Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00807
Gene name
Locationscaffold_01:3169319..3170488
Strand+
Gene length (bp)1169
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 1.0E-25 52 246

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0005575 cellular_component No
GO:0016020 membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 46 68 22
2 156 178 22
3 185 207 22
4 227 249 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00807
MTYVADDRAYQPDNTAQPDGDLAAHQTDNTRPPKTRRRRWLRRLKYTPLASIGIFWLLLGAILLWFIILSGVTRG
TPLKHTYFLRADTSNITGAREITQWAYFRICGDKNRDCHANGAQSFGRAWAPHAENVPPRLGGKWDDHTSSFHYF
MMWRFGWVFLIFVFFFIHVALFGALIACCGRRGSIFTLLMCIITWFWYTLAVSIITAVFCQARSKFHQAGRKARI
GSWAFGFLWGSYACVILACFFFLWASRAFKRKDKDHDDYRPAAGAIGAGAGAAGAAYWRRRSSSLPRRSLDERDR
DDRSQHSRDHRHRNADNQDYDDRTRDEISTSTSEHDWFQQRPKYKEIIA*
Coding >Ophcf2|00807
ATGACATACGTAGCCGACGACAGGGCATACCAGCCTGACAACACGGCACAGCCCGACGGCGATTTGGCAGCCCAT
CAGACCGACAACACGAGACCACCCAAGACGCGAAGACGAAGATGGCTCCGCAGACTGAAATATACCCCCCTCGCC
TCAATCGGCATCTTCTGGCTCCTCCTCGGCGCCATCCTTCTCTGGTTCATCATCCTCAGCGGCGTCACCCGCGGC
ACGCCCCTGAAGCACACCTACTTCCTCCGCGCCGACACCAGCAACATAACGGGCGCCCGCGAAATCACCCAATGG
GCCTACTTCCGCATCTGCGGCGACAAGAACCGCGACTGTCATGCCAATGGCGCCCAGTCGTTTGGAAGAGCCTGG
GCACCGCACGCTGAGAACGTGCCGCCGAGGCTGGGCGGCAAGTGGGATGACCATACGTCTTCCTTTCATTACTTT
ATGATGTGGAGATTTGGATGGGTCTTTCTCATCTTTGTCTTTTTCTTCATTCACGTTGCTCTCTTTGGCGCTCTG
ATTGCTTGCTGTGGCCGTCGGGGCTCCATCTTTACTCTTCTCATGTGTATCATCACCTGGTTCTGGTACACGCTC
GCCGTGTCCATCATCACAGCCGTCTTTTGTCAAGCCCGGAGCAAATTCCATCAAGCAGGACGCAAAGCAAGAATC
GGCTCCTGGGCCTTTGGCTTTCTCTGGGGCTCCTACGCCTGCGTCATACTCGCCTGCTTCTTCTTCCTCTGGGCC
TCGCGAGCCTTCAAGAGAAAGGACAAGGATCACGACGATTACCGGCCTGCCGCCGGAGCCATCGGTGCCGGTGCC
GGGGCTGCGGGTGCCGCATACTGGCGGAGACGCAGCTCCAGCCTGCCGCGACGGAGTCTCGATGAAAGGGATCGT
GACGACCGGAGCCAGCACAGCCGGGACCACCGCCATCGGAACGCCGACAACCAGGACTACGATGACCGCACTCGA
GACGAGATTAGCACCTCCACATCCGAGCACGATTGGTTTCAACAACGCCCCAAGTACAAGGAAATAATAGCCTGA
Transcript >Ophcf2|00807
ATGACATACGTAGCCGACGACAGGGCATACCAGCCTGACAACACGGCACAGCCCGACGGCGATTTGGCAGCCCAT
CAGACCGACAACACGAGACCACCCAAGACGCGAAGACGAAGATGGCTCCGCAGACTGAAATATACCCCCCTCGCC
TCAATCGGCATCTTCTGGCTCCTCCTCGGCGCCATCCTTCTCTGGTTCATCATCCTCAGCGGCGTCACCCGCGGC
ACGCCCCTGAAGCACACCTACTTCCTCCGCGCCGACACCAGCAACATAACGGGCGCCCGCGAAATCACCCAATGG
GCCTACTTCCGCATCTGCGGCGACAAGAACCGCGACTGTCATGCCAATGGCGCCCAGTCGTTTGGAAGAGCCTGG
GCACCGCACGCTGAGAACGTGCCGCCGAGGCTGGGCGGCAAGTGGGATGACCATACGTCTTCCTTTCATTACTTT
ATGATGTGGAGATTTGGATGGGTCTTTCTCATCTTTGTCTTTTTCTTCATTCACGTTGCTCTCTTTGGCGCTCTG
ATTGCTTGCTGTGGCCGTCGGGGCTCCATCTTTACTCTTCTCATGTGTATCATCACCTGGTTCTGGTACACGCTC
GCCGTGTCCATCATCACAGCCGTCTTTTGTCAAGCCCGGAGCAAATTCCATCAAGCAGGACGCAAAGCAAGAATC
GGCTCCTGGGCCTTTGGCTTTCTCTGGGGCTCCTACGCCTGCGTCATACTCGCCTGCTTCTTCTTCCTCTGGGCC
TCGCGAGCCTTCAAGAGAAAGGACAAGGATCACGACGATTACCGGCCTGCCGCCGGAGCCATCGGTGCCGGTGCC
GGGGCTGCGGGTGCCGCATACTGGCGGAGACGCAGCTCCAGCCTGCCGCGACGGAGTCTCGATGAAAGGGATCGT
GACGACCGGAGCCAGCACAGCCGGGACCACCGCCATCGGAACGCCGACAACCAGGACTACGATGACCGCACTCGA
GACGAGATTAGCACCTCCACATCCGAGCACGATTGGTTTCAACAACGCCCCAAGTACAAGGAAATAATAGCCTGA
Gene >Ophcf2|00807
ATGACATACGTAGCCGACGACAGGGCATACCAGCCTGACAACACGGCACAGCCCGACGGCGATTTGGCAGCCCAT
CAGACCGACAACACGAGACCACCCAAGACGCGAAGACGAAGATGGCTCCGCAGACTGAAATGTGAGTCTTGCTTC
ACTCCTTTCATCCTAAGCCGGATCCTCGTCCGTCACACCACTAACACAATCAGATACCCCCCTCGCCTCAATCGG
CATCTTCTGGCTCCTCCTCGGCGCCATCCTTCTCTGGTTCATCATCCTCAGCGGCGTCACCCGCGGCACGCCCCT
GAAGCACACCTACTTCCTCCGCGCCGACACCAGCAACATAACGGGCGCCCGCGAAATCACCCAATGGGCCTACTT
CCGCATCTGCGGCGACAAGAACCGCGACTGTCATGCCAATGGCGCCCAGTCGTTTGGAAGAGCCTGGGCACCGCA
CGCTGAGAACGTGCCGCCGAGGCTGGGCGGCAAGTGGGATGACCATACGTCTTCCTTTCATTACTTTATGATGTG
GAGATTTGGATGGGTCTTTCTCATCTTTGTCTTTTTCTTCATTCACGTTGCTCTCTTTGGCGCTCTGATTGCTTG
CTGTGGCCGTCGGGGCTCCATCTTTACTCTTCTCATGTGTATCATCACCTGGTTCTGGTACACGCTCGCCGTGTC
CATCATCACGTACGACGCACTTTCTCTCTCCCTACACTTCATTATAGCTAACCCTGCAAAGAGCCGTCTTTTGTC
AAGCCCGGAGCAAATTCCATCAAGCAGGACGCAAAGCAAGAATCGGCTCCTGGGCCTTTGGCTTTCTCTGGGGCT
CCTACGCCTGCGTCATACTCGCCTGCTTCTTCTTCCTCTGGGCCTCGCGAGCCTTCAAGAGAAAGGACAAGGATC
ACGACGATTACCGGCCTGCCGCCGGAGCCATCGGTGCCGGTGCCGGGGCTGCGGGTGCCGCATACTGGCGGAGAC
GCAGCTCCAGCCTGCCGCGACGGAGTCTCGATGAAAGGGATCGTGACGACCGGAGCCAGCACAGCCGGGACCACC
GCCATCGGAACGCCGACAACCAGGACTACGATGACCGCACTCGAGACGAGATTAGCACCTCCACATCCGAGCACG
ATTGGTTTCAACAACGCCCCAAGTACAAGGAAATAATAGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail