© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|00663 |
| Gene name | |
| Location | scaffold_01:2561256..2563385 |
| Strand | + |
| Gene length (bp) | 2129 |
| Transcript length (bp) | 1833 |
| Coding sequence length (bp) | 1833 |
| Protein length (aa) | 611 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00854 | PTR2 | POT family | 1.4E-75 | 157 | 547 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 128 | 150 | 22 |
| 2 | 157 | 179 | 22 |
| 3 | 189 | 211 | 22 |
| 4 | 246 | 268 | 22 |
| 5 | 272 | 294 | 22 |
| 6 | 367 | 389 | 22 |
| 7 | 404 | 424 | 20 |
| 8 | 437 | 459 | 22 |
| 9 | 488 | 510 | 22 |
| 10 | 523 | 542 | 19 |
| 11 | 552 | 574 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Fungus | Fungus in pure culture | 16.75 | 8.11 | 25.39 |
| Alive | In ants, during behavior modification | 176.53 | 85.71 | 267.36 |
| Dead | In ants, recently dead | 207.24 | 95.92 | 318.55 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Alive | Fungus | 0.000238 | yes |
| Alive | Dead | 0.443181 | no |
| Dead | Fungus | 0.000238 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|00663 MASAVTIDHDAITPATAHLIDDKPAKDKETIVSQASMAGLASTHSAQDDYQGRPTDQEMSSLRRVSGKIMWSMWT IAFVELCERFSYYGTSVLYTNFINHPLPPGSRTGAPVHAGDLPGALGMGPKAAQGLTLFNMFFAYLMPLVGAWVA DARMGRFWTLHLAIGISTIAHVILVVAASPNVLANNKASFGVFIVGLLVLCVGTGFFKANVSPLLAEQNDDVRPR VEVRPDGERVIVDPAVTNTRIFLYFYFCINVGSLTGQIGMVYVEKYVGFWVAFLIPTALFLLAPFVLGSQKKSYK LKPPTGSLLSKFFRMFLYVRRRSGLTGFDWSVAKPSNVPVGQRPSWMTYDDAWVDEVRRGLKACKVFLFLPIFFL SYNQMTGNLTIQAGTMELHGVPNDIIQNLNPISILIIIPVFDHLLYPFLRKTGFAFTPIKRMTTGFIIAALSMVA SAVMQYYIYQKSPCGWYANKTVTIDGEERQCPPAPINVWAQCLPYIFIGIAEVLANVTSYEYAFSKAPENMKSLV MSVNLFMSAISAAIGQAFTPLSGDPLLVWNYTVVAVIAFIGGVAFWFCFSHLDSEEDKLNMLKKSDFIGQQKPGL AKAQEAGEDV* |
| Coding | >Ophcf2|00663 ATGGCGAGCGCCGTCACCATCGACCACGATGCCATCACACCCGCCACCGCCCACCTAATAGACGACAAACCGGCC AAAGACAAGGAAACGATCGTGTCCCAGGCGTCCATGGCGGGCCTGGCCTCGACGCACAGCGCCCAAGACGACTAC CAAGGCCGCCCGACCGACCAAGAGATGAGCTCCCTCCGTCGCGTCTCGGGCAAGATCATGTGGAGCATGTGGACG ATTGCCTTCGTCGAGCTGTGCGAGCGCTTCTCCTACTACGGCACTTCGGTTCTCTACACCAACTTCATCAACCAT CCGCTTCCGCCGGGGTCGCGGACGGGAGCCCCCGTCCATGCGGGGGATTTGCCCGGCGCGTTGGGGATGGGTCCC AAGGCGGCGCAGGGGCTGACGCTGTTTAACATGTTTTTCGCCTATCTGATGCCGCTGGTTGGAGCCTGGGTCGCC GACGCTCGAATGGGCCGCTTCTGGACCCTCCACCTCGCAATCGGCATCTCGACCATCGCCCACGTCATCCTCGTC GTCGCCGCCTCCCCCAACGTCCTGGCCAACAACAAGGCCTCCTTCGGCGTCTTCATCGTCGGACTGCTCGTCCTC TGCGTCGGAACCGGCTTCTTCAAAGCAAACGTCTCGCCCTTGCTGGCCGAGCAGAACGACGACGTCCGACCGCGG GTGGAAGTCCGTCCCGATGGCGAGCGCGTCATCGTCGACCCGGCCGTTACCAATACTCGCATCTTCCTCTACTTT TACTTCTGCATCAATGTCGGCTCCTTGACCGGCCAGATTGGCATGGTTTACGTCGAGAAATACGTCGGCTTCTGG GTCGCCTTCTTGATACCCACCGCCCTCTTCCTGCTGGCGCCCTTCGTCCTGGGCTCGCAGAAGAAGAGCTACAAG CTGAAGCCGCCGACGGGCTCGCTGCTGTCCAAGTTCTTCCGCATGTTCCTCTACGTCCGGCGCCGATCCGGACTC ACCGGCTTCGACTGGAGCGTCGCCAAGCCCTCCAACGTCCCCGTCGGTCAGAGACCCTCGTGGATGACCTACGAC GATGCCTGGGTAGACGAGGTTCGCCGCGGGCTCAAGGCCTGCAAGGTCTTCCTCTTCCTGCCCATCTTCTTCCTC TCCTACAACCAGATGACGGGCAATCTCACCATCCAGGCCGGAACCATGGAGTTGCACGGCGTGCCCAACGACATC ATACAGAACCTCAACCCCATCTCCATCCTCATCATCATCCCCGTCTTCGATCACCTCCTCTACCCCTTCCTGCGC AAGACGGGATTCGCCTTCACCCCGATCAAGCGCATGACGACGGGCTTCATCATCGCCGCCCTCTCCATGGTCGCC TCGGCCGTCATGCAGTACTATATATACCAAAAGAGCCCTTGCGGCTGGTACGCCAACAAGACCGTCACCATCGAT GGCGAGGAGAGGCAATGTCCACCGGCGCCCATCAACGTCTGGGCCCAGTGTCTGCCCTACATCTTCATCGGCATC GCCGAGGTCTTGGCCAACGTCACCTCGTACGAGTATGCCTTCTCCAAGGCGCCCGAGAACATGAAGTCTCTCGTC ATGAGCGTCAACCTCTTCATGAGCGCCATCTCCGCCGCCATCGGCCAGGCCTTTACCCCCTTATCTGGCGATCCC CTCCTGGTCTGGAACTACACCGTCGTGGCCGTCATTGCCTTCATCGGTGGCGTCGCCTTTTGGTTCTGCTTCAGT CACCTCGACTCTGAGGAGGACAAGCTCAATATGCTTAAAAAGTCCGACTTCATCGGCCAACAGAAACCTGGCCTG GCCAAGGCTCAGGAAGCGGGCGAAGACGTATGA |
| Transcript | >Ophcf2|00663 ATGGCGAGCGCCGTCACCATCGACCACGATGCCATCACACCCGCCACCGCCCACCTAATAGACGACAAACCGGCC AAAGACAAGGAAACGATCGTGTCCCAGGCGTCCATGGCGGGCCTGGCCTCGACGCACAGCGCCCAAGACGACTAC CAAGGCCGCCCGACCGACCAAGAGATGAGCTCCCTCCGTCGCGTCTCGGGCAAGATCATGTGGAGCATGTGGACG ATTGCCTTCGTCGAGCTGTGCGAGCGCTTCTCCTACTACGGCACTTCGGTTCTCTACACCAACTTCATCAACCAT CCGCTTCCGCCGGGGTCGCGGACGGGAGCCCCCGTCCATGCGGGGGATTTGCCCGGCGCGTTGGGGATGGGTCCC AAGGCGGCGCAGGGGCTGACGCTGTTTAACATGTTTTTCGCCTATCTGATGCCGCTGGTTGGAGCCTGGGTCGCC GACGCTCGAATGGGCCGCTTCTGGACCCTCCACCTCGCAATCGGCATCTCGACCATCGCCCACGTCATCCTCGTC GTCGCCGCCTCCCCCAACGTCCTGGCCAACAACAAGGCCTCCTTCGGCGTCTTCATCGTCGGACTGCTCGTCCTC TGCGTCGGAACCGGCTTCTTCAAAGCAAACGTCTCGCCCTTGCTGGCCGAGCAGAACGACGACGTCCGACCGCGG GTGGAAGTCCGTCCCGATGGCGAGCGCGTCATCGTCGACCCGGCCGTTACCAATACTCGCATCTTCCTCTACTTT TACTTCTGCATCAATGTCGGCTCCTTGACCGGCCAGATTGGCATGGTTTACGTCGAGAAATACGTCGGCTTCTGG GTCGCCTTCTTGATACCCACCGCCCTCTTCCTGCTGGCGCCCTTCGTCCTGGGCTCGCAGAAGAAGAGCTACAAG CTGAAGCCGCCGACGGGCTCGCTGCTGTCCAAGTTCTTCCGCATGTTCCTCTACGTCCGGCGCCGATCCGGACTC ACCGGCTTCGACTGGAGCGTCGCCAAGCCCTCCAACGTCCCCGTCGGTCAGAGACCCTCGTGGATGACCTACGAC GATGCCTGGGTAGACGAGGTTCGCCGCGGGCTCAAGGCCTGCAAGGTCTTCCTCTTCCTGCCCATCTTCTTCCTC TCCTACAACCAGATGACGGGCAATCTCACCATCCAGGCCGGAACCATGGAGTTGCACGGCGTGCCCAACGACATC ATACAGAACCTCAACCCCATCTCCATCCTCATCATCATCCCCGTCTTCGATCACCTCCTCTACCCCTTCCTGCGC AAGACGGGATTCGCCTTCACCCCGATCAAGCGCATGACGACGGGCTTCATCATCGCCGCCCTCTCCATGGTCGCC TCGGCCGTCATGCAGTACTATATATACCAAAAGAGCCCTTGCGGCTGGTACGCCAACAAGACCGTCACCATCGAT GGCGAGGAGAGGCAATGTCCACCGGCGCCCATCAACGTCTGGGCCCAGTGTCTGCCCTACATCTTCATCGGCATC GCCGAGGTCTTGGCCAACGTCACCTCGTACGAGTATGCCTTCTCCAAGGCGCCCGAGAACATGAAGTCTCTCGTC ATGAGCGTCAACCTCTTCATGAGCGCCATCTCCGCCGCCATCGGCCAGGCCTTTACCCCCTTATCTGGCGATCCC CTCCTGGTCTGGAACTACACCGTCGTGGCCGTCATTGCCTTCATCGGTGGCGTCGCCTTTTGGTTCTGCTTCAGT CACCTCGACTCTGAGGAGGACAAGCTCAATATGCTTAAAAAGTCCGACTTCATCGGCCAACAGAAACCTGGCCTG GCCAAGGCTCAGGAAGCGGGCGAAGACGTATGA |
| Gene | >Ophcf2|00663 ATGGCGAGCGCCGTCACCATCGACCACGATGCCATCACACCCGCCACCGCCCACCTAATAGACGACAAACCGGCC AAAGACAAGGAAACGATCGTGTCCCAGGCGTCCATGGCGGGCCTGGCCTCGACGCACAGCGCCCAAGACGACTAC CAAGGCCGCCCGACCGACCAAGAGATGAGCTCCCTCCGTCGCGTCTCGGGCAAGATCATGTGGAGCATGTGGACG ATTGCCTTCGTCGAGCTGTGCGAGCGCTTCTCCTACTACGGCACTTCGGTTCTCTACACCAACTTCATCAACCAT CCGCTTCCGCCGGGGTCGCGGACGGGAGCCCCCGTCCATGCGGGGGATTTGCCCGGCGCGTTGGGGATGGGTCCC AAGGCGGCGCAGGGGCTGACGCTGTTTAACATGTTTTTCGCCTATCTGATGCCGCTGGTTGGGTGAGTTTGCTTC AGGGTTGTTTTGTCGTTGTATGGAGATGGATGACTTGTTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG GCGTTGTTGGTGTTGTTGTCGCTGTTGTCGCTGTTGTCGTTGTTAGTGTTGTTGTCGCTGTTGTTGTTGTTGGTG TTGTTGTCGTTGGTGTTGTTGTCGTTGTCGTTGCTGTTGCTGTTGTCGCCGCCGCTGTTGCCATTGCCATTGCTC TCCCCCTTCTCAACCCCGTCAACAAACCACTCCCATCGCTAACCTCTTCTTCCCCCAGAGCCTGGGTCGCCGACG CTCGAATGGGCCGCTTCTGGACCCTCCACCTCGCAATCGGCATCTCGACCATCGCCCACGTCATCCTCGTCGTCG CCGCCTCCCCCAACGTCCTGGCCAACAACAAGGCCTCCTTCGGCGTCTTCATCGTCGGACTGCTCGTCCTCTGCG TCGGAACCGGCTTCTTCAAAGCAAACGTCTCGCCCTTGCTGGCCGAGCAGAACGACGACGTCCGACCGCGGGTGG AAGTCCGTCCCGATGGCGAGCGCGTCATCGTCGACCCGGCCGTTACCAATACTCGCATCTTCCTCTACTTTTACT TCTGCATCAATGTCGGCTCCTTGACCGGCCAGATTGGCATGGTTTACGTCGAGAAATACGTCGGCTTCTGGGTCG CCTTCTTGATACCCACCGCCCTCTTCCTGCTGGCGCCCTTCGTCCTGGGCTCGCAGAAGAAGAGCTACAAGCTGA AGCCGCCGACGGGCTCGCTGCTGTCCAAGTTCTTCCGCATGTTCCTCTACGTCCGGCGCCGATCCGGACTCACCG GCTTCGACTGGAGCGTCGCCAAGCCCTCCAACGTCCCCGTCGGTCAGAGACCCTCGTGGATGACCTACGACGATG CCTGGGTAGACGAGGTTCGCCGCGGGCTCAAGGCCTGCAAGGTCTTCCTCTTCCTGCCCATCTTCTTCCTCTCCT ACAACCAGATGACGGGCAATCTCACCATCCAGGCCGGAACCATGGAGTTGCACGGCGTGCCCAACGACATCATAC AGAACCTCAACCCCATCTCCATCCTCATCATCATCCCCGTCTTCGATCACCTCCTCTACCCCTTCCTGCGCAAGA CGGGATTCGCCTTCACCCCGATCAAGCGCATGACGACGGGCTTCATCATCGCCGCCCTCTCCATGGTCGCCTCGG CCGTCATGCAGTACTATATATACCAAAAGAGCCCTTGCGGCTGGTACGCCAACAAGACCGTCACCATCGATGGCG AGGAGAGGCAATGTCCACCGGCGCCCATCAACGTCTGGGCCCAGTGTCTGCCCTACATCTTCATCGGCATCGCCG AGGTCTTGGCCAACGTCACCTCGTACGAGTATGCCTTCTCCAAGGCGCCCGAGAACATGAAGTCTCTCGTCATGA GCGTCAACCTCTTCATGAGCGCCATCTCCGCCGCCATCGGCCAGGCCTTTACCCCCTTATCTGGCGATCCCCTCC TGGTCTGGAACTACACCGTCGTGGCCGTCATTGCCTTCATCGGTGGCGTCGCCTTTTGGTTCTGCTTCAGTCACC TCGACTCTGAGGAGGACAAGCTCAATATGCTTAAAAAGTCCGACTTCATCGGCCAACAGAAACCTGGCCTGGCCA AGGCTCAGGAAGCGGGCGAAGACGTATGA |