Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00716
Gene name
Locationscaffold_01:2704601..2705891
Strand-
Gene length (bp)1290
Transcript length (bp)1062
Coding sequence length (bp)1062
Protein length (aa) 354

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 48 70 22
3 99 121 22
4 134 156 22
5 181 203 22
6 216 238 22
7 253 275 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00716
MESDTALAVEGYLYFSIEILLIIWRICERWVTNTFRGLATDDYLMMVAALWNIIGTAASSFIVFITHGLANSGIT
DAERALLSPESDEFKLRVQGSKAHLVGWVSFATLLWTLKLCWLFFYKRLGYRVDRMAFKVNVGLVFCGVAYAVLI
CAILFGCVPLWKSWQINPDPGNFCHPASATLQVWVMVVSDVATDLYITIIPLPMIWNARITRVNKIGLLIMFCGG
LATMSFSITRFVIIITNNGDEDTQLSSIWSDREAFVAVFVTNVPVLVPLLRKRFWNIRDKSIASVSASRGRDNWN
RSRDETTKASRESIASTSSLPKKVLSASAESFCGSESDETYSPRRDRNMRLGM*
Coding >Ophcf2|00716
ATGGAGTCCGACACTGCCCTAGCCGTTGAGGGATATTTGTACTTCTCCATCGAAATTCTATTGATTATATGGCGG
ATATGCGAAAGATGGGTGACGAATACGTTCCGCGGCCTCGCAACTGACGATTACCTCATGATGGTAGCGGCCCTT
TGGAATATTATCGGGACGGCAGCCTCTTCCTTCATCGTCTTCATCACGCATGGGCTGGCCAACAGCGGCATCACC
GACGCAGAGCGCGCACTTCTAAGTCCCGAAAGCGATGAGTTCAAACTTCGAGTCCAAGGGTCCAAGGCGCATCTA
GTCGGCTGGGTGAGTTTTGCGACTCTGCTGTGGACTCTGAAGCTCTGCTGGCTATTCTTCTACAAACGACTCGGC
TATCGAGTGGATCGGATGGCGTTCAAGGTAAACGTTGGCTTGGTGTTTTGCGGCGTAGCTTACGCGGTTCTCATC
TGCGCCATCTTGTTCGGATGCGTGCCCTTGTGGAAGTCTTGGCAGATCAACCCCGACCCTGGAAACTTTTGCCAT
CCGGCTTCTGCAACTCTTCAGGTTTGGGTCATGGTCGTCTCCGACGTTGCTACCGACCTGTATATTACCATCATT
CCCCTTCCGATGATATGGAATGCCCGCATCACCAGAGTGAACAAGATTGGCCTGCTCATCATGTTCTGCGGCGGC
CTTGCCACCATGAGCTTCAGCATCACCCGATTCGTCATAATCATCACCAACAATGGCGACGAGGATACCCAACTG
TCTTCCATTTGGTCCGACCGCGAGGCCTTTGTCGCCGTATTCGTCACCAACGTCCCCGTACTCGTACCGCTGTTG
AGGAAGCGCTTCTGGAATATACGAGACAAGTCAATCGCCAGCGTCAGCGCTTCACGTGGGAGAGACAACTGGAAT
CGAAGCCGCGACGAGACAACCAAGGCGAGCCGGGAGAGCATTGCGTCTACGTCGTCGCTACCGAAAAAGGTGCTG
AGCGCGAGCGCCGAAAGCTTCTGCGGCAGTGAGTCGGACGAGACATACAGTCCTCGCAGAGACCGCAACATGCGT
CTAGGCATGTGA
Transcript >Ophcf2|00716
ATGGAGTCCGACACTGCCCTAGCCGTTGAGGGATATTTGTACTTCTCCATCGAAATTCTATTGATTATATGGCGG
ATATGCGAAAGATGGGTGACGAATACGTTCCGCGGCCTCGCAACTGACGATTACCTCATGATGGTAGCGGCCCTT
TGGAATATTATCGGGACGGCAGCCTCTTCCTTCATCGTCTTCATCACGCATGGGCTGGCCAACAGCGGCATCACC
GACGCAGAGCGCGCACTTCTAAGTCCCGAAAGCGATGAGTTCAAACTTCGAGTCCAAGGGTCCAAGGCGCATCTA
GTCGGCTGGGTGAGTTTTGCGACTCTGCTGTGGACTCTGAAGCTCTGCTGGCTATTCTTCTACAAACGACTCGGC
TATCGAGTGGATCGGATGGCGTTCAAGGTAAACGTTGGCTTGGTGTTTTGCGGCGTAGCTTACGCGGTTCTCATC
TGCGCCATCTTGTTCGGATGCGTGCCCTTGTGGAAGTCTTGGCAGATCAACCCCGACCCTGGAAACTTTTGCCAT
CCGGCTTCTGCAACTCTTCAGGTTTGGGTCATGGTCGTCTCCGACGTTGCTACCGACCTGTATATTACCATCATT
CCCCTTCCGATGATATGGAATGCCCGCATCACCAGAGTGAACAAGATTGGCCTGCTCATCATGTTCTGCGGCGGC
CTTGCCACCATGAGCTTCAGCATCACCCGATTCGTCATAATCATCACCAACAATGGCGACGAGGATACCCAACTG
TCTTCCATTTGGTCCGACCGCGAGGCCTTTGTCGCCGTATTCGTCACCAACGTCCCCGTACTCGTACCGCTGTTG
AGGAAGCGCTTCTGGAATATACGAGACAAGTCAATCGCCAGCGTCAGCGCTTCACGTGGGAGAGACAACTGGAAT
CGAAGCCGCGACGAGACAACCAAGGCGAGCCGGGAGAGCATTGCGTCTACGTCGTCGCTACCGAAAAAGGTGCTG
AGCGCGAGCGCCGAAAGCTTCTGCGGCAGTGAGTCGGACGAGACATACAGTCCTCGCAGAGACCGCAACATGCGT
CTAGGCATGTGA
Gene >Ophcf2|00716
ATGGAGTCCGACACTGCCCTAGCCGTTGAGGGATATTTGTACTTCTCCATCGAAATTCTATTGATTATATGGCGG
ATATGCGAAAGATGGGTGACGAATACGTTCCGCGGCCTCGCAACTGACGATTACCTCATGATGGTAGCGGCCGTA
AGCAGTCTCCAATCAATGCCAACTACCTCCTCGGACGCTGACAGACGATGAATAGCTTTGGAATATTATCGGGAC
GGCAGCCTCTTCCTTCATCGTCTTCATCACGCATGGGCTGGCCAACAGCGGGTACGACGACCTCGAAGCCGTCAA
GGCTCGCAGGCTAACAGTTCCGCAGCATCACCGACGCAGAGCGCGCACTTCTAAGTCCCGAAAGCGATGAGTTCA
AACTTCGAGTCCAAGGGTCCAAGGCGCATCTAGTCGGCTGGGTGAGTTTTGCGACTCTGCTGTGGACTCTGAAGC
TCTGCTGGCTATTCTTCTACAAACGACTCGGCTATCGAGTGGATCGGATGGCGTTCAAGGTAAACGTTGGCTTGG
TGTTTTGCGGCGTAGCTTACGCGGTTCTCATCTGCGCCATCTTGTTCGGATGCGTGCCCTTGTGGAAGTCTTGGC
AGATCAACCCCGACCCTGGAAGTTCGTTGCCGGCCCTTGGGCATTGAAGAAATGTTTGCTGATAGAAGAGGGTGT
ACAGACTTTTGCCATCCGGCTTCTGCAACTCTTCAGGTTTGGGTCATGGTCGTCTCCGACGTTGCTACCGACCTG
TATATTACCATCATTCCCCTTCCGGTGAGGCAGGCTCGACTTTTGTCCGTTTCGGAGACAACGTCCGTCCTAACG
AGCTGTCGACAGATGATATGGAATGCCCGCATCACCAGAGTGAACAAGATTGGCCTGCTCATCATGTTCTGCGGC
GGCCTTGCCACCATGAGCTTCAGCATCACCCGATTCGTCATAATCATCACCAACAATGGCGACGAGGATACCCAA
CTGTCTTCCATTTGGTCCGACCGCGAGGCCTTTGTCGCCGTATTCGTCACCAACGTCCCCGTACTCGTACCGCTG
TTGAGGAAGCGCTTCTGGAATATACGAGACAAGTCAATCGCCAGCGTCAGCGCTTCACGTGGGAGAGACAACTGG
AATCGAAGCCGCGACGAGACAACCAAGGCGAGCCGGGAGAGCATTGCGTCTACGTCGTCGCTACCGAAAAAGGTG
CTGAGCGCGAGCGCCGAAAGCTTCTGCGGCAGTGAGTCGGACGAGACATACAGTCCTCGCAGAGACCGCAACATG
CGTCTAGGCATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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