Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00417
Gene name
Locationscaffold_01:1740516..1740969
Strand+
Gene length (bp)453
Transcript length (bp)453
Coding sequence length (bp)453
Protein length (aa) 151

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05207 zf-CSL CSL zinc finger 1.9E-17 81 140
PF00226 DnaJ DnaJ domain 7.8E-10 6 58

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00417
MAQDPSQLIKQAYRRALLRNHPDKTAGARSTQTQIYTVDQISHAFAVLASPTRRAEYDASFRLAVPAPAPGPTRF
QTGVETVDLDDLSFDDDRGRWYHPCRCGNDRGYSFDEADLADAADDGLLMVGCLDCSLWLSVHFAAVHDDELRPE
*
Coding >Ophcf2|00417
ATGGCCCAAGATCCCTCACAGCTGATCAAGCAAGCCTATCGCCGCGCTCTTCTCCGCAACCACCCCGACAAGACA
GCCGGCGCCCGCTCTACTCAGACACAAATATACACGGTCGATCAGATAAGCCACGCCTTCGCCGTTCTCGCCTCG
CCCACCCGTCGCGCCGAATATGACGCCTCCTTCCGCCTCGCCGTACCCGCTCCCGCTCCCGGCCCGACCCGCTTT
CAGACCGGCGTCGAGACGGTCGACCTCGATGACCTGTCCTTCGACGACGACCGAGGACGCTGGTACCACCCCTGT
CGCTGCGGCAACGACAGGGGTTACTCCTTCGACGAGGCTGACCTGGCTGACGCCGCCGACGACGGCTTGCTCATG
GTTGGCTGCCTCGACTGCAGCCTCTGGCTAAGCGTGCACTTTGCCGCCGTCCATGACGACGAGCTGCGTCCGGAA
TGA
Transcript >Ophcf2|00417
ATGGCCCAAGATCCCTCACAGCTGATCAAGCAAGCCTATCGCCGCGCTCTTCTCCGCAACCACCCCGACAAGACA
GCCGGCGCCCGCTCTACTCAGACACAAATATACACGGTCGATCAGATAAGCCACGCCTTCGCCGTTCTCGCCTCG
CCCACCCGTCGCGCCGAATATGACGCCTCCTTCCGCCTCGCCGTACCCGCTCCCGCTCCCGGCCCGACCCGCTTT
CAGACCGGCGTCGAGACGGTCGACCTCGATGACCTGTCCTTCGACGACGACCGAGGACGCTGGTACCACCCCTGT
CGCTGCGGCAACGACAGGGGTTACTCCTTCGACGAGGCTGACCTGGCTGACGCCGCCGACGACGGCTTGCTCATG
GTTGGCTGCCTCGACTGCAGCCTCTGGCTAAGCGTGCACTTTGCCGCCGTCCATGACGACGAGCTGCGTCCGGAA
TGA
Gene >Ophcf2|00417
ATGGCCCAAGATCCCTCACAGCTGATCAAGCAAGCCTATCGCCGCGCTCTTCTCCGCAACCACCCCGACAAGACA
GCCGGCGCCCGCTCTACTCAGACACAAATATACACGGTCGATCAGATAAGCCACGCCTTCGCCGTTCTCGCCTCG
CCCACCCGTCGCGCCGAATATGACGCCTCCTTCCGCCTCGCCGTACCCGCTCCCGCTCCCGGCCCGACCCGCTTT
CAGACCGGCGTCGAGACGGTCGACCTCGATGACCTGTCCTTCGACGACGACCGAGGACGCTGGTACCACCCCTGT
CGCTGCGGCAACGACAGGGGTTACTCCTTCGACGAGGCTGACCTGGCTGACGCCGCCGACGACGGCTTGCTCATG
GTTGGCTGCCTCGACTGCAGCCTCTGGCTAAGCGTGCACTTTGCCGCCGTCCATGACGACGAGCTGCGTCCGGAA
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail