Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00600
Gene name
Locationscaffold_01:2350692..2352586
Strand+
Gene length (bp)1894
Transcript length (bp)1644
Coding sequence length (bp)1644
Protein length (aa) 548

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00487 FA_desaturase Fatty acid desaturase 1.8E-30 233 506
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 1.1E-07 18 77

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

Domain # Start End Length
1 223 245 22
2 260 282 22
3 343 365 22
4 378 400 22
5 407 426 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00600
MDRGKILSQAAVDALIADGQTIVIFQDHVLRLDSWLPRHPGGSLAILHMIGRDATDEITAYHAASTLRTMSAFRI
GRKPPGLWTNRTPPIRQGPLQAIEPALSDDSLLDDDTNSTSSTAPTSPPTSSYGDDKLDEHQLRRRKGRDVTTVL
DNPASIIDSAVQSRIERDIRDYPSLDPAVQQDIVAKYRLMHQQVIDEDLYSCPYREYAKDLVRFLILFSVFMGAL
RYGWYLTSSFFLGLFWHQIMFTAHDAGHRAITHNFVVDTLIGMFIADFCCGLSIGWWKSSHNVHHLVTNQPEHDP
DIQNVPLFAICPSFFKSITSTYYPNFVIVWDAAADFLVPYQKYTYYPVLAVARFNLYILSWLHVLSSKSSSLAGS
KAWWIRPGEISFMCCYWFLFGYCLLWRSLPSWTVRVVYTLVAHIVTMPLHIQINLSHWGMSTSDLGESESFAQRQ
LRATMDVDCPPWLDFYHGGLQFQVVHHLFPRMPRHNLRKAQAFVKEFCRSTGIPYTILSFTDGNRRVLGRLQEVT
DQLAVLAKCQKSLAESGTYDLH*
Coding >Ophcf2|00600
ATGGATCGCGGCAAGATCCTCTCTCAGGCCGCCGTCGACGCCCTCATCGCAGACGGCCAGACAATCGTCATCTTC
CAAGACCACGTCTTGCGCCTCGACTCCTGGCTCCCCCGCCACCCCGGAGGCTCCCTCGCCATTTTACACATGATT
GGTCGAGATGCCACGGACGAGATTACAGCATACCACGCTGCCTCGACCTTGCGTACCATGTCCGCCTTTCGCATC
GGCCGGAAGCCACCCGGCCTCTGGACCAACAGGACGCCGCCCATCAGACAGGGCCCGCTGCAAGCCATCGAGCCC
GCCCTCTCGGACGACTCCCTCCTCGACGACGATACCAACAGCACCTCGTCCACGGCGCCAACCTCCCCGCCCACC
AGCTCCTATGGCGACGATAAGCTCGACGAACACCAGCTTAGGAGACGAAAGGGCAGGGACGTCACCACCGTCTTG
GATAACCCTGCCAGCATCATCGACTCGGCTGTCCAGTCCCGCATCGAACGCGATATCCGCGACTACCCATCGCTC
GACCCCGCTGTGCAGCAGGATATCGTGGCCAAGTATCGTCTGATGCACCAACAGGTCATCGACGAGGACCTTTAC
AGTTGCCCGTACCGCGAGTATGCAAAGGACCTCGTTCGCTTCCTGATTCTGTTCAGCGTCTTCATGGGTGCTCTC
CGCTATGGGTGGTACCTGACGTCGTCCTTTTTCCTGGGGCTCTTTTGGCACCAAATCATGTTCACCGCCCATGAC
GCCGGCCACCGAGCCATCACCCATAACTTCGTCGTCGATACCCTCATTGGCATGTTCATTGCCGATTTTTGCTGC
GGCCTGTCCATCGGTTGGTGGAAGAGCAGCCACAATGTCCATCACCTCGTCACCAATCAACCTGAGCACGACCCG
GACATCCAGAATGTCCCCCTTTTCGCCATATGCCCGTCCTTCTTCAAGTCGATAACCTCGACGTACTACCCCAAC
TTCGTCATTGTTTGGGACGCCGCGGCCGACTTCCTGGTGCCCTATCAAAAGTACACTTACTATCCGGTCCTGGCT
GTTGCCCGCTTCAATCTCTACATATTGTCGTGGCTGCACGTCCTCTCGTCCAAGTCGTCGTCGCTGGCAGGGTCC
AAAGCCTGGTGGATTCGTCCCGGTGAGATCAGCTTCATGTGTTGCTACTGGTTCCTCTTTGGCTATTGCCTGCTT
TGGCGCTCGCTGCCGAGTTGGACGGTACGCGTGGTCTATACGCTCGTGGCCCACATCGTCACAATGCCCCTGCAC
ATCCAGATCAACTTGTCTCACTGGGGCATGTCGACGTCTGACTTGGGCGAGTCCGAGTCCTTTGCCCAGCGACAA
CTACGGGCCACGATGGACGTCGACTGCCCACCCTGGCTCGACTTTTACCACGGAGGACTTCAGTTCCAGGTGGTT
CACCACCTGTTCCCTCGCATGCCGCGGCACAATCTCCGCAAGGCGCAGGCCTTTGTCAAGGAGTTTTGCCGCTCG
ACGGGCATCCCCTACACCATCCTGAGCTTCACGGATGGGAATCGCAGGGTGCTCGGCCGGCTGCAGGAGGTGACG
GACCAGCTGGCCGTGCTGGCCAAGTGTCAAAAGTCGCTGGCTGAGAGCGGCACGTACGACCTGCACTGA
Transcript >Ophcf2|00600
ATGGATCGCGGCAAGATCCTCTCTCAGGCCGCCGTCGACGCCCTCATCGCAGACGGCCAGACAATCGTCATCTTC
CAAGACCACGTCTTGCGCCTCGACTCCTGGCTCCCCCGCCACCCCGGAGGCTCCCTCGCCATTTTACACATGATT
GGTCGAGATGCCACGGACGAGATTACAGCATACCACGCTGCCTCGACCTTGCGTACCATGTCCGCCTTTCGCATC
GGCCGGAAGCCACCCGGCCTCTGGACCAACAGGACGCCGCCCATCAGACAGGGCCCGCTGCAAGCCATCGAGCCC
GCCCTCTCGGACGACTCCCTCCTCGACGACGATACCAACAGCACCTCGTCCACGGCGCCAACCTCCCCGCCCACC
AGCTCCTATGGCGACGATAAGCTCGACGAACACCAGCTTAGGAGACGAAAGGGCAGGGACGTCACCACCGTCTTG
GATAACCCTGCCAGCATCATCGACTCGGCTGTCCAGTCCCGCATCGAACGCGATATCCGCGACTACCCATCGCTC
GACCCCGCTGTGCAGCAGGATATCGTGGCCAAGTATCGTCTGATGCACCAACAGGTCATCGACGAGGACCTTTAC
AGTTGCCCGTACCGCGAGTATGCAAAGGACCTCGTTCGCTTCCTGATTCTGTTCAGCGTCTTCATGGGTGCTCTC
CGCTATGGGTGGTACCTGACGTCGTCCTTTTTCCTGGGGCTCTTTTGGCACCAAATCATGTTCACCGCCCATGAC
GCCGGCCACCGAGCCATCACCCATAACTTCGTCGTCGATACCCTCATTGGCATGTTCATTGCCGATTTTTGCTGC
GGCCTGTCCATCGGTTGGTGGAAGAGCAGCCACAATGTCCATCACCTCGTCACCAATCAACCTGAGCACGACCCG
GACATCCAGAATGTCCCCCTTTTCGCCATATGCCCGTCCTTCTTCAAGTCGATAACCTCGACGTACTACCCCAAC
TTCGTCATTGTTTGGGACGCCGCGGCCGACTTCCTGGTGCCCTATCAAAAGTACACTTACTATCCGGTCCTGGCT
GTTGCCCGCTTCAATCTCTACATATTGTCGTGGCTGCACGTCCTCTCGTCCAAGTCGTCGTCGCTGGCAGGGTCC
AAAGCCTGGTGGATTCGTCCCGGTGAGATCAGCTTCATGTGTTGCTACTGGTTCCTCTTTGGCTATTGCCTGCTT
TGGCGCTCGCTGCCGAGTTGGACGGTACGCGTGGTCTATACGCTCGTGGCCCACATCGTCACAATGCCCCTGCAC
ATCCAGATCAACTTGTCTCACTGGGGCATGTCGACGTCTGACTTGGGCGAGTCCGAGTCCTTTGCCCAGCGACAA
CTACGGGCCACGATGGACGTCGACTGCCCACCCTGGCTCGACTTTTACCACGGAGGACTTCAGTTCCAGGTGGTT
CACCACCTGTTCCCTCGCATGCCGCGGCACAATCTCCGCAAGGCGCAGGCCTTTGTCAAGGAGTTTTGCCGCTCG
ACGGGCATCCCCTACACCATCCTGAGCTTCACGGATGGGAATCGCAGGGTGCTCGGCCGGCTGCAGGAGGTGACG
GACCAGCTGGCCGTGCTGGCCAAGTGTCAAAAGTCGCTGGCTGAGAGCGGCACGTACGACCTGCACTGA
Gene >Ophcf2|00600
ATGGATCGCGGCAAGATCCTCTCTCAGGCCGCCGTCGACGCCCTCATCGCAGACGGCCAGACAATCGTCATCTTC
CAAGACCACGTCTTGCGCCTCGACTCCTGGCTCCCCCGCCACCCCGGAGGCTCCCTCGCCATTTTACACATGATT
GGTCGAGATGCCACGGACGAGATTACAGCGTAAATGGCCCGCTCCAAGCACAAAAAGGAAAAAATAAGAAGCGAA
GGACCCTTCTTTGGGAGCGGTCCGGTCCGTGCTAGGCCCAATGGGCTCAGACCATGATGAAACATGCCTTGGGCT
AACATTTTGGGCACTTGCAGATACCACGCTGCCTCGACCTTGCGTACCATGTCCGCCTTTCGCATCGGCCGGAAG
CCACCCGGCCTCTGGACCAACAGGACGCCGCCCATCAGACAGGGCCCGCTGCAAGCCATCGAGCCCGCCCTCTCG
GACGACTCCCTCCTCGACGACGATACCAACAGCACCTCGTCCACGGCGCCAACCTCCCCGCCCACCAGCTCCTAT
GGCGACGATAAGCTCGACGAACACCAGCTTAGGAGACGAAAGGGCAGGGACGTCACCACCGTCTTGGATAACCCT
GCCAGCATCATCGACTCGGCTGTCCAGTCCCGCATCGAACGCGATATCCGCGACTACCCATCGCTCGACCCCGCT
GTGCAGCAGGATATCGTGGCCAAGTATCGTCTGATGCACCAACAGGTCATCGACGAGGACCTTTACAGTTGCCCG
TACCGCGAGTATGCAAAGGACCTCGTTCGCTTCCTGATTCTGTTCAGCGTCTTCATGGGTGCTCTCCGCTATGGG
TGGTACCTGACGTCGTCCTTTTTCCTGGGGCTCTTTTGGGTACGTCGCCCTTCTACTAATGGACGAGACTGCGCT
CATTCTCGTCGGTGCAGCACCAAATCATGTTCACCGCCCATGACGCCGGCCACCGAGCCATCACCCATAACTTCG
TCGTCGATACCCTCATTGGCATGTTCATTGCCGATTTTTGCTGCGGCCTGTCCATCGGTTGGTGGAAGAGCAGCC
ACAATGTCCATCACCTCGTCACCAATCAACCTGTCGGTCCTTGCCCTTGTCTCTGGATGCTACTGCTGCTGATAC
GGTCGTGTTGCAGGAGCACGACCCGGACATCCAGAATGTCCCCCTTTTCGCCATATGCCCGTCCTTCTTCAAGTC
GATAACCTCGACGTACTACCCCAACTTCGTCATTGTTTGGGACGCCGCGGCCGACTTCCTGGTGCCCTATCAAAA
GTACACTTACTATCCGGTCCTGGCTGTTGCCCGCTTCAATCTCTACATATTGTCGTGGCTGCACGTCCTCTCGTC
CAAGTCGTCGTCGCTGGCAGGGTCCAAAGCCTGGTGGATTCGTCCCGGTGAGATCAGCTTCATGTGTTGCTACTG
GTTCCTCTTTGGCTATTGCCTGCTTTGGCGCTCGCTGCCGAGTTGGACGGTACGCGTGGTCTATACGCTCGTGGC
CCACATCGTCACAATGCCCCTGCACATCCAGATCAACTTGTCTCACTGGGGCATGTCGACGTCTGACTTGGGCGA
GTCCGAGTCCTTTGCCCAGCGACAACTACGGGCCACGATGGACGTCGACTGCCCACCCTGGCTCGACTTTTACCA
CGGAGGACTTCAGTTCCAGGTGGTTCACCACCTGTTCCCTCGCATGCCGCGGCACAATCTCCGCAAGGCGCAGGC
CTTTGTCAAGGAGTTTTGCCGCTCGACGGGCATCCCCTACACCATCCTGAGCTTCACGGATGGGAATCGCAGGGT
GCTCGGCCGGCTGCAGGAGGTGACGGACCAGCTGGCCGTGCTGGCCAAGTGTCAAAAGTCGCTGGCTGAGAGCGG
CACGTACGACCTGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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