Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00439
Gene name
Locationscaffold_01:1796413..1797573
Strand+
Gene length (bp)1160
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 2.4E-40 63 217

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 347 366 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00439
MRLLNFLLITTTVSAQTYSQCNPLNTAQCPPDAALAMSVNIDFRKGSVNSFVAAGTPSYGPEGVSFTVSRGGEAP
QLNSLFYIMFGRVEASVKAAPGAGIVSSLVLESDALDEIDVELLGSNGGEMQSNYFGKGNTATYNRGRFHAVAGT
QDRFITYTIDWTPDRIVWAADGNIVRVLSQSEAEPGQYPQTPMRLKMGAWAGGDPATNAEGTVSWARGPTDYSRG
PFTMLIRSVSVTDYSTGKEYRYRDQSGSASSIEAVGGAVNANRVRNPYPVSPVAGNAASRDGGPASVPIGGLARD
GSPAARTQTGWPWVAGAGPTGGPIPSGWHMTAEGKIMRDDSPASRPAPVLILLLLLPALAAAGLLLS*
Coding >Ophcf2|00439
ATGCGTCTCCTCAACTTCCTCCTCATCACCACCACCGTCTCAGCCCAGACCTACAGCCAATGCAATCCCCTCAAC
ACAGCCCAATGTCCCCCCGACGCCGCCCTCGCCATGTCCGTCAACATCGACTTCCGCAAAGGCAGCGTAAACTCC
TTCGTCGCCGCCGGGACGCCATCCTACGGTCCGGAAGGCGTCTCCTTTACCGTCTCCCGCGGCGGTGAAGCCCCT
CAGCTCAATTCCCTCTTCTACATCATGTTCGGCCGCGTCGAAGCCAGCGTAAAGGCCGCTCCGGGAGCCGGCATC
GTCTCCTCTCTGGTCCTCGAATCCGATGCCCTGGACGAGATTGACGTTGAGCTTCTGGGCTCTAACGGCGGCGAG
ATGCAATCGAACTACTTCGGGAAGGGCAATACGGCGACTTATAACCGTGGACGCTTCCACGCCGTGGCCGGCACG
CAGGATCGCTTCATCACCTACACCATCGATTGGACGCCAGACCGCATCGTCTGGGCCGCCGACGGAAACATCGTC
CGCGTCCTCTCCCAGTCAGAGGCCGAACCGGGACAATACCCACAGACGCCCATGCGTCTCAAGATGGGAGCCTGG
GCCGGCGGAGACCCGGCCACCAACGCCGAGGGCACCGTCTCGTGGGCCCGGGGTCCGACCGACTACAGCCGAGGC
CCCTTCACCATGCTCATCCGCTCCGTGTCCGTCACCGACTACTCTACCGGCAAGGAATACCGCTACCGGGATCAG
TCCGGCTCGGCCTCTTCCATCGAAGCCGTCGGAGGCGCCGTCAACGCCAACCGCGTCCGAAACCCCTACCCCGTC
TCGCCCGTCGCCGGCAACGCCGCCTCCCGCGACGGAGGTCCGGCCTCGGTCCCCATCGGAGGCCTCGCCCGTGAC
GGCAGCCCCGCCGCCCGTACCCAGACCGGCTGGCCCTGGGTGGCCGGCGCCGGTCCGACCGGAGGGCCCATCCCC
AGCGGTTGGCACATGACGGCTGAAGGCAAGATTATGCGCGACGACTCGCCTGCCTCTCGCCCAGCGCCCGTGCTG
ATATTGCTGCTTCTGTTACCCGCCCTCGCCGCAGCCGGCCTGCTGCTTTCGTAG
Transcript >Ophcf2|00439
ATGCGTCTCCTCAACTTCCTCCTCATCACCACCACCGTCTCAGCCCAGACCTACAGCCAATGCAATCCCCTCAAC
ACAGCCCAATGTCCCCCCGACGCCGCCCTCGCCATGTCCGTCAACATCGACTTCCGCAAAGGCAGCGTAAACTCC
TTCGTCGCCGCCGGGACGCCATCCTACGGTCCGGAAGGCGTCTCCTTTACCGTCTCCCGCGGCGGTGAAGCCCCT
CAGCTCAATTCCCTCTTCTACATCATGTTCGGCCGCGTCGAAGCCAGCGTAAAGGCCGCTCCGGGAGCCGGCATC
GTCTCCTCTCTGGTCCTCGAATCCGATGCCCTGGACGAGATTGACGTTGAGCTTCTGGGCTCTAACGGCGGCGAG
ATGCAATCGAACTACTTCGGGAAGGGCAATACGGCGACTTATAACCGTGGACGCTTCCACGCCGTGGCCGGCACG
CAGGATCGCTTCATCACCTACACCATCGATTGGACGCCAGACCGCATCGTCTGGGCCGCCGACGGAAACATCGTC
CGCGTCCTCTCCCAGTCAGAGGCCGAACCGGGACAATACCCACAGACGCCCATGCGTCTCAAGATGGGAGCCTGG
GCCGGCGGAGACCCGGCCACCAACGCCGAGGGCACCGTCTCGTGGGCCCGGGGTCCGACCGACTACAGCCGAGGC
CCCTTCACCATGCTCATCCGCTCCGTGTCCGTCACCGACTACTCTACCGGCAAGGAATACCGCTACCGGGATCAG
TCCGGCTCGGCCTCTTCCATCGAAGCCGTCGGAGGCGCCGTCAACGCCAACCGCGTCCGAAACCCCTACCCCGTC
TCGCCCGTCGCCGGCAACGCCGCCTCCCGCGACGGAGGTCCGGCCTCGGTCCCCATCGGAGGCCTCGCCCGTGAC
GGCAGCCCCGCCGCCCGTACCCAGACCGGCTGGCCCTGGGTGGCCGGCGCCGGTCCGACCGGAGGGCCCATCCCC
AGCGGTTGGCACATGACGGCTGAAGGCAAGATTATGCGCGACGACTCGCCTGCCTCTCGCCCAGCGCCCGTGCTG
ATATTGCTGCTTCTGTTACCCGCCCTCGCCGCAGCCGGCCTGCTGCTTTCGTAG
Gene >Ophcf2|00439
ATGCGTCTCCTCAACTTCCTCCTCATCACCACCACCGTCTCAGCCCAGACCTACAGCCAATGCAATCCCCTCAAC
AGTACGCAACCCAATCAACAAAAAGAAGAACAAGCCACGATGCTCACAAACCACCAGCAGCCCAATGTCCCCCCG
ACGCCGCCCTCGCCATGTCCGTCAACATCGACTTCCGCAAAGGCAGCGTAAACTCCTTCGTCGCCGCCGGGACGC
CATCCTACGGTCCGGAAGGCGTCTCCTTTACCGTCTCCCGCGGCGGTGAAGCCCCTCAGCTCAATTCCCTCTTCT
ACATCATGTTCGGCCGCGTCGAAGCCAGCGTAAAGGCCGCTCCGGGAGCCGGCATCGTCTCCTCTCTGGTCCTCG
AATCCGATGCCCTGGACGAGATTGACGTTGAGCTTCTGGGCTCTAACGGCGGCGAGATGCAATCGAACTACTTCG
GGAAGGGCAATACGGCGACTTATAACCGTGGACGCTTCCACGCCGTGGCCGGCACGCAGGATCGCTTCATCACCT
ACACCATCGATTGGACGCCAGACCGCATCGTCTGGGCCGCCGACGGAAACATCGTCCGCGTCCTCTCCCAGTCAG
AGGCCGAACCGGGACAATACCCACAGACGCCCATGCGTCTCAAGATGGGAGCCTGGGCCGGCGGAGACCCGGCCA
CCAACGCCGAGGGCACCGTCTCGTGGGCCCGGGGTCCGACCGACTACAGCCGAGGCCCCTTCACCATGCTCATCC
GCTCCGTGTCCGTCACCGACTACTCTACCGGCAAGGAATACCGCTACCGGGATCAGTCCGGCTCGGCCTCTTCCA
TCGAAGCCGTCGGAGGCGCCGTCAACGCCAACCGCGTCCGAAACCCCTACCCCGTCTCGCCCGTCGCCGGCAACG
CCGCCTCCCGCGACGGAGGTCCGGCCTCGGTCCCCATCGGAGGCCTCGCCCGTGACGGCAGCCCCGCCGCCCGTA
CCCAGACCGGCTGGCCCTGGGTGGCCGGCGCCGGTCCGACCGGAGGGCCCATCCCCAGCGGTTGGCACATGACGG
CTGAAGGCAAGATTATGCGCGACGACTCGCCTGCCTCTCGCCCAGCGCCCGTGCTGATATTGCTGCTTCTGTTAC
CCGCCCTCGCCGCAGCCGGCCTGCTGCTTTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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