Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00710
Gene name
Locationscaffold_01:2694258..2695080
Strand+
Gene length (bp)822
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00226 DnaJ DnaJ domain 4.1E-18 27 88

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 220 242 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00710
MTPIITARPTLYRSIRLLHTSPPKATDLYARLGVKRDASAAEIKRSFYALSKTHHPDVNPSPTASSSFSLLADAY
AILSDPPRRAAYDATLPAAFPPPPRRRPPGPFRGPAPSFYRNGGWGIHASVRRRAHQESTGFAARVRASRRGRGD
DGDGGKGGRKQPGMGPGQEPLSERAGNLNFDWEGHARTHKREDHRRWERMRRAVDEDGTEFEPQLSLAGNFCVLA
AILGVALGGPFVYLYVLRYKRRRRDLD*
Coding >Ophcf2|00710
ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC
ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC
TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC
GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT
CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG
GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT
GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT
GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG
CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC
GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT
CTTGATTGA
Transcript >Ophcf2|00710
ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC
ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC
TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC
GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT
CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG
GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT
GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT
GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG
CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC
GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT
CTTGATTGA
Gene >Ophcf2|00710
ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC
ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGGTCCGTCCTCTTCCAA
TCCAACAAAAACAACCAACCACCATCTAACGAAACCGAAAAACCCAGATCCTTCTACGCCCTCTCCAAAACCCAC
CATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTACGCCATCCTCTCC
GACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGTCGAAGACCTCCG
GGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCGGTTCGGCGGCGC
GCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGATGATGGCGATGGG
GGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCTGGGAATTTGAAT
TTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATGCGTCGTGCCGTT
GATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCCGCTATATTGGGG
GTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGATCTTGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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