Protein ID | Ophcf2|00407 |
Gene name | |
Location | scaffold_01:1704368..1705784 |
Strand | + |
Gene length (bp) | 1416 |
Transcript length (bp) | 1416 |
Coding sequence length (bp) | 1416 |
Protein length (aa) | 472 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 3.6E-10 | 79 | 231 |
PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 2.3E-09 | 99 | 215 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 35 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 85.91 | 49.40 | 122.42 |
Alive | In ants, during behavior modification | 120.16 | 64.97 | 175.35 |
Dead | In ants, recently dead | 81.36 | 46.60 | 116.11 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.079483 | no |
Alive | Dead | 0.015688 | yes |
Dead | Fungus | 0.812316 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00407 MEIPTANLLSSTSHAVPGQLLVTELFFQVPLDYADESAGTIILFARRATKRERPVFPPDPSSSSDDDDEKDGPSP KPYMVYLEGGPGFGNREPQDHPLTRAAIARGYQMLYIDHRGVGLSTPVSADMLARLGSADAQARYLRLMRQDNTV RDCEAVRQYLTQGWSAAKAPWSIFGQSYGGFVALSYLSMYPQGLREVFLTGGLAPVGQPIERVYEATFARTAHRN RQYFAKFPEDTQVLRRIVDFIREQGGAVPLPAGGILTVPRLMTLGIAFGGHGGFDGVHSILLHLVTSLDQFGFFT RAALQPLETFTSFDTNVIYAILHEAIYCDGPGKASDWAAYRVGKALKPFDWLNPGRDDVDSWYLAGEMIFPFHFE TYPELISLRPVAEELAAATDWPRLYDEQQLRKNTVPVYAMSYIDDMYVDNDLARETAKLVKGTKVAETNLMYHSA LRAKSEEVLQALFGLRDDVLD* |
Coding | >Ophcf2|00407 ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA |
Transcript | >Ophcf2|00407 ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA |
Gene | >Ophcf2|00407 ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA |