Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|00710
Gene name
Location	scaffold_01:2694258..2695080
Strand	+
Gene length (bp)	822
Transcript length (bp)	759
Coding sequence length (bp)	759
Protein length (aa)	253

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00226	DnaJ	DnaJ domain	4.1E-18	27	88

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	220	242	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|00710 MTPIITARPTLYRSIRLLHTSPPKATDLYARLGVKRDASAAEIKRSFYALSKTHHPDVNPSPTASSSFSLLADAY AILSDPPRRAAYDATLPAAFPPPPRRRPPGPFRGPAPSFYRNGGWGIHASVRRRAHQESTGFAARVRASRRGRGD DGDGGKGGRKQPGMGPGQEPLSERAGNLNFDWEGHARTHKREDHRRWERMRRAVDEDGTEFEPQLSLAGNFCVLA AILGVALGGPFVYLYVLRYKRRRRDLD*
Coding	>Ophcf2\|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT CTTGATTGA
Transcript	>Ophcf2\|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT CTTGATTGA
Gene	>Ophcf2\|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGGTCCGTCCTCTTCCAA TCCAACAAAAACAACCAACCACCATCTAACGAAACCGAAAAACCCAGATCCTTCTACGCCCTCTCCAAAACCCAC CATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTACGCCATCCTCTCC GACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGTCGAAGACCTCCG GGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCGGTTCGGCGGCGC GCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGATGATGGCGATGGG GGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCTGGGAATTTGAAT TTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATGCGTCGTGCCGTT GATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCCGCTATATTGGGG GTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGATCTTGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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