Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|00749
Gene name
Location	scaffold_01:2867045..2867691
Strand	-
Gene length (bp)	646
Transcript length (bp)	597
Coding sequence length (bp)	597
Protein length (aa)	199

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 18	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	84	106	22
3	118	140	22
4	155	177	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|00749 MTRVSIYASALAAFVAATAMLVASIAAPNWIVYAVTTAKGDHVGKTIGLNRSCSDLSTPRCREYPPAEMCENGAR YFCSLWRTIGFMASLSTILCLACLTSFFVVLRGGKFKRETGWVFVAGMLTVVAVFELVLISMVAYLFDHDEQFGV PGWHLGVSWYLATFSAVVCVLSAAGLVASAYLMPPEGGYESVPDPDDG*
Coding	>Ophcf2\|00749 ATGACGCGCGTTTCCATCTACGCCTCTGCCCTCGCTGCCTTTGTGGCCGCGACGGCCATGCTCGTTGCTTCTATC GCAGCACCCAACTGGATTGTCTACGCTGTCACGACGGCCAAGGGCGATCATGTCGGCAAGACGATTGGGTTGAAC AGGAGCTGCTCCGATCTCAGCACGCCGCGTTGTCGCGAGTACCCCCCGGCCGAGATGTGCGAAAACGGAGCTCGA TATTTTTGCTCGTTGTGGCGCACCATCGGCTTCATGGCTTCGCTGTCGACCATCCTGTGTCTTGCTTGCCTGACG AGCTTCTTCGTTGTGCTGCGGGGCGGCAAGTTTAAGCGCGAGACGGGCTGGGTGTTTGTTGCTGGCATGTTGACT GTCGTGGCTGTCTTTGAGTTGGTGCTCATCTCCATGGTTGCCTATCTGTTTGACCACGATGAGCAGTTTGGTGTT CCGGGTTGGCATCTTGGTGTTTCGTGGTATCTTGCTACCTTTAGCGCTGTGGTTTGCGTCCTCTCTGCTGCTGGG CTGGTGGCTTCGGCGTATCTGATGCCGCCTGAGGGGGGTTACGAATCGGTGCCGGATCCTGACGACGGCTGA
Transcript	>Ophcf2\|00749 ATGACGCGCGTTTCCATCTACGCCTCTGCCCTCGCTGCCTTTGTGGCCGCGACGGCCATGCTCGTTGCTTCTATC GCAGCACCCAACTGGATTGTCTACGCTGTCACGACGGCCAAGGGCGATCATGTCGGCAAGACGATTGGGTTGAAC AGGAGCTGCTCCGATCTCAGCACGCCGCGTTGTCGCGAGTACCCCCCGGCCGAGATGTGCGAAAACGGAGCTCGA TATTTTTGCTCGTTGTGGCGCACCATCGGCTTCATGGCTTCGCTGTCGACCATCCTGTGTCTTGCTTGCCTGACG AGCTTCTTCGTTGTGCTGCGGGGCGGCAAGTTTAAGCGCGAGACGGGCTGGGTGTTTGTTGCTGGCATGTTGACT GTCGTGGCTGTCTTTGAGTTGGTGCTCATCTCCATGGTTGCCTATCTGTTTGACCACGATGAGCAGTTTGGTGTT CCGGGTTGGCATCTTGGTGTTTCGTGGTATCTTGCTACCTTTAGCGCTGTGGTTTGCGTCCTCTCTGCTGCTGGG CTGGTGGCTTCGGCGTATCTGATGCCGCCTGAGGGGGGTTACGAATCGGTGCCGGATCCTGACGACGGCTGA
Gene	>Ophcf2\|00749 ATGACGCGCGTTTCCATCTACGCCTCTGCCCTCGCTGCCTTTGTGGCCGGTTCGTCTTCTCCCGCCTTGACCGAG AAGTAGCTAGCTGACGAAAGCAGCGACGGCCATGCTCGTTGCTTCTATCGCAGCACCCAACTGGATTGTCTACGC TGTCACGACGGCCAAGGGCGATCATGTCGGCAAGACGATTGGGTTGAACAGGAGCTGCTCCGATCTCAGCACGCC GCGTTGTCGCGAGTACCCCCCGGCCGAGATGTGCGAAAACGGAGCTCGATATTTTTGCTCGTTGTGGCGCACCAT CGGCTTCATGGCTTCGCTGTCGACCATCCTGTGTCTTGCTTGCCTGACGAGCTTCTTCGTTGTGCTGCGGGGCGG CAAGTTTAAGCGCGAGACGGGCTGGGTGTTTGTTGCTGGCATGTTGACTGTCGTGGCTGTCTTTGAGTTGGTGCT CATCTCCATGGTTGCCTATCTGTTTGACCACGATGAGCAGTTTGGTGTTCCGGGTTGGCATCTTGGTGTTTCGTG GTATCTTGCTACCTTTAGCGCTGTGGTTTGCGTCCTCTCTGCTGCTGGGCTGGTGGCTTCGGCGTATCTGATGCC GCCTGAGGGGGGTTACGAATCGGTGCCGGATCCTGACGACGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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