Protein ID | Ophcf2|00581 |
Gene name | |
Location | scaffold_01:2292096..2293685 |
Strand | - |
Gene length (bp) | 1589 |
Transcript length (bp) | 1269 |
Coding sequence length (bp) | 1269 |
Protein length (aa) | 423 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 3.0E-12 | 122 | 344 |
PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 5.8E-09 | 120 | 340 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 121.78 | 68.93 | 174.62 |
Alive | In ants, during behavior modification | 76.36 | 43.74 | 108.98 |
Dead | In ants, recently dead | 78.17 | 44.78 | 111.56 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.010394 | yes |
Alive | Dead | 0.907011 | no |
Dead | Fungus | 0.016062 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00581 MEWFGKAQLAFTHAPTPVTIKLRDGSDTDLVKICEKATPPCQLNPLLFNGHLQTLWSASKPHGPKVYYRRKTFEA DDTSYRGSFAVDFAVEPFEGNDPGLPWRTRHFTPDELSHMGSNDAKPMLVILHGLSGGSHEVYLRHAIAPLLQEG GWEACVVNSRGCAHSKITSGLLYNARSTWDLRQTVKWLRKTYPNRPLFGLGFSLGASMLTTYCGEEGSDCLLKAA IACSNPFKLDISCRYLLDSLIGREVYLRSMASSLKVLVEEHKKELQLYSDLDMEAIDKITYLPEFDRTVQCPTWG YPTEQAYYRDASSSDAVLAIRIPFMALHATDDPIAVRQAIPYEEFQQNPSTVLVTSSLGGHLCWFESGGTRWFPR PICNFFNRMAFDVDLDYLKPREGSTSHTSTAKTTFEPMRRKLNPVDM* |
Coding | >Ophcf2|00581 ATGGAGTGGTTTGGTAAGGCTCAGCTAGCTTTTACTCACGCTCCAACGCCCGTGACAATCAAGCTCAGGGACGGG TCGGATACCGACCTGGTCAAGATTTGCGAAAAGGCAACGCCCCCGTGCCAGCTAAACCCGCTTCTGTTCAACGGT CACCTTCAGACATTATGGTCGGCCAGCAAACCTCATGGCCCCAAGGTCTATTATCGACGCAAGACTTTCGAGGCT GATGATACGTCATACCGAGGTTCTTTCGCCGTCGACTTCGCCGTCGAGCCCTTCGAAGGCAATGATCCCGGTCTG CCGTGGAGAACGCGCCACTTCACCCCAGACGAATTGAGCCACATGGGCTCCAACGATGCCAAGCCCATGCTCGTC ATTCTCCACGGCCTGTCGGGTGGATCACACGAAGTCTATCTTAGACACGCCATCGCTCCTTTGCTGCAAGAGGGT GGCTGGGAGGCTTGCGTTGTCAACTCGCGAGGCTGCGCGCACAGTAAAATCACCAGCGGCCTGCTGTATAATGCT CGGAGCACTTGGGACCTGCGACAGACGGTGAAATGGTTGCGCAAGACCTATCCCAACCGGCCTCTCTTTGGCCTC GGATTCTCTCTTGGCGCCAGCATGCTCACCACTTACTGCGGTGAAGAAGGCTCCGACTGTTTGCTCAAGGCCGCC ATTGCCTGCTCGAACCCATTCAAGTTGGACATTTCCTGCAGGTATCTGCTAGACAGCCTCATCGGCAGAGAGGTC TATCTCCGCTCCATGGCCAGCTCGTTGAAAGTTCTGGTAGAGGAACACAAGAAAGAGCTGCAGCTGTACAGCGAT CTTGACATGGAGGCCATCGACAAGATCACCTACCTCCCCGAGTTCGATCGAACAGTTCAGTGCCCAACTTGGGGC TATCCCACAGAGCAGGCCTATTACCGCGACGCCTCGTCGTCAGACGCCGTGCTGGCCATCAGGATTCCTTTCATG GCACTTCACGCTACCGACGATCCTATTGCTGTGCGCCAGGCGATTCCGTACGAGGAGTTCCAGCAGAATCCGAGT ACGGTTCTGGTCACGTCCTCGCTAGGAGGTCATCTCTGCTGGTTCGAATCGGGCGGGACCAGGTGGTTCCCTCGG CCGATATGCAACTTCTTCAACCGCATGGCCTTTGACGTCGACCTGGATTACCTCAAGCCGCGGGAGGGCTCGACT TCTCATACATCGACGGCCAAGACAACCTTTGAGCCGATGCGCCGGAAATTAAACCCCGTCGACATGTAG |
Transcript | >Ophcf2|00581 ATGGAGTGGTTTGGTAAGGCTCAGCTAGCTTTTACTCACGCTCCAACGCCCGTGACAATCAAGCTCAGGGACGGG TCGGATACCGACCTGGTCAAGATTTGCGAAAAGGCAACGCCCCCGTGCCAGCTAAACCCGCTTCTGTTCAACGGT CACCTTCAGACATTATGGTCGGCCAGCAAACCTCATGGCCCCAAGGTCTATTATCGACGCAAGACTTTCGAGGCT GATGATACGTCATACCGAGGTTCTTTCGCCGTCGACTTCGCCGTCGAGCCCTTCGAAGGCAATGATCCCGGTCTG CCGTGGAGAACGCGCCACTTCACCCCAGACGAATTGAGCCACATGGGCTCCAACGATGCCAAGCCCATGCTCGTC ATTCTCCACGGCCTGTCGGGTGGATCACACGAAGTCTATCTTAGACACGCCATCGCTCCTTTGCTGCAAGAGGGT GGCTGGGAGGCTTGCGTTGTCAACTCGCGAGGCTGCGCGCACAGTAAAATCACCAGCGGCCTGCTGTATAATGCT CGGAGCACTTGGGACCTGCGACAGACGGTGAAATGGTTGCGCAAGACCTATCCCAACCGGCCTCTCTTTGGCCTC GGATTCTCTCTTGGCGCCAGCATGCTCACCACTTACTGCGGTGAAGAAGGCTCCGACTGTTTGCTCAAGGCCGCC ATTGCCTGCTCGAACCCATTCAAGTTGGACATTTCCTGCAGGTATCTGCTAGACAGCCTCATCGGCAGAGAGGTC TATCTCCGCTCCATGGCCAGCTCGTTGAAAGTTCTGGTAGAGGAACACAAGAAAGAGCTGCAGCTGTACAGCGAT CTTGACATGGAGGCCATCGACAAGATCACCTACCTCCCCGAGTTCGATCGAACAGTTCAGTGCCCAACTTGGGGC TATCCCACAGAGCAGGCCTATTACCGCGACGCCTCGTCGTCAGACGCCGTGCTGGCCATCAGGATTCCTTTCATG GCACTTCACGCTACCGACGATCCTATTGCTGTGCGCCAGGCGATTCCGTACGAGGAGTTCCAGCAGAATCCGAGT ACGGTTCTGGTCACGTCCTCGCTAGGAGGTCATCTCTGCTGGTTCGAATCGGGCGGGACCAGGTGGTTCCCTCGG CCGATATGCAACTTCTTCAACCGCATGGCCTTTGACGTCGACCTGGATTACCTCAAGCCGCGGGAGGGCTCGACT TCTCATACATCGACGGCCAAGACAACCTTTGAGCCGATGCGCCGGAAATTAAACCCCGTCGACATGTAG |
Gene | >Ophcf2|00581 ATGGAGTGGTTTGGTAAGGCTCAGCTAGCTTTTACTCACGCTCCAACGCCCGTGACAATCAAGCTCAGGGACGGG TCGGATACCGACCTGGTCAAGATTTGCGAAAAGGCAACGCCCCCGTGCCAGCTAAACCCGCTTCTGTTCAACGGT CACCTTCAGACATTATGGTCGGCCAGCAAACCTCATGGCCCCAAGGTCTATTATCGACGCAAGACTTTCGAGGCT GATGATACGTCATACCGAGGTTCTTTCGCCGTCGACTTCGCCGTCGAGCCCTTCGAAGGCAATGATCCCGGTCTG CCGTGGAGAACGCGCCACTTCACCCCAGACGAATTGAGCCACATGGGCTCCAACGATGCCAAGCCCATGCTCGTC ATTCTCCACGGCCTGTCGGGTGGATCACACGAAGTCTATCTTAGACACGCCATCGCTCCTTTGCTGCAAGAGGGT GGCTGGGAGGCTTGCGTTGTCAACTCGCGAGGCTGCGCGCACAGTAAAATCACCAGCGGCCTGCTGTATAATGCT CGGAGCACTTGGGACCTGCGACAGGTTTGTGGACGTCTGATTACTGCGTCTCGGCCACGCTGATGGCATCAGACG GTGAAATGGTTGCGCAAGACCTATCCCAACCGGCCTCTCTTTGGCCTCGGATTCTCTCTTGGCGCCAGCATGCTC ACCACTGTAAGTATATCATGGTCTGTTATCCTGTGAGCCGGCCTAGACAGTAACGTGTGGCAACAGTACTGCGGT GAAGAAGGCTCCGACTGTTTGCTCAAGGCCGCCATTGCCTGCTCGAACCCATTCAAGTTGGACATTTCCTGCAGG TATCTGCTAGACAGCCTCATCGGCAGAGAGGTCTATCTCCGCTCCATGGCCAGTGAGTCTGTACCAGCCGGCCGC ACGTCTTCGGAGCTGACCACGAGCTCAGGCTCGTTGAAAGTTCTGGTAGAGGAACACAAGAAAGAGCTGCAGCTG TACAGCGATCTTGACATGGAGGCCATCGACAAGATCACCTACCTCCCCGAGTTCGATCGAACAGTTCAGTGCGTT ATGCCGCAACGCCCATGTACCTACCACTTTCTTTTCTCACCGACTTCGCAGGTGCCCAACTTGGGGCTATCCCAC AGAGCAGGCCTATTACCGCGACGCCTCGTCGTCAGACGCCGTGCTGGCCATCAGGATTCCTTTCATGGCACTTCA CGCTACCGACGATCCTGTAAGAAAGCTGGGTCTGACGCCATATAGAATGCATGGCCTAACGTATAAGCAGATTGC TGTGCGCCAGGCGATTCCGTACGAGGAGTTCCAGCAGAATCCGAGTACGGTTCTGGTCACGTCCTCGCTAGGAGG TCATCTCTGCTGGTTCGAATCGGGCGGGACCAGGTGGTTCCCTCGGCCGGTACGATGATCCGACATTGACTGCCT TCAGCCGGCTGACTCTGGTCCAGATATGCAACTTCTTCAACCGCATGGCCTTTGACGTCGACCTGGATTACCTCA AGCCGCGGGAGGGCTCGACTTCTCATACATCGACGGCCAAGACAACCTTTGAGCCGATGCGCCGGAAATTAAACC CCGTCGACATGTAG |