACTTCCTCATGATTACCCTCAGTCTGCTG
CGCAAGGACTATGACCGTCTGGCGAATTGTATGGTGCCAATGGGTGAACAGCTGGTGCTCGACCACCAGGGACGG
GTCGCGCTGCTTAAGAGGCTGACGAGGAGGTTCACTGACGAGGAGATTCGTGACAAGCATCGGCTCAAGGGGGTC
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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