Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00683
Gene name
Locationscaffold_01:2607173..2608046
Strand+
Gene length (bp)873
Transcript length (bp)873
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

Domain # Start End Length
1 188 207 19
2 217 239 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00683
MAAPVVPRLHLFEIDDQPWFPSFLRAIVQNALTAAWSMVHPMTGKSAANLAASVLVRHLGNDLSSYTYVDFCAGS
GGPSPVIESSVNAHLAKRGSPPVDFLLTDLHPNTPAWEKLAMASPHVKFENASVDASQAPRHLTHQFNRKDVFRI
FNLAFHHFDDPLARRILKDTVSKSQGFAIFEMQDRSTSSIITVLLFGVAIFLAMPYYALKWRSPSALFFTYVVPV
IPFVLVFDGLISSVRTRTAFEVEALMRGCGVETGLWEVHHGSEPFLWPFGHMSWIVCRPVRRASL*
Coding >Ophcf2|00683
ATGGCTGCCCCCGTCGTTCCCCGTCTGCACCTCTTCGAGATCGACGACCAGCCATGGTTCCCCAGCTTCCTCCGA
GCCATCGTCCAGAACGCCCTCACGGCCGCCTGGAGCATGGTCCATCCCATGACCGGCAAGTCGGCGGCCAACCTC
GCGGCCTCGGTCCTGGTCCGACATCTGGGCAATGATCTCTCCTCCTACACCTATGTCGACTTCTGTGCCGGCTCC
GGAGGCCCTTCGCCCGTCATCGAGAGCTCCGTCAACGCCCATCTGGCCAAACGCGGCAGTCCGCCTGTCGACTTC
CTCCTGACCGATCTGCATCCCAATACGCCGGCTTGGGAGAAGCTGGCTATGGCGAGTCCCCATGTCAAGTTCGAG
AATGCCAGCGTCGACGCGAGTCAGGCACCTCGTCATCTCACCCACCAGTTCAATCGCAAGGATGTCTTCCGCATC
TTCAACCTGGCCTTTCATCATTTCGACGACCCCCTGGCCAGGAGGATCCTCAAGGATACCGTCTCCAAGAGTCAG
GGATTCGCCATATTCGAGATGCAGGACCGCAGCACATCGAGCATCATTACCGTCCTGCTCTTCGGCGTGGCCATC
TTCCTGGCCATGCCATACTACGCGCTCAAGTGGAGATCGCCCAGCGCACTCTTCTTCACCTACGTCGTGCCCGTC
ATCCCCTTCGTCCTCGTCTTCGACGGCCTGATATCCTCTGTTCGTACCCGGACCGCCTTCGAGGTCGAGGCTCTG
ATGAGGGGCTGCGGTGTCGAGACGGGCTTGTGGGAGGTTCACCACGGCAGCGAGCCGTTTCTGTGGCCGTTTGGG
CATATGAGCTGGATCGTCTGCAGGCCTGTAAGGCGGGCGAGTTTATGA
Transcript >Ophcf2|00683
ATGGCTGCCCCCGTCGTTCCCCGTCTGCACCTCTTCGAGATCGACGACCAGCCATGGTTCCCCAGCTTCCTCCGA
GCCATCGTCCAGAACGCCCTCACGGCCGCCTGGAGCATGGTCCATCCCATGACCGGCAAGTCGGCGGCCAACCTC
GCGGCCTCGGTCCTGGTCCGACATCTGGGCAATGATCTCTCCTCCTACACCTATGTCGACTTCTGTGCCGGCTCC
GGAGGCCCTTCGCCCGTCATCGAGAGCTCCGTCAACGCCCATCTGGCCAAACGCGGCAGTCCGCCTGTCGACTTC
CTCCTGACCGATCTGCATCCCAATACGCCGGCTTGGGAGAAGCTGGCTATGGCGAGTCCCCATGTCAAGTTCGAG
AATGCCAGCGTCGACGCGAGTCAGGCACCTCGTCATCTCACCCACCAGTTCAATCGCAAGGATGTCTTCCGCATC
TTCAACCTGGCCTTTCATCATTTCGACGACCCCCTGGCCAGGAGGATCCTCAAGGATACCGTCTCCAAGAGTCAG
GGATTCGCCATATTCGAGATGCAGGACCGCAGCACATCGAGCATCATTACCGTCCTGCTCTTCGGCGTGGCCATC
TTCCTGGCCATGCCATACTACGCGCTCAAGTGGAGATCGCCCAGCGCACTCTTCTTCACCTACGTCGTGCCCGTC
ATCCCCTTCGTCCTCGTCTTCGACGGCCTGATATCCTCTGTTCGTACCCGGACCGCCTTCGAGGTCGAGGCTCTG
ATGAGGGGCTGCGGTGTCGAGACGGGCTTGTGGGAGGTTCACCACGGCAGCGAGCCGTTTCTGTGGCCGTTTGGG
CATATGAGCTGGATCGTCTGCAGGCCTGTAAGGCGGGCGAGTTTATGA
Gene >Ophcf2|00683
ATGGCTGCCCCCGTCGTTCCCCGTCTGCACCTCTTCGAGATCGACGACCAGCCATGGTTCCCCAGCTTCCTCCGA
GCCATCGTCCAGAACGCCCTCACGGCCGCCTGGAGCATGGTCCATCCCATGACCGGCAAGTCGGCGGCCAACCTC
GCGGCCTCGGTCCTGGTCCGACATCTGGGCAATGATCTCTCCTCCTACACCTATGTCGACTTCTGTGCCGGCTCC
GGAGGCCCTTCGCCCGTCATCGAGAGCTCCGTCAACGCCCATCTGGCCAAACGCGGCAGTCCGCCTGTCGACTTC
CTCCTGACCGATCTGCATCCCAATACGCCGGCTTGGGAGAAGCTGGCTATGGCGAGTCCCCATGTCAAGTTCGAG
AATGCCAGCGTCGACGCGAGTCAGGCACCTCGTCATCTCACCCACCAGTTCAATCGCAAGGATGTCTTCCGCATC
TTCAACCTGGCCTTTCATCATTTCGACGACCCCCTGGCCAGGAGGATCCTCAAGGATACCGTCTCCAAGAGTCAG
GGATTCGCCATATTCGAGATGCAGGACCGCAGCACATCGAGCATCATTACCGTCCTGCTCTTCGGCGTGGCCATC
TTCCTGGCCATGCCATACTACGCGCTCAAGTGGAGATCGCCCAGCGCACTCTTCTTCACCTACGTCGTGCCCGTC
ATCCCCTTCGTCCTCGTCTTCGACGGCCTGATATCCTCTGTTCGTACCCGGACCGCCTTCGAGGTCGAGGCTCTG
ATGAGGGGCTGCGGTGTCGAGACGGGCTTGTGGGAGGTTCACCACGGCAGCGAGCCGTTTCTGTGGCCGTTTGGG
CATATGAGCTGGATCGTCTGCAGGCCTGTAAGGCGGGCGAGTTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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