Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00436
Gene name
Locationscaffold_01:1782496..1783406
Strand-
Gene length (bp)910
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 1.4E-21 134 213

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 144 166 22
2 189 206 17
3 227 249 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00436
MERTVTPARTDRLHRDDHDEDDDGDGDGDDREAIDGSPSGRAFSLSTGSHIDDILQVGRARAESRGQGDEWVRPN
KMSSPSIYRRRARDEPSSAGPVMVTDEGEGDAAGASSWWKRAMGRFQSVELDNNGSVARDHLALERTFLAWLRTS
LAFASIGVAVTQLFRLNTSLADDEGGRTDSLALRRMGKPLGATFLAISILTLLMGFRRYFHGQEWVMRGKFPASR
GTVVLVAGLAVAVMMVSLVVVVVIQPSEGLKREVLRLDL*
Coding >Ophcf2|00436
ATGGAGCGTACGGTGACTCCTGCGCGGACCGACAGGCTGCATCGCGACGACCATGACGAAGATGACGATGGCGAT
GGCGATGGCGATGACCGAGAGGCGATAGACGGCAGTCCCTCCGGTAGGGCCTTTTCGCTCTCGACGGGCTCGCAT
ATCGACGATATCTTGCAGGTTGGGCGGGCGCGGGCTGAGAGCAGGGGACAGGGTGACGAATGGGTTCGTCCGAAC
AAGATGTCTTCGCCGTCCATCTACCGACGAAGAGCGCGAGATGAGCCATCGTCGGCTGGACCGGTGATGGTGACG
GACGAGGGAGAAGGGGATGCTGCTGGCGCATCATCGTGGTGGAAGCGGGCCATGGGTAGGTTTCAGTCTGTCGAG
CTGGATAACAACGGGAGCGTGGCCCGAGATCACCTCGCGCTCGAGCGCACATTTCTAGCCTGGTTGCGAACCTCG
CTGGCCTTTGCATCCATCGGCGTGGCGGTGACGCAACTGTTTCGACTCAACACTTCGCTCGCGGACGATGAGGGC
GGGAGGACGGATTCTCTGGCGTTGAGACGGATGGGGAAGCCCTTGGGCGCTACCTTCCTGGCCATCAGTATCTTG
ACCTTGCTGATGGGGTTTCGGAGATACTTTCACGGACAGGAGTGGGTTATGCGCGGAAAGTTTCCTGCCAGTCGG
GGGACGGTCGTCTTGGTGGCGGGGTTGGCGGTGGCGGTCATGATGGTTTCTTTGGTGGTTGTCGTTGTCATTCAG
CCTTCTGAGGGGTTGAAGAGGGAGGTTTTGAGGCTGGATTTGTAG
Transcript >Ophcf2|00436
ATGGAGCGTACGGTGACTCCTGCGCGGACCGACAGGCTGCATCGCGACGACCATGACGAAGATGACGATGGCGAT
GGCGATGGCGATGACCGAGAGGCGATAGACGGCAGTCCCTCCGGTAGGGCCTTTTCGCTCTCGACGGGCTCGCAT
ATCGACGATATCTTGCAGGTTGGGCGGGCGCGGGCTGAGAGCAGGGGACAGGGTGACGAATGGGTTCGTCCGAAC
AAGATGTCTTCGCCGTCCATCTACCGACGAAGAGCGCGAGATGAGCCATCGTCGGCTGGACCGGTGATGGTGACG
GACGAGGGAGAAGGGGATGCTGCTGGCGCATCATCGTGGTGGAAGCGGGCCATGGGTAGGTTTCAGTCTGTCGAG
CTGGATAACAACGGGAGCGTGGCCCGAGATCACCTCGCGCTCGAGCGCACATTTCTAGCCTGGTTGCGAACCTCG
CTGGCCTTTGCATCCATCGGCGTGGCGGTGACGCAACTGTTTCGACTCAACACTTCGCTCGCGGACGATGAGGGC
GGGAGGACGGATTCTCTGGCGTTGAGACGGATGGGGAAGCCCTTGGGCGCTACCTTCCTGGCCATCAGTATCTTG
ACCTTGCTGATGGGGTTTCGGAGATACTTTCACGGACAGGAGTGGGTTATGCGCGGAAAGTTTCCTGCCAGTCGG
GGGACGGTCGTCTTGGTGGCGGGGTTGGCGGTGGCGGTCATGATGGTTTCTTTGGTGGTTGTCGTTGTCATTCAG
CCTTCTGAGGGGTTGAAGAGGGAGGTTTTGAGGCTGGATTTGTAG
Gene >Ophcf2|00436
ATGGAGCGTACGGTGACTCCTGCGCGGACCGACAGGCTGCATCGCGACGACCATGACGAAGATGACGATGGCGAT
GGCGATGGCGATGACCGAGAGGCGATAGACGGCAGTCCCTCCGGTAGGGCCTTTTCGCTCTCGACGGGCTCGCAT
ATCGACGATATCTTGCAGGTTGGGCGGGCGCGGGCTGAGAGCAGGGGACAGGGTGACGAATGGGTTCGTCCGAAC
AAGATGTCTTCGCCGTCCATCTACCGACGAAGAGCGCGAGATGAGCCATCGTCGGCTGGACCGGTGATGGTGACG
GACGAGGGAGAAGGGGATGCTGCTGGCGCATCATCGTGGTGGAAGCGGGCCATGGGTAGGTTTCAGTCTGTCGAG
CTGGATAACAACGGGAGCGTGGCCCGAGATCACCTCGCGCTCGGTACGTAACCGGGAACCCCCCCTCGTCTTGTC
TCGAGGCCGTGAAAGTGGAAGCACGGCCCGCTAACTACCGACTGCCCGTCTCTACTACGAACAACACACATACGA
ATATGTAGAGCGCACATTTCTAGCCTGGTTGCGAACCTCGCTGGCCTTTGCATCCATCGGCGTGGCGGTGACGCA
ACTGTTTCGACTCAACACTTCGCTCGCGGACGATGAGGGCGGGAGGACGGATTCTCTGGCGTTGAGACGGATGGG
GAAGCCCTTGGGCGCTACCTTCCTGGCCATCAGTATCTTGACCTTGCTGATGGGGTTTCGGAGATACTTTCACGG
ACAGGAGTGGGTTATGCGCGGAAAGTTTCCTGCCAGTCGGGGGACGGTCGTCTTGGTGGCGGGGTTGGCGGTGGC
GGTCATGATGGTTTCTTTGGTGGTTGTCGTTGTCATTCAGCCTTCTGAGGGGTTGAAGAGGGAGGTTTTGAGGCT
GGATTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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