Protein ID | Ophcf2|00423 |
Gene name | |
Location | scaffold_01:1752823..1754015 |
Strand | + |
Gene length (bp) | 1192 |
Transcript length (bp) | 1128 |
Coding sequence length (bp) | 1128 |
Protein length (aa) | 376 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03452 | Anp1 | Anp1 | 2.0E-107 | 77 | 341 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 40 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00423 MARPLGSVRLKKANPSTLALGLCLCIFILYFLVSPSTRSRPQAPQRPAPAEHHLSPPTQPYKKSNPRDKGPARPP PVTRYNLNHVTVTAKPIENRERILILTPMSRFYDEYWSNLLRLTYPHDLITLGFILPKTKEGNAATAALQQHIEQ TQKRGPVADRFNSIIILRQDFESAIISQDEGERHKMANQKARRSVMAKARNSLLFTTLGPATSWVLWLDADIVET PPTLIQDMAKHDKPLIVANCFQRFYNKDTNKMDERPYDYNSWQDSEIAANLAAKMGPDDILLEGYAEMATFRTLM AHIGTPDGDKDVTVPLDGVGGTALLVKADVHRDGAMFPPFPFYHLIETEGFAKMAKRLGWQSWGLPNLRVYHYNE * |
Coding | >Ophcf2|00423 ATGGCTCGACCCTTGGGGTCGGTCCGCCTCAAGAAGGCGAACCCGTCCACGCTTGCCCTCGGCCTCTGTCTCTGC ATCTTCATCCTCTACTTCCTCGTCTCGCCCTCGACCCGATCCCGTCCTCAAGCTCCTCAACGTCCCGCCCCTGCA GAGCATCATCTCTCGCCTCCGACGCAGCCCTACAAGAAGTCGAACCCGCGCGACAAGGGCCCCGCTCGCCCTCCG CCGGTGACGCGCTACAACCTCAACCATGTCACGGTGACGGCCAAGCCCATTGAGAACCGCGAGCGCATACTGATC CTCACCCCAATGTCACGCTTCTACGACGAATACTGGTCCAATCTGCTGCGCCTCACCTACCCTCACGACCTCATC ACTCTCGGCTTTATCCTCCCCAAGACAAAAGAGGGCAACGCCGCGACGGCAGCCCTACAGCAGCACATCGAGCAG ACGCAGAAACGCGGTCCCGTGGCCGATCGCTTCAACAGCATCATCATCCTCCGTCAAGACTTTGAATCCGCCATC ATCTCTCAAGACGAGGGCGAGCGTCACAAAATGGCCAACCAAAAGGCCCGTCGCTCGGTCATGGCCAAGGCCCGC AACTCGCTCCTCTTCACCACGCTCGGCCCCGCCACCTCGTGGGTCCTCTGGCTCGACGCCGACATCGTTGAGACG CCCCCGACGCTCATCCAGGACATGGCCAAGCACGACAAGCCCCTCATCGTGGCAAACTGCTTCCAGCGCTTCTAC AACAAGGACACCAACAAGATGGACGAGCGGCCCTACGACTACAACAGCTGGCAGGACAGCGAGATCGCCGCCAAC CTGGCCGCCAAGATGGGCCCCGACGACATCCTGCTCGAGGGCTACGCCGAGATGGCCACCTTTCGCACCCTCATG GCCCACATCGGCACCCCCGACGGCGACAAGGACGTGACGGTGCCCCTCGACGGCGTCGGCGGAACCGCCCTCCTC GTCAAGGCCGACGTCCACCGCGACGGCGCCATGTTCCCACCCTTTCCCTTCTATCACCTCATCGAGACCGAAGGC TTCGCCAAGATGGCCAAGCGCCTGGGCTGGCAATCCTGGGGCCTACCCAACCTCCGGGTGTACCACTACAACGAG TAA |
Transcript | >Ophcf2|00423 ATGGCTCGACCCTTGGGGTCGGTCCGCCTCAAGAAGGCGAACCCGTCCACGCTTGCCCTCGGCCTCTGTCTCTGC ATCTTCATCCTCTACTTCCTCGTCTCGCCCTCGACCCGATCCCGTCCTCAAGCTCCTCAACGTCCCGCCCCTGCA GAGCATCATCTCTCGCCTCCGACGCAGCCCTACAAGAAGTCGAACCCGCGCGACAAGGGCCCCGCTCGCCCTCCG CCGGTGACGCGCTACAACCTCAACCATGTCACGGTGACGGCCAAGCCCATTGAGAACCGCGAGCGCATACTGATC CTCACCCCAATGTCACGCTTCTACGACGAATACTGGTCCAATCTGCTGCGCCTCACCTACCCTCACGACCTCATC ACTCTCGGCTTTATCCTCCCCAAGACAAAAGAGGGCAACGCCGCGACGGCAGCCCTACAGCAGCACATCGAGCAG ACGCAGAAACGCGGTCCCGTGGCCGATCGCTTCAACAGCATCATCATCCTCCGTCAAGACTTTGAATCCGCCATC ATCTCTCAAGACGAGGGCGAGCGTCACAAAATGGCCAACCAAAAGGCCCGTCGCTCGGTCATGGCCAAGGCCCGC AACTCGCTCCTCTTCACCACGCTCGGCCCCGCCACCTCGTGGGTCCTCTGGCTCGACGCCGACATCGTTGAGACG CCCCCGACGCTCATCCAGGACATGGCCAAGCACGACAAGCCCCTCATCGTGGCAAACTGCTTCCAGCGCTTCTAC AACAAGGACACCAACAAGATGGACGAGCGGCCCTACGACTACAACAGCTGGCAGGACAGCGAGATCGCCGCCAAC CTGGCCGCCAAGATGGGCCCCGACGACATCCTGCTCGAGGGCTACGCCGAGATGGCCACCTTTCGCACCCTCATG GCCCACATCGGCACCCCCGACGGCGACAAGGACGTGACGGTGCCCCTCGACGGCGTCGGCGGAACCGCCCTCCTC GTCAAGGCCGACGTCCACCGCGACGGCGCCATGTTCCCACCCTTTCCCTTCTATCACCTCATCGAGACCGAAGGC TTCGCCAAGATGGCCAAGCGCCTGGGCTGGCAATCCTGGGGCCTACCCAACCTCCGGGTGTACCACTACAACGAG TAA |
Gene | >Ophcf2|00423 ATGGCTCGACCCTTGGGGTCGGTCCGCCTCAAGAAGGCGAACCCGTCCACGCTTGCCCTCGGCCTCTGTCTCTGC ATCTTCATCCTCTACTTCCTCGTCTCGCCCTCGACCCGATCCCGTCCTCAAGCTCCTCAACGTCCCGCCCCTGCA GAGCATCATCTCTCGCCTCCGACGCAGCCCTACAAGAAGTCGAACCCGCGCGACAAGGGCCCCGCTCGCCCTCCG CCGGTGACGCGCTACAACCTCAACCATGTCACGGTGACGGCCAAGCCCATTGAGAACCGCGAGCGCATACTGATC CTCACCCCAATGTCACGCTTCTACGACGAATACTGGTCCAATCTGCTGCGCCTCACCTACCCTCACGACCTCATC ACTCTCGGCTTTATCCTCCCCAAGACAAAAGAGGGCAACGCCGCGACGGCAGCCCTACAGCAGCACATCGAGCAG ACGCAGAAACGCGGTCCCGTGGCCGATCGCTTCAACAGCATCATCATCCTCCGTCAAGACTTTGAATCCGCCATC ATCTCTCAAGACGAGGGCGAGCGTCACAAAATGGCCAACCAAAAGGCCCGTCGCTCGGTCATGGCCAAGGCCCGC AACTCGCTCCTCTTCACCACGCTCGGCCCCGCCACCTCGTGGGTCCTCTGGCTCGACGCCGACATCGTTGAGACG CCCCCGACGCTCATCCAGGACATGGCCAAGCACGACAAGCCCCTCATCGTGGCAAACTGCTTCCAGCGCTTCTAC AACAAGGACACCAACAAGATGGACGAGCGGCCCTACGACTACAACAGCTGGCAGGACAGCGAGATCGCCGCCAAC CTGGCCGCCAAGATGGGCCCCGACGACATCCTGCTCGAGGGCTACGCCGAGATGGCCACCTTTCGCACCCTCATG GCCCACATCGGCACCCCCGACGGCGACAAGGACGTGACGGTGCCCCTCGACGGCGTCGGCGGAACCGCCCTCCTC GTCAAGGCCGACGTCCACCGCGACGGCGCCATGTTCCCACCCTTTCCCTTCTATCACCTCATCGAGACCGAAGGC TTCGCCAAGATGGCCAAGCGCCTGGGCTGGCAATCCTGGGGCCTACCCAACCTCCGGGTAAGCCGCTCTCCTCTT GAAGCGACGAGACCGACGCTGAGCTGACGGCGACCTGATTCGCCAGGTGTACCACTACAACGAGTAA |