Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00431
Gene name
Locationscaffold_01:1772531..1773429
Strand-
Gene length (bp)898
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09769 ApoO Apolipoprotein O 2.8E-40 81 209

GO

GO Term Description Terminal node
GO:0042407 cristae formation Yes
GO:0061617 MICOS complex Yes
GO:0005575 cellular_component No
GO:0071840 cellular component organization or biogenesis No
GO:0098800 inner mitochondrial membrane protein complex No
GO:0008150 biological_process No
GO:0061024 membrane organization No
GO:0098798 mitochondrial protein-containing complex No
GO:0032991 protein-containing complex No
GO:0006996 organelle organization No
GO:0007007 inner mitochondrial membrane organization No
GO:0007006 mitochondrial membrane organization No
GO:0009987 cellular process No
GO:0098796 membrane protein complex No
GO:0016043 cellular component organization No
GO:0007005 mitochondrion organization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 13 30 17
2 145 162 17
3 169 191 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00431
MAARVLLQRRSAASLAVLALGGMALTPATVRAEQPMDKLAEQQFDKRKPIYDDVHLSSQTNPLATPIALPPSQPL
LTDQDSRSSRPTPTDRLAVHIGRVRILLHRYAVAAEDKVNASMDAAFHLEQSFTDTIASLAPPRGSGERLMPGAI
YVVVAAMAGTIVTRNRNVLLRVSVPLALGIGAGWAVLPITMRNVADLSWRYEQRFPAVADAHVRLREEFEKGVHY
AKVHSEQGVRYVDERVTNAREAVEGWVKQGK*
Coding >Ophcf2|00431
ATGGCTGCAAGAGTGCTACTGCAACGGCGGTCCGCGGCATCTCTGGCCGTGCTCGCTCTCGGCGGTATGGCTCTG
ACCCCGGCCACGGTCCGCGCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGAGGAAGCCCATC
TATGACGATGTCCATCTCTCGTCCCAGACGAATCCCCTCGCAACGCCCATAGCCCTCCCGCCTTCACAGCCACTC
CTCACCGACCAAGACAGCCGCTCAAGCCGGCCGACGCCCACGGACCGACTGGCCGTTCATATCGGTCGCGTCCGC
ATCCTCCTGCACCGCTACGCCGTCGCAGCAGAAGACAAGGTCAACGCCTCCATGGACGCAGCCTTCCATCTAGAG
CAATCCTTCACCGACACCATCGCCTCGCTTGCGCCCCCGCGCGGAAGCGGCGAGCGCCTAATGCCCGGCGCCATC
TACGTCGTTGTCGCCGCCATGGCCGGCACCATCGTCACTCGCAACCGGAACGTGCTGCTGCGGGTTTCGGTGCCG
TTGGCGCTGGGGATAGGTGCCGGATGGGCCGTCTTGCCCATTACCATGCGCAACGTGGCGGATTTGTCGTGGCGG
TACGAGCAGCGCTTTCCGGCCGTGGCGGATGCTCATGTGCGGCTGCGCGAGGAATTCGAGAAAGGGGTTCACTAT
GCCAAGGTGCACAGCGAGCAGGGTGTACGATACGTTGATGAAAGGGTTACGAACGCGCGTGAGGCTGTCGAGGGC
TGGGTTAAGCAGGGTAAATAG
Transcript >Ophcf2|00431
ATGGCTGCAAGAGTGCTACTGCAACGGCGGTCCGCGGCATCTCTGGCCGTGCTCGCTCTCGGCGGTATGGCTCTG
ACCCCGGCCACGGTCCGCGCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGAGGAAGCCCATC
TATGACGATGTCCATCTCTCGTCCCAGACGAATCCCCTCGCAACGCCCATAGCCCTCCCGCCTTCACAGCCACTC
CTCACCGACCAAGACAGCCGCTCAAGCCGGCCGACGCCCACGGACCGACTGGCCGTTCATATCGGTCGCGTCCGC
ATCCTCCTGCACCGCTACGCCGTCGCAGCAGAAGACAAGGTCAACGCCTCCATGGACGCAGCCTTCCATCTAGAG
CAATCCTTCACCGACACCATCGCCTCGCTTGCGCCCCCGCGCGGAAGCGGCGAGCGCCTAATGCCCGGCGCCATC
TACGTCGTTGTCGCCGCCATGGCCGGCACCATCGTCACTCGCAACCGGAACGTGCTGCTGCGGGTTTCGGTGCCG
TTGGCGCTGGGGATAGGTGCCGGATGGGCCGTCTTGCCCATTACCATGCGCAACGTGGCGGATTTGTCGTGGCGG
TACGAGCAGCGCTTTCCGGCCGTGGCGGATGCTCATGTGCGGCTGCGCGAGGAATTCGAGAAAGGGGTTCACTAT
GCCAAGGTGCACAGCGAGCAGGGTGTACGATACGTTGATGAAAGGGTTACGAACGCGCGTGAGGCTGTCGAGGGC
TGGGTTAAGCAGGGTAAATAG
Gene >Ophcf2|00431
ATGGCTGCAAGAGTGCTACTGCAACGGGTCAGCCCCCCCCCCCCGGGAACTGCCTTCTAAACATCTCGATCATCA
CGGCTGACGGGGAGCTCTAAGCGGTCCGCGGCATCTCTGGCCGTGCTCGCTCTCGGCGGTATGGCTCTGACCCCG
GCCACGGTCCGCGCCGAGCAGCCGATGGACAAGCTGGCGGAGCAGCAGTTTGACAAGGTTGTTTGCCTCGTGTCC
ATCTCGGGTTCATCTTCCTGACGAGGTACATACATCGCAGAGGAAGCCCATCTATGACGATGTCCATCTCTCGTC
CCAGACGAATCCCCTCGCAACGCCCATAGCCCTCCCGCCTTCACAGCCACTCCTCACCGACCAAGACAGCCGCTC
AAGCCGGCCGACGCCCACGGACCGACTGGCCGTTCATATCGGTCGCGTCCGCATCCTCCTGCACCGCTACGCCGT
CGCAGCAGAAGACAAGGTCAACGCCTCCATGGACGCAGCCTTCCATCTAGAGCAATCCTTCACCGACACCATCGC
CTCGCTTGCGCCCCCGCGCGGAAGCGGCGAGCGCCTAATGCCCGGCGCCATCTACGTCGTTGTCGCCGCCATGGC
CGGCACCATCGTCACTCGCAACCGGAACGTGCTGCTGCGGGTTTCGGTGCCGTTGGCGCTGGGGATAGGTGCCGG
ATGGGCCGTCTTGCCCATTACCATGCGCAACGTGGCGGATTTGTCGTGGCGGTACGAGCAGCGCTTTCCGGCCGT
GGCGGATGCTCATGTGCGGCTGCGCGAGGAATTCGAGAAAGGGGTTCACTATGCCAAGGTGCACAGCGAGCAGGG
TGTACGATACGTTGATGAAAGGGTTACGAACGCGCGTGAGGCTGTCGAGGGCTGGGTTAAGCAGGGTAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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