© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophcf2|00657 |
| Gene name | |
| Location | scaffold_01:2548276..2550842 |
| Strand | - |
| Gene length (bp) | 2566 |
| Transcript length (bp) | 2319 |
| Coding sequence length (bp) | 2319 |
| Protein length (aa) | 773 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00916 | Sulfate_transp | Sulfate permease family | 3.3E-109 | 76 | 464 |
| PF01740 | STAS | STAS domain | 2.0E-06 | 558 | 655 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015116 | sulfate transmembrane transporter activity | Yes |
| GO:0008272 | sulfate transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:1901682 | sulfur compound transmembrane transporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005215 | transporter activity | No |
| GO:0015698 | inorganic anion transport | No |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006820 | anion transport | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0072348 | sulfur compound transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0008150 | biological_process | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 73 | 92 | 19 |
| 2 | 105 | 124 | 19 |
| 3 | 154 | 176 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 240 | 257 | 17 |
| 6 | 270 | 292 | 22 |
| 7 | 365 | 387 | 22 |
| 8 | 403 | 425 | 22 |
| 9 | 430 | 452 | 22 |
| 10 | 459 | 491 | 32 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|00657 MSSSVKGRLAEAMGLAPVAREHRVPPLSNADSFVDRDPSVSEFLAELVPSNRDVARYLASLFPFVDWIYKYNVGW FIGDLIAGTTVGAVVVPQGMAYAQLAQLPVEYGLYSSFMGVVVYWAFATSKDITIGPVAVMSQVTGNVVLRARDS LPGVEGHVVASALAVVTGAIIVALGLARLGWLVELIPLPAICAFMTGSAVNIASGQVPKLMGIDGVNARDATYRV IIDTLRRLPTTRLDAAMGLTALAMLYVIRAWCSSMARRKPRLSKVFFFVSTLRTVFVILLYTGISAAVNVSRRDR PKFSIIKDVPRGFQHAAVPDVDPAIVRTLASELPAAVIVMLIEHISISKSFGRINNYVIDPSQELVAIGVSNLLG PFLGAYPATGSFSRTAIKSKAGVRTPFAGVITAMVVLLALYALTGVFYFIPNATLAAVIIHAVIDVVTPPAVVVQ FWRVSPLEAVIFVAGVLVTVFSSIEMGIYVTVGISFAVLIWRLFLSRGRMLGLVRIRTARAVPSVGGKTDDGEGQ AVAEESDQSLRTGFLPLGHEDGSNPSVVLQSPHPGIFIYSFAQGFNYPNASRSLGQLTETVFRETRRTDISSLGP LKDRPWNDTSPRTLKVDEADDRPTLKAIILDFSSVNNIDVTATQALMDVRNQLDAYAAPDRVDWHFAHIRSRWTK RSLAAAGFGFRTPRAEPQWKTIFSIADLVGAGGSAQAERFRLLATRDPEAEAEAEAEAEAEAGSGARLVAVQGLN RPLFHLDLQEAVEAALLNAEGE* |
| Coding | >Ophcf2|00657 ATGAGCTCTTCGGTCAAGGGTCGTCTGGCCGAGGCCATGGGCCTAGCGCCCGTCGCCCGTGAACACCGTGTGCCG CCGCTTTCCAATGCCGACAGCTTCGTCGACCGCGATCCCTCAGTATCCGAGTTTCTCGCCGAATTGGTCCCCTCG AACCGCGACGTCGCCCGCTACCTTGCTAGCCTATTTCCCTTTGTCGACTGGATCTACAAGTACAATGTGGGCTGG TTCATCGGTGACCTCATCGCCGGCACCACTGTGGGAGCCGTCGTCGTGCCTCAGGGCATGGCCTACGCACAGCTG GCCCAGCTCCCGGTCGAATACGGCCTGTACTCGTCTTTTATGGGCGTCGTCGTGTACTGGGCGTTTGCGACCTCC AAGGACATCACCATCGGCCCCGTCGCTGTCATGTCCCAGGTAACTGGCAACGTCGTCCTTCGCGCCAGAGACTCG CTGCCCGGTGTCGAGGGTCACGTCGTCGCCTCGGCCCTGGCCGTCGTCACGGGCGCCATCATTGTCGCTCTGGGC CTCGCCCGTCTCGGCTGGCTCGTCGAACTGATCCCGCTGCCGGCCATCTGCGCCTTCATGACGGGATCCGCCGTC AACATCGCCAGCGGCCAGGTACCCAAACTCATGGGCATCGATGGCGTCAACGCCCGCGACGCCACCTATCGCGTC ATCATCGACACCCTGCGGAGACTACCTACGACCCGACTCGACGCCGCCATGGGCCTGACGGCTCTCGCCATGCTC TATGTAATCCGCGCCTGGTGTTCCAGCATGGCCAGACGCAAGCCTCGCCTGTCCAAGGTCTTCTTCTTCGTCTCG ACGCTGCGCACCGTCTTCGTAATCCTGTTGTATACGGGCATCAGCGCCGCCGTCAACGTTTCGCGCAGGGACAGG CCCAAGTTTAGCATCATCAAGGACGTTCCGCGAGGCTTTCAGCACGCCGCTGTGCCCGACGTCGATCCCGCCATC GTGAGAACGCTGGCATCGGAACTCCCTGCGGCCGTCATCGTCATGCTCATTGAGCACATCTCCATCTCCAAGTCG TTTGGGCGCATCAATAACTACGTCATCGACCCTTCGCAGGAGCTGGTGGCCATTGGTGTCAGTAATCTCCTGGGG CCTTTTCTCGGCGCCTACCCGGCTACCGGGTCCTTTTCACGCACGGCCATCAAGTCCAAGGCCGGGGTGCGGACG CCCTTTGCCGGCGTCATCACGGCCATGGTGGTGCTACTCGCGCTGTATGCGCTGACGGGCGTCTTCTACTTTATC CCAAACGCCACTCTGGCAGCCGTCATCATACACGCCGTCATTGACGTGGTGACGCCGCCGGCCGTCGTGGTCCAG TTCTGGCGCGTATCGCCGCTCGAGGCCGTCATCTTCGTAGCCGGCGTGCTGGTGACGGTGTTTAGCAGCATCGAG ATGGGCATCTACGTGACGGTCGGCATCTCGTTTGCCGTCCTCATCTGGAGACTGTTTCTCAGCCGGGGCCGGATG CTGGGACTCGTGCGGATCCGCACCGCCAGGGCCGTGCCGAGTGTCGGCGGTAAGACGGACGACGGCGAGGGGCAG GCGGTGGCGGAAGAATCAGACCAGTCGCTACGCACCGGCTTCCTCCCGCTGGGCCACGAGGACGGGTCGAACCCG AGCGTGGTGTTGCAGAGCCCGCACCCGGGCATCTTCATCTACAGCTTCGCTCAGGGCTTCAACTACCCAAACGCG TCGCGTTCCCTGGGCCAGCTCACCGAGACGGTCTTCCGCGAGACGAGACGGACAGACATCAGCTCGCTTGGCCCG CTCAAGGACCGTCCGTGGAATGACACGTCGCCGCGGACGCTCAAAGTGGACGAGGCCGACGACCGACCGACGCTC AAGGCCATTATCCTCGACTTTTCTTCGGTAAATAACATTGACGTAACGGCGACACAGGCGCTCATGGATGTGCGA AACCAACTGGACGCGTATGCTGCGCCGGACCGGGTAGACTGGCACTTTGCCCACATCCGATCTCGCTGGACGAAG CGCAGCCTGGCGGCGGCGGGCTTCGGCTTCCGGACGCCACGAGCGGAGCCACAGTGGAAGACGATATTCAGCATC GCCGACCTCGTAGGAGCCGGCGGATCGGCGCAGGCGGAGCGCTTTCGGCTGCTGGCGACGCGGGACCCGGAAGCG GAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGGCAGCGGCGCACGGCTGGTGGCGGTGCAGGGGCTCAAC CGACCCCTGTTCCACCTGGACTTGCAAGAGGCGGTTGAGGCAGCGCTGCTGAATGCCGAGGGCGAGTGA |
| Transcript | >Ophcf2|00657 ATGAGCTCTTCGGTCAAGGGTCGTCTGGCCGAGGCCATGGGCCTAGCGCCCGTCGCCCGTGAACACCGTGTGCCG CCGCTTTCCAATGCCGACAGCTTCGTCGACCGCGATCCCTCAGTATCCGAGTTTCTCGCCGAATTGGTCCCCTCG AACCGCGACGTCGCCCGCTACCTTGCTAGCCTATTTCCCTTTGTCGACTGGATCTACAAGTACAATGTGGGCTGG TTCATCGGTGACCTCATCGCCGGCACCACTGTGGGAGCCGTCGTCGTGCCTCAGGGCATGGCCTACGCACAGCTG GCCCAGCTCCCGGTCGAATACGGCCTGTACTCGTCTTTTATGGGCGTCGTCGTGTACTGGGCGTTTGCGACCTCC AAGGACATCACCATCGGCCCCGTCGCTGTCATGTCCCAGGTAACTGGCAACGTCGTCCTTCGCGCCAGAGACTCG CTGCCCGGTGTCGAGGGTCACGTCGTCGCCTCGGCCCTGGCCGTCGTCACGGGCGCCATCATTGTCGCTCTGGGC CTCGCCCGTCTCGGCTGGCTCGTCGAACTGATCCCGCTGCCGGCCATCTGCGCCTTCATGACGGGATCCGCCGTC AACATCGCCAGCGGCCAGGTACCCAAACTCATGGGCATCGATGGCGTCAACGCCCGCGACGCCACCTATCGCGTC ATCATCGACACCCTGCGGAGACTACCTACGACCCGACTCGACGCCGCCATGGGCCTGACGGCTCTCGCCATGCTC TATGTAATCCGCGCCTGGTGTTCCAGCATGGCCAGACGCAAGCCTCGCCTGTCCAAGGTCTTCTTCTTCGTCTCG ACGCTGCGCACCGTCTTCGTAATCCTGTTGTATACGGGCATCAGCGCCGCCGTCAACGTTTCGCGCAGGGACAGG CCCAAGTTTAGCATCATCAAGGACGTTCCGCGAGGCTTTCAGCACGCCGCTGTGCCCGACGTCGATCCCGCCATC GTGAGAACGCTGGCATCGGAACTCCCTGCGGCCGTCATCGTCATGCTCATTGAGCACATCTCCATCTCCAAGTCG TTTGGGCGCATCAATAACTACGTCATCGACCCTTCGCAGGAGCTGGTGGCCATTGGTGTCAGTAATCTCCTGGGG CCTTTTCTCGGCGCCTACCCGGCTACCGGGTCCTTTTCACGCACGGCCATCAAGTCCAAGGCCGGGGTGCGGACG CCCTTTGCCGGCGTCATCACGGCCATGGTGGTGCTACTCGCGCTGTATGCGCTGACGGGCGTCTTCTACTTTATC CCAAACGCCACTCTGGCAGCCGTCATCATACACGCCGTCATTGACGTGGTGACGCCGCCGGCCGTCGTGGTCCAG TTCTGGCGCGTATCGCCGCTCGAGGCCGTCATCTTCGTAGCCGGCGTGCTGGTGACGGTGTTTAGCAGCATCGAG ATGGGCATCTACGTGACGGTCGGCATCTCGTTTGCCGTCCTCATCTGGAGACTGTTTCTCAGCCGGGGCCGGATG CTGGGACTCGTGCGGATCCGCACCGCCAGGGCCGTGCCGAGTGTCGGCGGTAAGACGGACGACGGCGAGGGGCAG GCGGTGGCGGAAGAATCAGACCAGTCGCTACGCACCGGCTTCCTCCCGCTGGGCCACGAGGACGGGTCGAACCCG AGCGTGGTGTTGCAGAGCCCGCACCCGGGCATCTTCATCTACAGCTTCGCTCAGGGCTTCAACTACCCAAACGCG TCGCGTTCCCTGGGCCAGCTCACCGAGACGGTCTTCCGCGAGACGAGACGGACAGACATCAGCTCGCTTGGCCCG CTCAAGGACCGTCCGTGGAATGACACGTCGCCGCGGACGCTCAAAGTGGACGAGGCCGACGACCGACCGACGCTC AAGGCCATTATCCTCGACTTTTCTTCGGTAAATAACATTGACGTAACGGCGACACAGGCGCTCATGGATGTGCGA AACCAACTGGACGCGTATGCTGCGCCGGACCGGGTAGACTGGCACTTTGCCCACATCCGATCTCGCTGGACGAAG CGCAGCCTGGCGGCGGCGGGCTTCGGCTTCCGGACGCCACGAGCGGAGCCACAGTGGAAGACGATATTCAGCATC GCCGACCTCGTAGGAGCCGGCGGATCGGCGCAGGCGGAGCGCTTTCGGCTGCTGGCGACGCGGGACCCGGAAGCG GAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGGCAGCGGCGCACGGCTGGTGGCGGTGCAGGGGCTCAAC CGACCCCTGTTCCACCTGGACTTGCAAGAGGCGGTTGAGGCAGCGCTGCTGAATGCCGAGGGCGAGTGA |
| Gene | >Ophcf2|00657 ATGAGCTCTTCGGTCAAGGGTCGTCTGGCCGAGGCCATGGGCCTAGCGCCCGTCGCCCGTGAACACCGTGTGCCG CCGCTTTCCAATGCCGACAGCTTCGTCGACCGCGATCCCTCAGTATCCGAGTTTCTCGCCGAATTGGTCCCCTCG AACCGCGACGTCGCCCGCTACCTTGCTAGCCTATTTCCCTTTGTCGACTGGATCTACAAGTACAATGTGGGCTGG TTCATCGGTGACCTCATCGCCGGTCAGTCTGTCCCGGCTTTGACTTTTGTCCGCCGCTGACGACATGTTCTACCT ACATAGGCACCACTGTGGGAGCCGTCGTCGTGCCTCAGGGCATGGCCTACGCACAGCTGGCCCAGCTCCCGGTCG AATACGGCCTGTACTCGTCTTTTATGGGCGTCGTCGTGTACTGGGCGTTTGCGACCTCCAAGGACATCACCATCG GCGTCGGCATCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTTCTCTTCCCCTGTCGTTGCTGACCTGCCGGTGTC GCAGCCCGTCGCTGTCATGTCCCAGGTAACTGGCAACGTCGTCCTTCGCGCCAGAGACTCGCTGCCCGGTGTCGA GGGTCACGTCGTCGCCTCGGCCCTGGCCGTCGTCACGGGCGCCATCATTGTCGCTCTGGGCCTCGCCCGTCTCGG CTGGCTCGTCGAACTGATCCCGCTGCCGGCCATCTGCGCCTTCATGACGGGATCCGCCGTCAACATCGCCAGCGG CCAGGTACCCAAACTCATGGGCATCGATGGCGTCAACGCCCGCGACGCCACCTATCGCGTCATCATCGACACCCT GCGGAGACTACCTACGACCCGACTCGACGCCGCCATGGGCCTGACGGCTCTCGCCATGCTCTATGTAATCCGCGC CTGGTGTTCCAGCATGGCCAGACGCAAGCCTCGCCTGTCCAAGGTCTTCTTCTTCGTCTCGACGCTGCGCACCGT CTTCGTAATCCTGTTGTATACGGGCATCAGCGCCGCCGTCAACGTTTCGCGCAGGGACAGGCCCAAGTTTAGCAT CATCAAGGACGTTCCGCGAGGTGAGCAATTGATACGTATGTCAACCGGCTGACACGGTCTCATCGTCTTGTCAGG CTTTCAGCACGCCGCTGTGCCCGACGTCGATCCCGCCATCGTGAGAACGCTGGCATCGGAACTCCCTGCGGCCGT CATCGTCATGCTCATTGAGCACATCTCCATCTCCAAGTCGTTTGGGCGCATCAATAACTACGTCATCGACCCTTC GCAGGAGCTGGTGGCCATTGGTGTCAGTAATCTCCTGGGGCCTTTTCTCGGCGCCTACCCGGCTACCGGGTCCTT TTCACGCACGGCCATCAAGTCCAAGGCCGGGGTGCGGACGCCCTTTGCCGGCGTCATCACGGCCATGGTGGTGCT ACTCGCGCTGTATGCGCTGACGGGCGTCTTCTACTTTATCCCAAACGCCACTCTGGCAGCCGTCATCATACACGC CGTCATTGACGTGGTGACGCCGCCGGCCGTCGTGGTCCAGTTCTGGCGCGTATCGCCGCTCGAGGCCGTCATCTT CGTAGCCGGCGTGCTGGTGACGGTGTTTAGCAGCATCGAGATGGGCATCTACGTGACGGTCGGCATCTCGTTTGC CGTCCTCATCTGGAGACTGTTTCTCAGCCGGGGCCGGATGCTGGGACTCGTGCGGATCCGCACCGCCAGGGCCGT GCCGAGTGTCGGCGGTAAGACGGACGACGGCGAGGGGCAGGCGGTGGCGGAAGAATCAGACCAGTCGCTACGCAC CGGCTTCCTCCCGCTGGGCCACGAGGACGGGTCGAACCCGAGCGTGGTGTTGCAGAGCCCGCACCCGGGCATCTT CATCTACAGCTTCGCTCAGGGCTTCAACTACCCAAACGCGTCGCGTTCCCTGGGCCAGCTCACCGAGACGGTCTT CCGCGAGACGAGACGGACAGACATCAGCTCGCTTGGCCCGCTCAAGGTGCGTCAAGGGTCCGGTGCAGGTCGACT GGCGACGTAGAGCGTTGACATGGTGCAGGACCGTCCGTGGAATGACACGTCGCCGCGGACGCTCAAAGTGGACGA GGCCGACGACCGACCGACGCTCAAGGCCATTATCCTCGACTTTTCTTCGGTAAATAACATTGACGTAACGGCGAC ACAGGCGCTCATGGATGTGCGAAACCAACTGGACGCGTATGCTGCGCCGGACCGGGTAGACTGGCACTTTGCCCA CATCCGATCTCGCTGGACGAAGCGCAGCCTGGCGGCGGCGGGCTTCGGCTTCCGGACGCCACGAGCGGAGCCACA GTGGAAGACGATATTCAGCATCGCCGACCTCGTAGGAGCCGGCGGATCGGCGCAGGCGGAGCGCTTTCGGCTGCT GGCGACGCGGGACCCGGAAGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGGCAGCGGCGCACGGCT GGTGGCGGTGCAGGGGCTCAACCGACCCCTGTTCCACCTGGACTTGCAAGAGGCGGTTGAGGCAGCGCTGCTGAA TGCCGAGGGCGAGTGA |