Protein ID | Ophcf2|00710 |
Gene name | |
Location | scaffold_01:2694258..2695080 |
Strand | + |
Gene length (bp) | 822 |
Transcript length (bp) | 759 |
Coding sequence length (bp) | 759 |
Protein length (aa) | 253 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 4.1E-18 | 27 | 88 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 220 | 242 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00710 MTPIITARPTLYRSIRLLHTSPPKATDLYARLGVKRDASAAEIKRSFYALSKTHHPDVNPSPTASSSFSLLADAY AILSDPPRRAAYDATLPAAFPPPPRRRPPGPFRGPAPSFYRNGGWGIHASVRRRAHQESTGFAARVRASRRGRGD DGDGGKGGRKQPGMGPGQEPLSERAGNLNFDWEGHARTHKREDHRRWERMRRAVDEDGTEFEPQLSLAGNFCVLA AILGVALGGPFVYLYVLRYKRRRRDLD* |
Coding | >Ophcf2|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT CTTGATTGA |
Transcript | >Ophcf2|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGATCCTTCTACGCCCTC TCCAAAACCCACCATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTAC GCCATCCTCTCCGACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGT CGAAGACCTCCGGGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCG GTTCGGCGGCGCGCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGAT GATGGCGATGGGGGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCT GGGAATTTGAATTTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATG CGTCGTGCCGTTGATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCC GCTATATTGGGGGTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGAT CTTGATTGA |
Gene | >Ophcf2|00710 ATGACCCCCATCATCACCGCAAGACCAACCCTCTACCGCTCAATCCGCCTCCTCCACACCTCCCCCCCGAAAGCC ACCGATCTATACGCCCGTCTAGGCGTCAAACGCGATGCCTCCGCCGCCGAGATCAAACGGTCCGTCCTCTTCCAA TCCAACAAAAACAACCAACCACCATCTAACGAAACCGAAAAACCCAGATCCTTCTACGCCCTCTCCAAAACCCAC CATCCAGACGTGAACCCTTCCCCCACCGCATCCTCCTCCTTCTCCCTCCTGGCAGACGCCTACGCCATCCTCTCC GACCCCCCCCGTCGCGCAGCCTACGACGCCACCCTCCCAGCAGCCTTCCCACCCCCCCCCCGTCGAAGACCTCCG GGGCCCTTCCGCGGACCGGCTCCGAGCTTCTACCGTAACGGCGGGTGGGGCATCCACGCTTCGGTTCGGCGGCGC GCCCATCAGGAATCTACGGGGTTCGCAGCTCGGGTGCGCGCCTCTCGACGGGGACGCGGTGATGATGGCGATGGG GGGAAGGGCGGGCGGAAACAGCCTGGGATGGGACCCGGACAGGAGCCCTTGAGTGAGCGAGCTGGGAATTTGAAT TTCGACTGGGAGGGTCATGCGCGGACGCATAAGAGGGAGGATCATCGTCGGTGGGAGCGGATGCGTCGTGCCGTT GATGAGGATGGCACCGAGTTTGAGCCGCAGCTGAGTCTTGCCGGTAATTTTTGCGTGCTTGCCGCTATATTGGGG GTTGCTCTTGGTGGGCCGTTCGTCTATCTGTATGTCTTGCGGTATAAACGCCGGAGGAGGGATCTTGATTGA |