Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00496
Gene name
Locationscaffold_01:2076072..2077325
Strand-
Gene length (bp)1253
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.9E-19 31 113
PF00153 Mito_carr Mitochondrial carrier protein 7.8E-12 121 213
PF00153 Mito_carr Mitochondrial carrier protein 1.9E-16 221 302

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 117 139 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00496
MAPPSDSPPVASSRPRSTEDRSWSKAIRYPFWFGGSASSMAACVTHPLDLVKVRLQTRQGDAPRTMTGTFVRIAR
HDGLAGLYSGISASLLRQLTYSTVRFGLYEEMKTRYQRRRGGAPSFATLTAMAVASGFLGGVAGNFADVLNVRMQ
HDAALPPRERRNYRNAFDGLVRMVRCEGTAACFRGWLPNSCRAAVMTAGQLATYDVFKRTLIRYTPMTDTPTTHL
SASFLAGLAAATATSPIDVIKTRVMSSSQNQGIIRLVGDIYRTDGIRWMFKGWLPSFLRLGPHTICTFVFLELHR
SAYRRLTHEDDTK*
Coding >Ophcf2|00496
ATGGCTCCTCCGAGCGATTCCCCGCCGGTGGCCTCCTCCCGGCCCCGGTCCACAGAGGACCGCTCGTGGAGCAAG
GCCATTCGATATCCCTTCTGGTTCGGGGGCAGCGCGAGCAGCATGGCCGCCTGCGTGACGCACCCGCTGGACCTG
GTAAAGGTTCGACTGCAGACAAGGCAAGGCGATGCGCCTCGGACCATGACGGGCACCTTTGTGCGCATCGCTCGC
CACGATGGCCTCGCCGGCCTCTACAGCGGCATCTCGGCCTCGCTGCTACGCCAGCTGACGTACTCGACCGTTCGC
TTCGGCCTTTACGAGGAGATGAAGACGAGATATCAGCGGAGGCGTGGCGGTGCGCCCTCCTTCGCAACCTTGACC
GCCATGGCTGTTGCCTCGGGCTTTCTAGGCGGCGTGGCTGGTAACTTTGCAGATGTTCTCAACGTCCGCATGCAG
CACGACGCCGCGCTTCCTCCACGAGAGCGTCGAAACTACCGCAATGCTTTCGATGGCCTCGTCCGCATGGTTCGC
TGCGAGGGTACTGCCGCCTGCTTCCGAGGCTGGCTGCCCAACAGCTGTCGCGCCGCCGTCATGACCGCCGGCCAG
CTCGCCACCTACGATGTCTTCAAGCGCACTCTCATCCGCTACACGCCCATGACAGATACCCCCACGACTCACCTG
TCGGCCTCATTCCTCGCCGGCCTGGCTGCTGCCACGGCTACGAGCCCCATCGACGTCATCAAAACGCGCGTCATG
TCATCGTCTCAGAACCAGGGCATCATCCGCCTCGTCGGCGACATCTACAGGACAGACGGCATCCGATGGATGTTC
AAGGGCTGGCTCCCCAGTTTCCTTCGGCTCGGGCCGCACACCATCTGCACATTTGTTTTCCTAGAATTGCATCGC
TCCGCTTATAGACGACTCACGCACGAGGACGACACAAAATAG
Transcript >Ophcf2|00496
ATGGCTCCTCCGAGCGATTCCCCGCCGGTGGCCTCCTCCCGGCCCCGGTCCACAGAGGACCGCTCGTGGAGCAAG
GCCATTCGATATCCCTTCTGGTTCGGGGGCAGCGCGAGCAGCATGGCCGCCTGCGTGACGCACCCGCTGGACCTG
GTAAAGGTTCGACTGCAGACAAGGCAAGGCGATGCGCCTCGGACCATGACGGGCACCTTTGTGCGCATCGCTCGC
CACGATGGCCTCGCCGGCCTCTACAGCGGCATCTCGGCCTCGCTGCTACGCCAGCTGACGTACTCGACCGTTCGC
TTCGGCCTTTACGAGGAGATGAAGACGAGATATCAGCGGAGGCGTGGCGGTGCGCCCTCCTTCGCAACCTTGACC
GCCATGGCTGTTGCCTCGGGCTTTCTAGGCGGCGTGGCTGGTAACTTTGCAGATGTTCTCAACGTCCGCATGCAG
CACGACGCCGCGCTTCCTCCACGAGAGCGTCGAAACTACCGCAATGCTTTCGATGGCCTCGTCCGCATGGTTCGC
TGCGAGGGTACTGCCGCCTGCTTCCGAGGCTGGCTGCCCAACAGCTGTCGCGCCGCCGTCATGACCGCCGGCCAG
CTCGCCACCTACGATGTCTTCAAGCGCACTCTCATCCGCTACACGCCCATGACAGATACCCCCACGACTCACCTG
TCGGCCTCATTCCTCGCCGGCCTGGCTGCTGCCACGGCTACGAGCCCCATCGACGTCATCAAAACGCGCGTCATG
TCATCGTCTCAGAACCAGGGCATCATCCGCCTCGTCGGCGACATCTACAGGACAGACGGCATCCGATGGATGTTC
AAGGGCTGGCTCCCCAGTTTCCTTCGGCTCGGGCCGCACACCATCTGCACATTTGTTTTCCTAGAATTGCATCGC
TCCGCTTATAGACGACTCACGCACGAGGACGACACAAAATAG
Gene >Ophcf2|00496
ATGGCTCCTCCGAGCGATTCCCCGCCGGTGGCCTCCTCCCGGCCCCGGTCCACAGAGGACCGCTCGTGGAGCAAG
GCCATTCGATATCCCTTCTGGTTCGGGGGCAGCGCGAGCAGCATGGCCGCCTGCGTGACGCACCCGCTGGACCTG
GGTAAAGCCTCAGGCCTCCAAGAGCCGCCATCTCACAGACCTAGACACTGACGAGATTCAACAGTAAAGGTACGG
ACCTCGGCTCCTCTGGGACGCTCCCCATCAGCACACGCCCTCGCCGCGTAATACCCTCTCGAAAGCCCAAACGTT
CCGCGAAACCTGACATGCCGTCTCTTCTCCTCCCCCCCCCCCCTTCTCTCCTGGGCCCCCTCGTCTTCCAGGTTC
GACTGCAGACAAGGCAAGGCGATGCGCCTCGGACCATGACGGGCACCTTTGTGCGCATCGCTCGCCACGATGGCC
TCGCCGGCCTCTACAGCGGCATCTCGGCCTCGCTGCTACGCCAGCTGACGTACTCGACCGTTCGCTTCGGCCTTT
ACGAGGAGATGAAGACGAGATATCAGCGGAGGCGTGGCGGTGCGCCCTCCTTCGCAACCTTGACCGCCATGGCTG
TTGCCTCGGGCTTTCTAGGCGGCGTGGCTGGTAACTTTGCAGATGTTCTCAACGTCCGCATGCAGCACGACGCCG
CGCTTCCTCCACGAGAGCGTCGAAACTACCGCAATGCTTTCGATGGCCTCGTCCGCATGGTTCGCTGCGAGGGTA
CTGCCGCCTGCTTCCGAGGCTGGCTGCCCAACAGCTGTCGCGCCGCCGTCATGACCGCCGGCCAGCTCGCCACCT
ACGATGTCTTCAAGCGCACTCTCATCCGCTACACGCCCATGACAGATACCCCCACGACTCACCTGTCGGCCTCAT
TCCTCGCCGGCCTGGCTGCTGCCACGGCTACGAGCCCCATCGACGTCATCAAAACGCGCGTCATGTCATCGTCTC
AGAACCAGGGCATCATCCGCCTCGTCGGCGACATCTACAGGACAGACGGCATCCGATGGATGTTCAAGGGCTGGC
TCCCCAGTTTCCTTCGGCTCGGGCCGTGAGTCGGGCCCGATTGATTTTTTTTTCCCCCCCTTCCCCTCGTCTCCC
TGTCTTCGCTGCCCCCTTCTTGTCTGTTTCTACTAACGTGGCTCAGGCACACCATCTGCACATTTGTTTTCCTAG
AATTGCATCGCTCCGCTTATAGACGACTCACGCACGAGGACGACACAAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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