Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00553
Gene name
Locationscaffold_01:2210585..2211539
Strand-
Gene length (bp)954
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 9.8E-13 58 131

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 206 228 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00553
MKTSTIALAALTATSQAYAAREAPNPVDRDLRATLVERQAAPAQKQSQIPLPNAVTSHGCYKSSGNMTTHEVQNM
SMGSCTKLCETNEFWVAGLQGNQCFCGFAYPPQKDVVEDKKCNYPCPSYPLEACGGLSDSGTSGYWSIFNLGLNV
NVKNFDSSSSTTSSSSQSTNANDQDPTQPTVVTQTHVTTQGSNSDQNKSSPNTAGIAAGAVAAVVAAAAIIGGLI
FYIRRKRNAQLEEEHRRNAAVSAFINGSKPPGSSGSMSMTDARLDPVMANRRMSDGSIADNEDYSRRILRVTNA*
Coding >Ophcf2|00553
ATGAAGACGTCGACAATTGCACTTGCGGCCCTGACGGCCACCTCTCAGGCCTATGCCGCCAGGGAAGCACCCAAC
CCCGTCGACCGCGATTTACGAGCCACCCTCGTCGAACGCCAGGCCGCACCCGCGCAGAAGCAGTCCCAGATCCCG
CTGCCGAACGCCGTCACCTCGCACGGATGCTACAAGTCCAGCGGTAATATGACGACGCACGAAGTCCAGAACATG
TCAATGGGCTCCTGCACAAAACTCTGCGAGACGAACGAGTTCTGGGTCGCGGGGCTTCAGGGCAATCAGTGCTTT
TGCGGCTTCGCTTATCCTCCCCAAAAGGACGTGGTGGAGGACAAGAAATGCAACTATCCTTGCCCTTCTTATCCC
TTGGAGGCTTGCGGTGGCCTCTCCGACTCAGGCACCAGCGGCTACTGGTCCATCTTCAACTTGGGCCTCAACGTC
AACGTCAAGAACTTTGACAGCTCGTCGTCGACCACGTCGAGCTCGTCTCAGTCTACCAACGCCAACGATCAGGAC
CCTACCCAGCCCACCGTCGTCACCCAGACGCATGTCACCACTCAGGGTTCCAATTCGGACCAGAACAAAAGCAGT
CCCAACACGGCTGGCATCGCTGCTGGCGCTGTCGCCGCCGTCGTCGCGGCCGCTGCCATTATTGGCGGGCTCATC
TTTTACATCCGGCGAAAGCGCAACGCTCAGCTCGAAGAGGAACACCGACGGAACGCTGCCGTCAGCGCATTCATC
AACGGTTCCAAGCCTCCTGGAAGCAGCGGGAGCATGTCCATGACGGATGCCCGTCTCGACCCCGTCATGGCCAAT
CGCAGGATGAGCGATGGCAGCATCGCTGATAATGAAGATTACTCCCGCAGAATTCTTCGGGTCACCAACGCATGA
Transcript >Ophcf2|00553
ATGAAGACGTCGACAATTGCACTTGCGGCCCTGACGGCCACCTCTCAGGCCTATGCCGCCAGGGAAGCACCCAAC
CCCGTCGACCGCGATTTACGAGCCACCCTCGTCGAACGCCAGGCCGCACCCGCGCAGAAGCAGTCCCAGATCCCG
CTGCCGAACGCCGTCACCTCGCACGGATGCTACAAGTCCAGCGGTAATATGACGACGCACGAAGTCCAGAACATG
TCAATGGGCTCCTGCACAAAACTCTGCGAGACGAACGAGTTCTGGGTCGCGGGGCTTCAGGGCAATCAGTGCTTT
TGCGGCTTCGCTTATCCTCCCCAAAAGGACGTGGTGGAGGACAAGAAATGCAACTATCCTTGCCCTTCTTATCCC
TTGGAGGCTTGCGGTGGCCTCTCCGACTCAGGCACCAGCGGCTACTGGTCCATCTTCAACTTGGGCCTCAACGTC
AACGTCAAGAACTTTGACAGCTCGTCGTCGACCACGTCGAGCTCGTCTCAGTCTACCAACGCCAACGATCAGGAC
CCTACCCAGCCCACCGTCGTCACCCAGACGCATGTCACCACTCAGGGTTCCAATTCGGACCAGAACAAAAGCAGT
CCCAACACGGCTGGCATCGCTGCTGGCGCTGTCGCCGCCGTCGTCGCGGCCGCTGCCATTATTGGCGGGCTCATC
TTTTACATCCGGCGAAAGCGCAACGCTCAGCTCGAAGAGGAACACCGACGGAACGCTGCCGTCAGCGCATTCATC
AACGGTTCCAAGCCTCCTGGAAGCAGCGGGAGCATGTCCATGACGGATGCCCGTCTCGACCCCGTCATGGCCAAT
CGCAGGATGAGCGATGGCAGCATCGCTGATAATGAAGATTACTCCCGCAGAATTCTTCGGGTCACCAACGCATGA
Gene >Ophcf2|00553
ATGAAGACGTCGACAATTGCACTTGCGGCCCTGACGGCCACCTCTCAGGCCTATGCCGCCAGGGAAGCACCCAAC
CCCGTCGACCGCGATTTACGAGCCACCCTCGTCGAACGCCAGGCCGCACCCGCGCAGAAGCAGTCCCAGATCCCG
CTGCCGAACGCCGTCACCTCGCACGGATGCTACAAGTCCAGCGGTAATATGACGACGCACGAAGTCCAGAACATG
TCAATGGGCTCCTGCACAAAACTCTGCGAGACGAACGAGTTCTGGGTCGCGGGGCTTCAGGGCAATCAGTGCTTT
TGCGGCTTCGCTTATCCTCCCCAAAAGGACGTGGTGGAGGACAAGAAATGCAACTATCCTTGCCCTTCTTATCCC
TTGGAGGCTTGCGGTGGCCTCTCCGACTCAGGCACCAGCGGCTACTGGTCCATCTTCAACTTGGGCCTCAACGTC
AACGTCAAGAACTTTGACAGCTCGTCGTCGACCACGTCGAGCTCGTCTCAGTCTACCAACGCCAACGATCAGGAC
CCTACCCAGCCCACCGTCGTCACCCAGACGCATGTCACCACTCAGGGTTCCAATTCGGACCAGAACAAAAGCAGT
CCCAACACGGCTGGCATCGCTGCTGGCGCTGTCGCCGCCGTCGTCGCGGCCGCTGCCATTATTGGCGGGCTCATC
TTTTACATCCGGCGAAAGCGCAACGCTCAGCTCGAAGAGGAACACCGACGGAACGCTGCCGTCAGCGCATTCATC
AACGGTTCCAAGCCTCCTGGAAGCAGCGGGAGCATGTCCATGACGGATGCCCGTCTCGACCCCGTCATGGCCAAT
CGCAGGATGAGCGATGGCAGCATCGCTGATAATGAAGATTACTCCCGCAGAATTCTTCGGGTATGTCCCAGACCT
TTCCAATATGCGAGGAAACTTACTTACTTTTCGCCCCAGGTCACCAACGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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