Protein ID | Ophcf2|00448 |
Gene name | |
Location | scaffold_01:1821581..1822796 |
Strand | - |
Gene length (bp) | 1215 |
Transcript length (bp) | 1104 |
Coding sequence length (bp) | 1104 |
Protein length (aa) | 368 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 9.7E-14 | 82 | 200 |
PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 5.8E-10 | 83 | 346 |
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 5.8E-09 | 83 | 186 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 26 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 4 | 26 | 22 |
2 | 165 | 187 | 22 |
3 | 197 | 219 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00448 MDHFSPATGFALLAVAASLLLVTSAARRRNQRVLRGPPRLQGGDDKAVQLVYQPDSLPGARDVDTPYGCVRVYEF GPEHGPKVLLVHGITTPCLPLAPLAHALVDRGCRVMLFDLFGRGFSDGVGDLPHDARLYVSQMLCVVASSPLPWT GHGALRLIGYSMGGAIAIHFAIAFPHLVGSLVLLAPAGLIRFDAYTSVARRLALAGAVPEFLLAAYAAFRLRSPL STHAPASRPALAVAAAEAEVSSMGSTHVPLEDSVSDYVRWMIGHHPGFVPAFLSCMRHAPLNEQHEAWRRLATRP PRSTAVLLAEDDELISPAIYAREGLPLAGGPDRVVWKVLPGTHDFIMTHVDPILDELDSLWQMKKPA* |
Coding | >Ophcf2|00448 ATGGATCACTTCTCTCCTGCCACCGGCTTCGCTCTCCTCGCCGTCGCCGCGTCGCTGCTCCTCGTCACTTCGGCC GCCCGACGACGGAACCAGCGGGTGCTGCGCGGACCGCCTCGGCTGCAGGGTGGCGACGACAAGGCGGTTCAGCTC GTCTACCAGCCAGATTCGCTGCCTGGTGCGAGAGACGTCGATACCCCGTACGGCTGCGTCCGCGTCTACGAGTTT GGCCCCGAACATGGCCCCAAGGTGCTGCTCGTTCACGGCATCACGACGCCCTGTCTTCCCCTTGCGCCTCTGGCT CACGCCTTGGTCGATCGTGGATGTCGCGTCATGCTCTTTGACCTCTTTGGTCGAGGCTTTTCAGACGGTGTCGGC GACCTCCCTCACGATGCCCGTCTCTACGTCTCGCAGATGCTCTGTGTCGTCGCCTCCAGCCCTTTACCCTGGACA GGTCATGGCGCGCTCCGTCTCATCGGCTACTCCATGGGCGGTGCCATCGCCATTCACTTTGCCATCGCCTTTCCC CATCTCGTTGGCTCTCTGGTTCTGCTCGCCCCGGCTGGCCTCATCCGCTTCGATGCCTATACCTCGGTTGCTCGT CGTCTAGCCCTCGCCGGTGCCGTGCCCGAGTTTCTCCTCGCCGCCTACGCCGCCTTCCGTCTGCGCTCCCCTCTG TCCACGCATGCTCCCGCTTCGAGGCCGGCCCTTGCCGTGGCCGCCGCCGAGGCTGAGGTCTCCTCTATGGGCTCT ACCCACGTTCCTCTCGAGGACAGCGTCTCCGACTACGTCCGCTGGATGATTGGCCATCATCCCGGTTTTGTCCCT GCTTTCCTATCCTGCATGCGCCACGCGCCCCTCAACGAGCAGCACGAGGCCTGGCGTCGTCTCGCCACGAGGCCG CCGCGGTCCACTGCCGTCTTGCTCGCCGAGGACGATGAGCTCATCAGTCCCGCCATCTACGCCCGTGAAGGTCTG CCACTGGCTGGCGGACCTGATCGCGTTGTCTGGAAGGTCCTGCCAGGGACCCACGACTTCATCATGACCCATGTT GACCCCATTCTCGACGAGCTGGACTCGTTGTGGCAGATGAAGAAGCCGGCTTAG |
Transcript | >Ophcf2|00448 ATGGATCACTTCTCTCCTGCCACCGGCTTCGCTCTCCTCGCCGTCGCCGCGTCGCTGCTCCTCGTCACTTCGGCC GCCCGACGACGGAACCAGCGGGTGCTGCGCGGACCGCCTCGGCTGCAGGGTGGCGACGACAAGGCGGTTCAGCTC GTCTACCAGCCAGATTCGCTGCCTGGTGCGAGAGACGTCGATACCCCGTACGGCTGCGTCCGCGTCTACGAGTTT GGCCCCGAACATGGCCCCAAGGTGCTGCTCGTTCACGGCATCACGACGCCCTGTCTTCCCCTTGCGCCTCTGGCT CACGCCTTGGTCGATCGTGGATGTCGCGTCATGCTCTTTGACCTCTTTGGTCGAGGCTTTTCAGACGGTGTCGGC GACCTCCCTCACGATGCCCGTCTCTACGTCTCGCAGATGCTCTGTGTCGTCGCCTCCAGCCCTTTACCCTGGACA GGTCATGGCGCGCTCCGTCTCATCGGCTACTCCATGGGCGGTGCCATCGCCATTCACTTTGCCATCGCCTTTCCC CATCTCGTTGGCTCTCTGGTTCTGCTCGCCCCGGCTGGCCTCATCCGCTTCGATGCCTATACCTCGGTTGCTCGT CGTCTAGCCCTCGCCGGTGCCGTGCCCGAGTTTCTCCTCGCCGCCTACGCCGCCTTCCGTCTGCGCTCCCCTCTG TCCACGCATGCTCCCGCTTCGAGGCCGGCCCTTGCCGTGGCCGCCGCCGAGGCTGAGGTCTCCTCTATGGGCTCT ACCCACGTTCCTCTCGAGGACAGCGTCTCCGACTACGTCCGCTGGATGATTGGCCATCATCCCGGTTTTGTCCCT GCTTTCCTATCCTGCATGCGCCACGCGCCCCTCAACGAGCAGCACGAGGCCTGGCGTCGTCTCGCCACGAGGCCG CCGCGGTCCACTGCCGTCTTGCTCGCCGAGGACGATGAGCTCATCAGTCCCGCCATCTACGCCCGTGAAGGTCTG CCACTGGCTGGCGGACCTGATCGCGTTGTCTGGAAGGTCCTGCCAGGGACCCACGACTTCATCATGACCCATGTT GACCCCATTCTCGACGAGCTGGACTCGTTGTGGCAGATGAAGAAGCCGGCTTAG |
Gene | >Ophcf2|00448 ATGGATCACTTCTCTCCTGCCACCGGCTTCGCTCTCCTCGCCGTCGCCGCGTCGCTGCTCCTCGTCACTTCGGCC GCCCGACGACGGAACCAGCGGGTGCTGCGCGGACCGCCTCGGCTGCAGGGTGGCGACGACAAGGCGGTTCAGCTC GTCTACCAGCCAGATTCGCTGCCTGGTGCGAGAGACGTCGATACCCCGGTAAGGCTGGCCGGCCGGATCATTGAA AGGGAGATGGAAGCTGACCTGGCTGCAGTACGGCTGCGTCCGCGTCTACGAGTTTGGCCCCGAACATGGCCCCAA GGTGCTGCTCGTTCACGGCATCACGACGCCCTGTCTTCCCCTTGCGCCTCTGGCTCACGCCTTGGTCGATCGTGG ATGTCGCGTCATGCTCTTTGTGAGCTTTCCCCAACCCCTTCCATCTACCTCGTTCGCGTACTGACGTCGCCTTAG GACCTCTTTGGTCGAGGCTTTTCAGACGGTGTCGGCGACCTCCCTCACGATGCCCGTCTCTACGTCTCGCAGATG CTCTGTGTCGTCGCCTCCAGCCCTTTACCCTGGACAGGTCATGGCGCGCTCCGTCTCATCGGCTACTCCATGGGC GGTGCCATCGCCATTCACTTTGCCATCGCCTTTCCCCATCTCGTTGGCTCTCTGGTTCTGCTCGCCCCGGCTGGC CTCATCCGCTTCGATGCCTATACCTCGGTTGCTCGTCGTCTAGCCCTCGCCGGTGCCGTGCCCGAGTTTCTCCTC GCCGCCTACGCCGCCTTCCGTCTGCGCTCCCCTCTGTCCACGCATGCTCCCGCTTCGAGGCCGGCCCTTGCCGTG GCCGCCGCCGAGGCTGAGGTCTCCTCTATGGGCTCTACCCACGTTCCTCTCGAGGACAGCGTCTCCGACTACGTC CGCTGGATGATTGGCCATCATCCCGGTTTTGTCCCTGCTTTCCTATCCTGCATGCGCCACGCGCCCCTCAACGAG CAGCACGAGGCCTGGCGTCGTCTCGCCACGAGGCCGCCGCGGTCCACTGCCGTCTTGCTCGCCGAGGACGATGAG CTCATCAGTCCCGCCATCTACGCCCGTGAAGGTCTGCCACTGGCTGGCGGACCTGATCGCGTTGTCTGGAAGGTC CTGCCAGGGACCCACGACTTCATCATGACCCATGTTGACCCCATTCTCGACGAGCTGGACTCGTTGTGGCAGATG AAGAAGCCGGCTTAG |