Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00509
Gene name
Locationscaffold_01:2109919..2111330
Strand+
Gene length (bp)1411
Transcript length (bp)1344
Coding sequence length (bp)1344
Protein length (aa) 448

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14378 PAP2_3 PAP2 superfamily 2.7E-24 160 338
PF01569 PAP2 PAP2 superfamily 3.6E-08 229 340

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 73 95 22
2 115 137 22
3 144 166 22
4 176 198 22
5 205 224 19
6 271 293 22
7 300 317 17
8 322 339 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00509
MDSPGSPPRKPVLPTLWTDILSDSGRRQHRPRSRSDVKALRYNPSDVASLQRSFSLWDGVRDLQRRRWRPADVQY
LFLAALTLFSLAIAPPAPVLKASALVAASWILLMPATRQFFLPSVTIWVWLVYFFCSRFIPYDYRPHIWVRVLPA
LENVLYGANLSNILSAHQHAVLDILAWMPYGIIHFGAPATCSLLMFIFAAPGTTAVFARTFGWMSILGVTIQLVF
PCTPPWYENEHGLVPATYGMPGSPAGLARIDAIFGIDLYTTNFTAAPLPFGAFPSLHGGYAVLEALFMSHCFPQF
RVFFIGYAGWIWWSTMYLSHHYAIDLVGGGLIAMAFFYSARARWLPRRQPDKLTRWDYDYVEIGTGARVADEEYG
MGPVAAGHYLGLGLLHRRPSSSDGWTIGSSSSYSTNSGTISPTSSDSSSGVFADMDQQAPWESDAEVPPSQR*
Coding >Ophcf2|00509
ATGGACAGCCCGGGCTCACCCCCCAGGAAGCCGGTCCTCCCGACTCTGTGGACCGACATCCTGTCCGACTCCGGC
CGTCGCCAACACCGTCCCAGGAGTCGCTCCGACGTCAAGGCCCTGCGTTACAACCCTTCCGATGTCGCCTCGCTG
CAGCGTTCCTTTAGCCTGTGGGATGGCGTCCGTGACCTGCAGAGGCGACGCTGGCGACCCGCCGACGTCCAGTAC
CTGTTCCTCGCCGCCCTCACCCTCTTCTCTCTCGCCATCGCTCCGCCCGCTCCCGTCCTCAAGGCCTCGGCTCTC
GTCGCCGCCTCCTGGATACTCCTTATGCCCGCCACTCGCCAGTTCTTTCTACCCTCCGTCACTATCTGGGTTTGG
CTCGTCTACTTCTTCTGCAGCCGATTCATTCCCTACGACTATCGCCCTCACATCTGGGTCCGCGTCCTGCCTGCG
TTAGAAAACGTCCTCTATGGCGCCAACCTGTCAAACATCCTCTCCGCCCACCAGCATGCCGTTCTCGACATTCTC
GCCTGGATGCCCTACGGCATCATCCATTTCGGTGCCCCGGCCACGTGCTCGCTGCTAATGTTTATTTTCGCCGCT
CCCGGCACCACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATCCTCGGCGTCACCATCCAGCTCGTCTTT
CCCTGCACCCCGCCCTGGTACGAGAACGAGCACGGCTTGGTGCCAGCCACCTACGGCATGCCCGGTTCGCCCGCC
GGCTTGGCCCGCATTGACGCCATCTTCGGCATCGATCTCTACACCACAAACTTCACCGCTGCCCCCCTGCCCTTT
GGCGCCTTTCCCTCGTTGCACGGTGGCTATGCCGTGCTCGAGGCTCTCTTCATGAGCCACTGCTTCCCACAGTTC
CGCGTCTTCTTCATCGGCTATGCCGGCTGGATTTGGTGGTCCACCATGTACTTGAGCCACCACTACGCCATCGAT
CTCGTCGGTGGCGGCCTCATCGCCATGGCCTTCTTTTACTCGGCCCGGGCTCGTTGGCTGCCGCGCCGCCAGCCC
GACAAGCTGACACGCTGGGACTACGACTACGTCGAGATTGGCACCGGTGCCCGCGTCGCCGACGAAGAGTACGGC
ATGGGCCCCGTTGCCGCCGGCCACTACCTCGGCCTCGGTTTGCTGCACCGTCGCCCCAGCTCGAGCGACGGCTGG
ACCATAGGAAGCAGTTCCAGCTACAGCACCAATAGCGGCACCATCAGCCCGACCTCGTCCGACTCATCTTCCGGC
GTCTTCGCAGACATGGACCAGCAGGCGCCCTGGGAAAGTGACGCCGAAGTCCCGCCCTCCCAGAGGTGA
Transcript >Ophcf2|00509
ATGGACAGCCCGGGCTCACCCCCCAGGAAGCCGGTCCTCCCGACTCTGTGGACCGACATCCTGTCCGACTCCGGC
CGTCGCCAACACCGTCCCAGGAGTCGCTCCGACGTCAAGGCCCTGCGTTACAACCCTTCCGATGTCGCCTCGCTG
CAGCGTTCCTTTAGCCTGTGGGATGGCGTCCGTGACCTGCAGAGGCGACGCTGGCGACCCGCCGACGTCCAGTAC
CTGTTCCTCGCCGCCCTCACCCTCTTCTCTCTCGCCATCGCTCCGCCCGCTCCCGTCCTCAAGGCCTCGGCTCTC
GTCGCCGCCTCCTGGATACTCCTTATGCCCGCCACTCGCCAGTTCTTTCTACCCTCCGTCACTATCTGGGTTTGG
CTCGTCTACTTCTTCTGCAGCCGATTCATTCCCTACGACTATCGCCCTCACATCTGGGTCCGCGTCCTGCCTGCG
TTAGAAAACGTCCTCTATGGCGCCAACCTGTCAAACATCCTCTCCGCCCACCAGCATGCCGTTCTCGACATTCTC
GCCTGGATGCCCTACGGCATCATCCATTTCGGTGCCCCGGCCACGTGCTCGCTGCTAATGTTTATTTTCGCCGCT
CCCGGCACCACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATCCTCGGCGTCACCATCCAGCTCGTCTTT
CCCTGCACCCCGCCCTGGTACGAGAACGAGCACGGCTTGGTGCCAGCCACCTACGGCATGCCCGGTTCGCCCGCC
GGCTTGGCCCGCATTGACGCCATCTTCGGCATCGATCTCTACACCACAAACTTCACCGCTGCCCCCCTGCCCTTT
GGCGCCTTTCCCTCGTTGCACGGTGGCTATGCCGTGCTCGAGGCTCTCTTCATGAGCCACTGCTTCCCACAGTTC
CGCGTCTTCTTCATCGGCTATGCCGGCTGGATTTGGTGGTCCACCATGTACTTGAGCCACCACTACGCCATCGAT
CTCGTCGGTGGCGGCCTCATCGCCATGGCCTTCTTTTACTCGGCCCGGGCTCGTTGGCTGCCGCGCCGCCAGCCC
GACAAGCTGACACGCTGGGACTACGACTACGTCGAGATTGGCACCGGTGCCCGCGTCGCCGACGAAGAGTACGGC
ATGGGCCCCGTTGCCGCCGGCCACTACCTCGGCCTCGGTTTGCTGCACCGTCGCCCCAGCTCGAGCGACGGCTGG
ACCATAGGAAGCAGTTCCAGCTACAGCACCAATAGCGGCACCATCAGCCCGACCTCGTCCGACTCATCTTCCGGC
GTCTTCGCAGACATGGACCAGCAGGCGCCCTGGGAAAGTGACGCCGAAGTCCCGCCCTCCCAGAGGTGA
Gene >Ophcf2|00509
ATGGACAGCCCGGGCTCACCCCCCAGGAAGCCGGTCCTCCCGACTCTGTGGACCGACATCCTGTCCGACTCCGGC
CGTCGCCAACACCGTCCCAGGAGTCGCTCCGACGTCAAGGCCCTGCGTTACAACCCTTCCGATGTCGCCTCGCTG
CAGCGTTCCTTTAGCCTGTGGGATGGCGTCCGTGACCTGCAGAGGCGACGCTGGCGACCCGCCGACGTCCAGTAC
CTGTTCCTCGCCGCCCTCACCCTCTTCTCTCTCGCCATCGCTCCGCCCGCTCCCGTCCTCAAGGCCTCGGCTCTC
GTCGCCGCCTCCTGGATACTCCTTATGCCCGCCACTCGCCAGTTCTTTCTACCCTCCGTCACTATCTGGGTTTGG
CTCGTCTACTTCTTCTGCAGCCGGTGAGTTCAAACTCTGTTCATATCGTCGCATCTAACCCGCTGACGACGACGA
CGACGACGACGACAGATTCATTCCCTACGACTATCGCCCTCACATCTGGGTCCGCGTCCTGCCTGCGTTAGAAAA
CGTCCTCTATGGCGCCAACCTGTCAAACATCCTCTCCGCCCACCAGCATGCCGTTCTCGACATTCTCGCCTGGAT
GCCCTACGGCATCATCCATTTCGGTGCCCCGGCCACGTGCTCGCTGCTAATGTTTATTTTCGCCGCTCCCGGCAC
CACGGCCGTCTTCGCCCGCACCTTTGGCTGGATGAGCATCCTCGGCGTCACCATCCAGCTCGTCTTTCCCTGCAC
CCCGCCCTGGTACGAGAACGAGCACGGCTTGGTGCCAGCCACCTACGGCATGCCCGGTTCGCCCGCCGGCTTGGC
CCGCATTGACGCCATCTTCGGCATCGATCTCTACACCACAAACTTCACCGCTGCCCCCCTGCCCTTTGGCGCCTT
TCCCTCGTTGCACGGTGGCTATGCCGTGCTCGAGGCTCTCTTCATGAGCCACTGCTTCCCACAGTTCCGCGTCTT
CTTCATCGGCTATGCCGGCTGGATTTGGTGGTCCACCATGTACTTGAGCCACCACTACGCCATCGATCTCGTCGG
TGGCGGCCTCATCGCCATGGCCTTCTTTTACTCGGCCCGGGCTCGTTGGCTGCCGCGCCGCCAGCCCGACAAGCT
GACACGCTGGGACTACGACTACGTCGAGATTGGCACCGGTGCCCGCGTCGCCGACGAAGAGTACGGCATGGGCCC
CGTTGCCGCCGGCCACTACCTCGGCCTCGGTTTGCTGCACCGTCGCCCCAGCTCGAGCGACGGCTGGACCATAGG
AAGCAGTTCCAGCTACAGCACCAATAGCGGCACCATCAGCCCGACCTCGTCCGACTCATCTTCCGGCGTCTTCGC
AGACATGGACCAGCAGGCGCCCTGGGAAAGTGACGCCGAAGTCCCGCCCTCCCAGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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