Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00544
Gene name
Locationscaffold_01:2188412..2190788
Strand-
Gene length (bp)2376
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 8.1E-46 27 510
PF00324 AA_permease Amino acid permease 2.0E-12 271 522

GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 59 81 22
3 161 183 22
4 193 215 22
5 222 239 17
6 259 281 22
7 301 323 22
8 349 371 22
9 403 425 22
10 468 490 22
11 502 521 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 0.00 0.00 0.00
Alive In ants, during behavior modification 9.36 3.46 15.25
Dead In ants, recently dead 9.95 3.99 15.92

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.838124 no
Dead Fungus 0.000238 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00544
MDPNSSDEAQLAALGLRSELRRSFSTLSMLGLAFAVLNTWTAVSASLPVSLTSGGSTSIIWGLFAAGLCNLCIAA
SLAELLSAYPTCRGQYHWVAASTTISLIPDFTRSVLTVCLQVSWPSWMPLLSWINGWIAIAGWVRPLHIQISSPV
TYILTRPPSQVALVATNALLSSQLIVGIVSLLRPSYEAQRWHQFLIYTALTMLSFLVNAFLNSLLPLIYRGAFAW
SIGGFVVACVVMLACSSPDFHSADFVFGQFINRTGWPDGVAWLLGLLQGGLGVTAFDAVAHMIEEIPQASLQGPK
IMMLCVIIGTVTGAIFLAVLLSVSGNMESVISSSAGPLLQILVNATGNAAGAVCLVMLPLVCLVFALLSVMTTSS
RIIYAFARDGGLPASTVFARVHPKLGQPLNALALSSAVVVLFGLIFMASSSAFNAIMSSSVVALDLSYAMPIAIR
CLRGRSRLVQGQWKLSPVLGWTVDVVSLAYITLTTFLFLLPPVRPVTGTNMNYCVVAFAVVIVVSVLQWLVDGRK
KFVGPRLGGFDSAEERHEPSEKEEKK*
Coding >Ophcf2|00544
ATGGACCCCAACAGTAGCGACGAAGCTCAACTCGCCGCTCTCGGCCTCCGCTCCGAACTCCGCCGGTCCTTTTCA
ACCCTATCTATGCTCGGCCTCGCCTTTGCCGTCCTCAACACCTGGACGGCCGTATCGGCGAGCCTGCCCGTAAGC
CTCACTTCCGGAGGCAGCACCAGCATCATCTGGGGTCTCTTTGCGGCTGGGTTGTGCAACCTGTGCATCGCGGCT
TCGCTCGCTGAACTCCTCTCGGCATATCCTACTTGCCGGGGGCAGTATCATTGGGTGGCCGCCAGTACGACGATA
TCCCTCATCCCCGACTTCACCCGCTCCGTTCTGACAGTTTGCCTTCAAGTCTCGTGGCCTTCATGGATGCCTCTT
CTGTCGTGGATCAACGGCTGGATCGCCATTGCCGGCTGGGTTCGGCCTCTACATATCCAGATATCCTCCCCCGTT
ACATACATACTGACACGGCCTCCTTCGCAGGTCGCCCTGGTGGCCACCAACGCGCTGCTATCAAGCCAGCTGATA
GTCGGCATCGTCTCACTGCTACGTCCCAGCTACGAGGCTCAAAGATGGCATCAGTTCCTCATCTACACTGCCCTG
ACGATGCTCTCCTTTCTCGTCAACGCCTTTCTCAACTCGCTGCTCCCGCTCATCTACCGCGGGGCTTTCGCCTGG
TCCATCGGTGGCTTCGTCGTTGCCTGTGTCGTCATGCTGGCCTGTTCATCTCCGGACTTTCACTCGGCTGACTTT
GTCTTTGGTCAGTTCATCAACCGGACGGGATGGCCGGATGGCGTCGCCTGGCTGCTAGGGCTTCTTCAGGGGGGA
CTCGGCGTTACGGCTTTCGATGCCGTAGCACACATGATCGAAGAGATCCCCCAGGCCTCCCTCCAGGGCCCCAAG
ATCATGATGCTCTGCGTCATCATCGGCACCGTGACGGGCGCCATCTTCCTCGCCGTCCTTCTCTCCGTCTCGGGA
AACATGGAATCCGTCATCAGCTCGAGCGCCGGCCCGCTGCTGCAGATCTTGGTCAACGCCACTGGCAACGCGGCC
GGGGCCGTCTGTCTTGTCATGTTGCCTCTGGTCTGCCTCGTCTTTGCTCTTTTGAGTGTCATGACGACGAGCAGT
CGTATCATATACGCCTTTGCGCGTGACGGTGGTCTTCCGGCCTCGACCGTCTTCGCCAGAGTCCATCCCAAACTT
GGTCAGCCGCTCAACGCCCTGGCTCTCAGCTCGGCCGTCGTCGTTCTGTTCGGGCTGATCTTCATGGCTTCGTCG
AGCGCCTTCAACGCCATCATGTCGTCCTCGGTCGTCGCCCTCGACCTCTCGTACGCCATGCCCATCGCCATACGC
TGCCTCCGCGGACGTAGTCGGCTCGTTCAGGGGCAATGGAAGCTGTCTCCCGTTCTGGGATGGACAGTTGACGTG
GTCTCACTGGCCTACATAACGCTGACGACCTTTTTGTTCCTGCTGCCGCCTGTCCGGCCCGTAACGGGGACTAAC
ATGAATTACTGCGTCGTGGCCTTTGCCGTCGTCATCGTCGTCTCCGTCCTTCAATGGCTCGTCGACGGCCGGAAG
AAGTTCGTCGGGCCGCGACTCGGCGGCTTCGACTCGGCTGAGGAGAGACACGAGCCGTCTGAGAAGGAGGAGAAG
AAGTAG
Transcript >Ophcf2|00544
ATGGACCCCAACAGTAGCGACGAAGCTCAACTCGCCGCTCTCGGCCTCCGCTCCGAACTCCGCCGGTCCTTTTCA
ACCCTATCTATGCTCGGCCTCGCCTTTGCCGTCCTCAACACCTGGACGGCCGTATCGGCGAGCCTGCCCGTAAGC
CTCACTTCCGGAGGCAGCACCAGCATCATCTGGGGTCTCTTTGCGGCTGGGTTGTGCAACCTGTGCATCGCGGCT
TCGCTCGCTGAACTCCTCTCGGCATATCCTACTTGCCGGGGGCAGTATCATTGGGTGGCCGCCAGTACGACGATA
TCCCTCATCCCCGACTTCACCCGCTCCGTTCTGACAGTTTGCCTTCAAGTCTCGTGGCCTTCATGGATGCCTCTT
CTGTCGTGGATCAACGGCTGGATCGCCATTGCCGGCTGGGTTCGGCCTCTACATATCCAGATATCCTCCCCCGTT
ACATACATACTGACACGGCCTCCTTCGCAGGTCGCCCTGGTGGCCACCAACGCGCTGCTATCAAGCCAGCTGATA
GTCGGCATCGTCTCACTGCTACGTCCCAGCTACGAGGCTCAAAGATGGCATCAGTTCCTCATCTACACTGCCCTG
ACGATGCTCTCCTTTCTCGTCAACGCCTTTCTCAACTCGCTGCTCCCGCTCATCTACCGCGGGGCTTTCGCCTGG
TCCATCGGTGGCTTCGTCGTTGCCTGTGTCGTCATGCTGGCCTGTTCATCTCCGGACTTTCACTCGGCTGACTTT
GTCTTTGGTCAGTTCATCAACCGGACGGGATGGCCGGATGGCGTCGCCTGGCTGCTAGGGCTTCTTCAGGGGGGA
CTCGGCGTTACGGCTTTCGATGCCGTAGCACACATGATCGAAGAGATCCCCCAGGCCTCCCTCCAGGGCCCCAAG
ATCATGATGCTCTGCGTCATCATCGGCACCGTGACGGGCGCCATCTTCCTCGCCGTCCTTCTCTCCGTCTCGGGA
AACATGGAATCCGTCATCAGCTCGAGCGCCGGCCCGCTGCTGCAGATCTTGGTCAACGCCACTGGCAACGCGGCC
GGGGCCGTCTGTCTTGTCATGTTGCCTCTGGTCTGCCTCGTCTTTGCTCTTTTGAGTGTCATGACGACGAGCAGT
CGTATCATATACGCCTTTGCGCGTGACGGTGGTCTTCCGGCCTCGACCGTCTTCGCCAGAGTCCATCCCAAACTT
GGTCAGCCGCTCAACGCCCTGGCTCTCAGCTCGGCCGTCGTCGTTCTGTTCGGGCTGATCTTCATGGCTTCGTCG
AGCGCCTTCAACGCCATCATGTCGTCCTCGGTCGTCGCCCTCGACCTCTCGTACGCCATGCCCATCGCCATACGC
TGCCTCCGCGGACGTAGTCGGCTCGTTCAGGGGCAATGGAAGCTGTCTCCCGTTCTGGGATGGACAGTTGACGTG
GTCTCACTGGCCTACATAACGCTGACGACCTTTTTGTTCCTGCTGCCGCCTGTCCGGCCCGTAACGGGGACTAAC
ATGAATTACTGCGTCGTGGCCTTTGCCGTCGTCATCGTCGTCTCCGTCCTTCAATGGCTCGTCGACGGCCGGAAG
AAGTTCGTCGGGCCGCGACTCGGCGGCTTCGACTCGGCTGAGGAGAGACACGAGCCGTCTGAGAAGGAGGAGAAG
AAGTAG
Gene >Ophcf2|00544
ATGGACCCCAACAGTAGCGACGAAGCTCAACTCGCCGCTCTCGGCCTCCGCTCCGAACTCCGCCGGTCCTTTTCA
ACCCTATCTATGCTCGGCCTCGCCTTTGCCGTCCTCAACGTTGGAAATCGCCCTTCCTCCCCTCCCCTCACCGGC
CAGCGGGAAAGCCGAAGCTGACGGTGGCCGCAGACCTGGACGGCCGTATCGGCGAGCCTGCCCGTAAGCCTCACT
TCCGGAGGCAGCACCAGCATCATCTGGGGTGCGTCGTGTTCATCGTCTTGCTCACACGTCTCGACGTCTCTGATG
GAGAGCCAAGGTCTCTTTGCGGCTGGGTTGTGCAACCTGTGCATCGCGGCTTCGCTCGCTGAACTCCTCTCGGCA
TATCCTACGTGAGATTCCTCTTTGTCGTTTACTTGGTTTTTTTTTTTTTCACTCATTTGTTTCAGTTGCCGGGGG
CAGTATCATTGGGTGGCCGGTAAGCCCATGTCTTTTCTTTGTCCATGTCTGAAGCTCGTCCTCGGCGCTTACACC
GGAATCCGGCAGCCAGTACGACGATATCCCTCATCCCCGACTTCACCCGCTCCGTTCTGACAGTTTGCCTTCAAG
TCTCGTGGCCTTCATGGATGCCTCTTCTGTCGTGGATCAACGGCTGGATCGCCATTGCCGGCTGGGTTCGGCCTC
TACATATCCAGATATCCTCCCCCGTTACATACATACTGACACGGCCTCCTTCGCAGGTCGCCCTGGTGGCCACCA
ACGCGCTGCTATCAAGCCAGCTGATAGTCGGCATCGTCTCACTGCTACGTCCCAGCTACGAGGCTCAAAGATGGC
ATCAGTTCCTCATCTACACTGCCCTGACGATGCTCTCCTTTCTCGTCAACGCCTTTCTCAACTCGCTGCTCCCGC
TCATCTACCGCGGGGCTTTCGCCTGGTCCATCGGTGGCTTCGTCGTTGCCTGTGTCGTCATGCTGGCCTGTTCAT
CTCCGGACTTTCACTCGGCTGACTTTGTCTTTGGTCAGTTCATCAACCGGACGGGATGTAGGTTCTCTTCCTCGG
CGTGCTGCTGCTTGACATGGTAGAGCTGAGCCTTTTTTTTTTTTTTGTATCAGGGCCGGATGGCGTCGCCTGGCT
GCTAGGGGTGAGCAGCTCGACTTTTCGGATGCCAGTCGGGCTTCTGATGTGCTGTTGGATAGCTTCTTCAGGGGG
GACTCGGCGTTACGGCTTTCGTACGTCACCGTCTCCTTCTTTTCGAAAGACGACGAGACTCACGTATGGACAGGA
TGCCGTAGCACACATGATCGAAGGTAACACGCCTTTCCTCTCCAACCCTCGTCGATAAACCGCCTCCTCACCAGC
TCAGAGATCCCCCAGGCCTCCCTCCAGGGCCCCAAGATCATGATGCTCTGCGTCATCATCGGCACCGTGACGGGC
GCCATCTTCCTCGCCGTCCTTCTCTCCGTCTCGGGAAACATGGAATCCGTCATCAGCTCGAGCGCCGGCCCGCTG
CTGCAGATCTTGGTCAACGCCACTGGCAACGCGGCCGGGGCCGTCTGTCTTGTCATGTGCGTTCCCCGTGACGGT
GTTGTGATGAGTCTGGCTGCTGATCAGGGGTCAGGTTGCCTCTGGTCTGCCTCGTCTTTGCTCTTTTGAGTGTCA
TGACGACGAGCAGTCGTATCATATACGCCTTTGCGCGGTACGATCTGTATCCGATGGAAAGACTCGGTTCATGGC
TCTGATGGAAGCGCAGTGACGGTGGTCTTCCGGCCTCGACCGTCTTCGCCAGAGTCCATCCCAAACTTGGTCAGC
CGCTCAACGCCCTGGCTCTCAGCTCGGCCGTCGTCGTTCTGTTCGGGCTGATCTTCATGGCTTCGTCGAGGTGTG
TTTGTGTGTCCGGCGGCGGTAGAGAGGCTACGATACTTACAAGACGAGCGCCTTCAACGCCATCATGTCGTCCTC
GGTCGTCGCCCTCGACCTCTCGTACGCCATGCCCATCGCCATACGCTGCCTCCGCGGACGTAGTCGGCTCGTTCA
GGGGCAATGGAAGCTGTCTCCCGTTCTGGGATGGACAGTTGACGTGGTCTCACTGGCCTACATAACGCTGACGAC
CTTTTTGTTCCTGCTGCCGCCTGTCCGGCCCGTAACGGGGACTAACATGAGTAAGTAGGTGACGCAGGTCAAGTC
GTGGTGATCAAAGTACGGAATGATTGAGTTGTTGCTGACGACTCTTCAGATTACTGCGTCGTGGCCTTTGCCGTC
GTCATCGTCGTCTCCGTCCTTCAATGGCTCGTCGACGGCCGGAAGAAGTTCGTCGGGCCGCGACTCGGCGGCTTC
GACTCGGCTGAGGAGAGACACGAGCCGTCTGAGAAGGAGGAGAAGAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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