Protein ID | Ophcf2|00709 |
Gene name | |
Location | scaffold_01:2692093..2693933 |
Strand | + |
Gene length (bp) | 1840 |
Transcript length (bp) | 1746 |
Coding sequence length (bp) | 1746 |
Protein length (aa) | 582 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01532 | Glyco_hydro_47 | Glycosyl hydrolase family 47 | 7.0E-158 | 103 | 577 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0005509 | calcium ion binding | Yes |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0015924 | mannosyl-oligosaccharide mannosidase activity | No |
GO:0016787 | hydrolase activity | No |
GO:0005488 | binding | No |
GO:0046872 | metal ion binding | No |
GO:0003674 | molecular_function | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
GO:0015923 | mannosidase activity | No |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
GO:0004559 | alpha-mannosidase activity | No |
GO:0005575 | cellular_component | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide | 0.1482 | 0.1744 | 0.3581 | 0.0829 | 0.2427 | 0.0076 | 0.4906 | 0.2352 | 0.7559 | 0.0397 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 32 | 19 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH47 | 4.2E-151 | 103 | 577 |
Orthofinder run ID | 4 |
Orthogroup | 37 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00709 MLNQQMKQGRCGRRLGVLSVLATLAIILTLLLGRHGPRMTTAGGVRYVASSFDWSRVKPSHPVVSLQRPPTGRPK TLPRIQTRTKSTGGQEVARARRDAVRRAFVKSWEAYKAHAWGKDELMPLSGKGRQSFSGHAAQLIDALDTLWIMG LRADFRLALAEVAVVDWSRVQDGKPLDVFELTIRHLGGLLAAYDLSAESVLLFKAIELGDMLYAAFDTPNRLPTR WLDPARARSGQQKAEPSMPTAAAGSLCLELTRLSQLTGDARYYDAGERVKQFFRRTQSDTKMPGLWPRVVDLRDE TADGDVFTLGAGADSLYEYLPKMHALLGGLDPDYEDMASRALDAAHERLLFRPATPRDEKVLMAGRLAWDDGRAT LTPEMQHLTCFAGGTYALAGRLLSRKDYVGLGSRLAAGCVWAYDSFATNIMPEISEVEACRQLDGPCRLDGDDHQ TKDGGLPTVTTGGRENLPAGFVRVRDARYLLRPEAIESVFYLWRITGDGTWRDAAWRMWEGIVRETETELAFASV EDVRVRGSPKADSMETFWLSETTKYFYLVFEDESVISLDDWVLNTEAHPLKRPRPG* |
Coding | >Ophcf2|00709 ATGCTGAACCAGCAGATGAAGCAGGGCCGCTGTGGTCGTCGGCTCGGCGTCTTATCCGTGTTGGCGACGCTGGCC ATCATCCTGACCCTTCTCCTCGGTCGTCACGGTCCGAGAATGACGACAGCCGGTGGCGTTCGGTACGTGGCCAGC AGCTTCGACTGGTCACGGGTCAAGCCCTCGCATCCGGTCGTGAGCCTGCAGCGTCCTCCCACGGGCCGGCCCAAG ACCCTTCCGCGGATCCAGACTCGGACCAAGTCGACGGGCGGCCAAGAGGTGGCGCGGGCACGTCGAGATGCCGTT CGCAGGGCCTTTGTCAAGAGCTGGGAGGCTTACAAGGCGCATGCTTGGGGCAAGGACGAACTGATGCCGCTGTCG GGCAAGGGTCGGCAGAGCTTCTCGGGCCACGCGGCGCAGCTGATCGACGCTCTCGATACGCTCTGGATCATGGGC CTTCGCGCCGACTTTAGACTGGCGCTGGCTGAGGTGGCCGTCGTCGACTGGTCCAGGGTGCAGGACGGCAAGCCA CTCGACGTGTTTGAGCTGACGATCCGTCACCTGGGCGGCCTGCTGGCGGCCTACGATCTCTCGGCCGAGTCCGTA CTACTCTTCAAGGCCATCGAACTGGGAGACATGCTGTACGCCGCCTTTGACACTCCCAACCGACTGCCGACACGC TGGCTCGACCCGGCGCGCGCCCGAAGCGGACAGCAAAAGGCGGAACCGAGTATGCCGACGGCCGCGGCCGGGTCG TTGTGCCTGGAGCTCACCCGCCTCAGCCAGCTGACGGGCGACGCTCGTTACTACGACGCCGGTGAGAGGGTCAAG CAGTTCTTTCGGCGCACGCAGTCGGATACCAAGATGCCCGGGCTGTGGCCGCGTGTGGTGGACCTGCGGGACGAG ACGGCCGACGGCGACGTCTTCACGCTCGGAGCCGGAGCCGACTCGCTGTACGAGTATCTGCCCAAGATGCACGCC TTGCTCGGCGGCCTGGACCCGGACTACGAAGACATGGCGTCACGGGCGCTCGACGCCGCCCACGAGCGGCTGCTC TTCCGACCGGCTACGCCCAGAGATGAAAAGGTGCTGATGGCGGGTAGGCTGGCGTGGGACGACGGGCGGGCAACT CTCACGCCCGAGATGCAGCACCTGACGTGCTTCGCCGGGGGAACCTATGCGCTCGCGGGACGGCTGCTCTCACGC AAAGACTACGTCGGTCTGGGCTCTCGTCTGGCGGCCGGCTGCGTGTGGGCGTACGACTCGTTTGCCACCAACATC ATGCCCGAGATATCCGAGGTAGAGGCCTGTCGACAACTGGACGGACCGTGCCGACTAGACGGAGACGATCATCAG ACCAAAGACGGCGGCCTTCCGACGGTGACGACGGGCGGACGCGAGAACCTACCGGCCGGGTTCGTACGGGTGAGG GACGCGCGGTACCTGCTCCGTCCCGAGGCCATCGAGAGCGTCTTCTACCTTTGGCGCATAACGGGAGATGGGACC TGGCGGGACGCGGCGTGGAGGATGTGGGAGGGTATCGTGAGGGAGACGGAGACGGAGCTTGCCTTTGCGTCGGTC GAGGATGTGAGGGTTAGGGGGAGTCCCAAGGCTGACTCTATGGAGACGTTTTGGCTATCGGAGACGACCAAGTAC TTTTACCTCGTCTTTGAAGACGAGAGCGTCATCAGCCTCGACGACTGGGTCCTCAATACCGAAGCTCACCCTCTC AAGCGGCCGCGGCCGGGATAG |
Transcript | >Ophcf2|00709 ATGCTGAACCAGCAGATGAAGCAGGGCCGCTGTGGTCGTCGGCTCGGCGTCTTATCCGTGTTGGCGACGCTGGCC ATCATCCTGACCCTTCTCCTCGGTCGTCACGGTCCGAGAATGACGACAGCCGGTGGCGTTCGGTACGTGGCCAGC AGCTTCGACTGGTCACGGGTCAAGCCCTCGCATCCGGTCGTGAGCCTGCAGCGTCCTCCCACGGGCCGGCCCAAG ACCCTTCCGCGGATCCAGACTCGGACCAAGTCGACGGGCGGCCAAGAGGTGGCGCGGGCACGTCGAGATGCCGTT CGCAGGGCCTTTGTCAAGAGCTGGGAGGCTTACAAGGCGCATGCTTGGGGCAAGGACGAACTGATGCCGCTGTCG GGCAAGGGTCGGCAGAGCTTCTCGGGCCACGCGGCGCAGCTGATCGACGCTCTCGATACGCTCTGGATCATGGGC CTTCGCGCCGACTTTAGACTGGCGCTGGCTGAGGTGGCCGTCGTCGACTGGTCCAGGGTGCAGGACGGCAAGCCA CTCGACGTGTTTGAGCTGACGATCCGTCACCTGGGCGGCCTGCTGGCGGCCTACGATCTCTCGGCCGAGTCCGTA CTACTCTTCAAGGCCATCGAACTGGGAGACATGCTGTACGCCGCCTTTGACACTCCCAACCGACTGCCGACACGC TGGCTCGACCCGGCGCGCGCCCGAAGCGGACAGCAAAAGGCGGAACCGAGTATGCCGACGGCCGCGGCCGGGTCG TTGTGCCTGGAGCTCACCCGCCTCAGCCAGCTGACGGGCGACGCTCGTTACTACGACGCCGGTGAGAGGGTCAAG CAGTTCTTTCGGCGCACGCAGTCGGATACCAAGATGCCCGGGCTGTGGCCGCGTGTGGTGGACCTGCGGGACGAG ACGGCCGACGGCGACGTCTTCACGCTCGGAGCCGGAGCCGACTCGCTGTACGAGTATCTGCCCAAGATGCACGCC TTGCTCGGCGGCCTGGACCCGGACTACGAAGACATGGCGTCACGGGCGCTCGACGCCGCCCACGAGCGGCTGCTC TTCCGACCGGCTACGCCCAGAGATGAAAAGGTGCTGATGGCGGGTAGGCTGGCGTGGGACGACGGGCGGGCAACT CTCACGCCCGAGATGCAGCACCTGACGTGCTTCGCCGGGGGAACCTATGCGCTCGCGGGACGGCTGCTCTCACGC AAAGACTACGTCGGTCTGGGCTCTCGTCTGGCGGCCGGCTGCGTGTGGGCGTACGACTCGTTTGCCACCAACATC ATGCCCGAGATATCCGAGGTAGAGGCCTGTCGACAACTGGACGGACCGTGCCGACTAGACGGAGACGATCATCAG ACCAAAGACGGCGGCCTTCCGACGGTGACGACGGGCGGACGCGAGAACCTACCGGCCGGGTTCGTACGGGTGAGG GACGCGCGGTACCTGCTCCGTCCCGAGGCCATCGAGAGCGTCTTCTACCTTTGGCGCATAACGGGAGATGGGACC TGGCGGGACGCGGCGTGGAGGATGTGGGAGGGTATCGTGAGGGAGACGGAGACGGAGCTTGCCTTTGCGTCGGTC GAGGATGTGAGGGTTAGGGGGAGTCCCAAGGCTGACTCTATGGAGACGTTTTGGCTATCGGAGACGACCAAGTAC TTTTACCTCGTCTTTGAAGACGAGAGCGTCATCAGCCTCGACGACTGGGTCCTCAATACCGAAGCTCACCCTCTC AAGCGGCCGCGGCCGGGATAG |
Gene | >Ophcf2|00709 ATGCTGAACCAGCAGATGAAGCAGGGCCGCTGTGGTCGTCGGCTCGGCGTCTTATCCGTGTTGGCGACGCTGGCC ATCATCCTGACCCTTCTCCTCGGTCGTCACGGTCCGAGAATGACGACAGCCGGTGGCGTTCGGTACGTGGCCAGC AGCTTCGACTGGTCACGGGTCAAGCCCTCGCATCCGGTCGTGAGCCTGCAGCGTCCTCCCACGGGCCGGCCCAAG ACCCTTCCGCGGATCCAGACTCGGACCAAGTCGACGGGCGGCCAAGAGGTGGCGCGGGCACGTCGAGATGCCGTT CGCAGGGCCTTTGTCAAGAGCTGGGAGGCTTACAAGGCGCATGCTTGGGGCAAGGACGAACTGATGCCGCTGTCG GGCAAGGGTCGGCAGAGCTTCTCGGGCCACGCGGCGCAGCTGATCGACGCTCTCGATACGCTCTGGATCATGGGC CTTCGCGCCGACTTTAGACTGGCGCTGGCTGAGGTGGCCGTCGTCGACTGGTCCAGGGTGCAGGACGGCAAGCCA CTCGACGTGTTTGAGCTGACGATCCGTCACCTGGGCGGCCTGCTGGCGGCCTACGATCTCTCGGCCGAGTCCGTA CTACTCTTCAAGGCCATCGAACTGGGAGACATGCTGTACGCCGCCTTTGACACTCCCAACCGACTGCCGACACGC TGGCTCGACCCGGCGCGCGCCCGAAGCGGACAGCAAAAGGCGGAACCGAGTATGCCGACGGCCGCGGCCGGGTCG TTGTGCCTGGAGCTCACCCGCCTCAGCCAGCTGACGGGCGACGCTCGTTACTACGACGCCGGTGAGAGGGTCAAG CAGTTCTTTCGGCGCACGCAGTCGGATACCAAGATGCCCGGGCTGTGGCCGCGTGTGGTGGACCTGCGGGACGAG ACGGCCGACGGCGACGTCTTCACGCTCGGAGCCGGAGCCGACTCGCTGTACGAGTATCTGCCCAAGATGCACGCC TTGCTCGGCGGCCTGGACCCGGACTACGAAGACATGGCGTCACGGGCGCTCGACGCCGCCCACGAGCGGCTGCTC TTCCGACCGGCTACGCCCAGAGATGAAAAGGTGCTGATGGCGGGTAGGCTGGCGTGGGACGACGGGCGGGCAACT CTCACGCCCGAGATGCAGCACCTGACGTGCTTCGCCGGGGGAACCTATGCGCTCGCGGGACGGCTGCTCTCACGC AAAGACTACGTCGGTCTGGGCTCTCGTCTGGCGGCCGGCTGCGTGTGGGCGTACGACTCGTTTGCCACCAACATC ATGCCCGAGATATCCGAGGTAGAGGCCTGTCGACAACTGGACGGACCGTGCCGACTAGACGGAGACGATCATCAG ACCAAAGACGGCGGCCTTCCGACGGTGACGACGGGCGGACGCGAGAACCTACCGGCCGGGTTCGTACGGGTGAGG GACGCGCGGTACCTGCTCCGTCCCGAGGCCATCGAGAGCGTCTTCTACCTTTGGCGCATAACGGGAGATGGGACC TGGCGGGACGCGGCGTGGAGGATGTGGGAGGGTATCGTGAGGGAGACGGAGACGGAGCTTGCCTTTGCGTCGGTC GAGGATGTGAGGGTTAGGGGGAGTCCCAAGGCTGACTCTATGGAGGTGAGAGTTCCCTTGCCCCCCTTTTCTCTC TCCCAGTTGGTCTCTCCCGGTTGGGGGATAAAAGTCCAGTTCACTGACGGAGCTCTTCTCGCAGACGTTTTGGCT ATCGGAGACGACCAAGTACTTTTACCTCGTCTTTGAAGACGAGAGCGTCATCAGCCTCGACGACTGGGTCCTCAA TACCGAAGCTCACCCTCTCAAGCGGCCGCGGCCGGGATAG |