Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00407
Gene name
Locationscaffold_01:1704368..1705784
Strand+
Gene length (bp)1416
Transcript length (bp)1416
Coding sequence length (bp)1416
Protein length (aa) 472

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 3.6E-10 79 231
PF12146 Hydrolase_4 Serine aminopeptidase, S33 2.3E-09 99 215

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 85.91 49.40 122.42
Alive In ants, during behavior modification 120.16 64.97 175.35
Dead In ants, recently dead 81.36 46.60 116.11

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.079483 no
Alive Dead 0.015688 yes
Dead Fungus 0.812316 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00407
MEIPTANLLSSTSHAVPGQLLVTELFFQVPLDYADESAGTIILFARRATKRERPVFPPDPSSSSDDDDEKDGPSP
KPYMVYLEGGPGFGNREPQDHPLTRAAIARGYQMLYIDHRGVGLSTPVSADMLARLGSADAQARYLRLMRQDNTV
RDCEAVRQYLTQGWSAAKAPWSIFGQSYGGFVALSYLSMYPQGLREVFLTGGLAPVGQPIERVYEATFARTAHRN
RQYFAKFPEDTQVLRRIVDFIREQGGAVPLPAGGILTVPRLMTLGIAFGGHGGFDGVHSILLHLVTSLDQFGFFT
RAALQPLETFTSFDTNVIYAILHEAIYCDGPGKASDWAAYRVGKALKPFDWLNPGRDDVDSWYLAGEMIFPFHFE
TYPELISLRPVAEELAAATDWPRLYDEQQLRKNTVPVYAMSYIDDMYVDNDLARETAKLVKGTKVAETNLMYHSA
LRAKSEEVLQALFGLRDDVLD*
Coding >Ophcf2|00407
ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC
TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG
CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG
AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC
GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT
GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT
CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA
CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC
GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC
CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA
GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC
CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC
CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC
ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC
TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG
ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC
GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC
GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT
CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA
Transcript >Ophcf2|00407
ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC
TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG
CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG
AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC
GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT
GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT
CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA
CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC
GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC
CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA
GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC
CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC
CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC
ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC
TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG
ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC
GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC
GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT
CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA
Gene >Ophcf2|00407
ATGGAGATCCCAACGGCCAACCTGCTCAGCAGCACCAGCCACGCCGTCCCCGGCCAGCTGCTCGTTACCGAACTC
TTCTTCCAGGTGCCTCTCGACTACGCCGACGAGTCAGCCGGCACAATCATTCTCTTCGCCCGCCGCGCCACAAAG
CGTGAACGACCCGTCTTCCCCCCCGATCCGTCTTCGTCCTCGGATGACGACGATGAAAAGGATGGGCCCTCGCCG
AAGCCGTACATGGTCTACCTCGAGGGCGGACCGGGGTTCGGGAATCGCGAACCTCAGGATCATCCTCTTACTCGC
GCCGCCATCGCCCGAGGCTACCAGATGCTCTACATTGATCATCGCGGCGTCGGCCTCAGCACCCCCGTTTCGGCT
GATATGCTCGCCCGTCTCGGCTCTGCAGACGCCCAAGCTCGCTACCTGCGCCTCATGCGTCAGGATAACACCGTT
CGCGACTGTGAGGCCGTCCGTCAATATCTCACTCAAGGCTGGTCCGCTGCCAAGGCTCCCTGGTCCATCTTTGGA
CAGTCTTACGGCGGCTTCGTTGCTCTGTCCTACCTATCCATGTACCCGCAAGGTCTTCGTGAGGTCTTCCTCACC
GGTGGCCTCGCCCCCGTCGGCCAGCCAATCGAGCGCGTCTACGAGGCAACTTTTGCCAGGACGGCTCACCGCAAC
CGCCAGTATTTCGCAAAGTTTCCCGAGGACACCCAAGTGTTGCGTCGCATTGTCGACTTCATCCGCGAACAAGGA
GGAGCCGTGCCTCTTCCGGCCGGTGGCATTTTGACGGTACCCCGTCTGATGACGCTCGGCATCGCATTTGGAGGC
CACGGCGGCTTCGACGGAGTTCACTCTATACTCCTTCACCTCGTGACATCCCTCGACCAGTTTGGCTTCTTCACC
CGCGCCGCCCTCCAGCCCCTCGAGACCTTTACCTCGTTCGATACCAACGTCATCTATGCCATTCTGCACGAAGCC
ATCTACTGTGACGGTCCTGGAAAGGCCTCTGACTGGGCCGCCTATCGCGTAGGAAAAGCCCTCAAACCCTTTGAC
TGGCTCAACCCGGGCCGTGACGACGTCGACTCCTGGTACCTGGCTGGCGAGATGATATTTCCTTTCCACTTCGAG
ACGTACCCGGAGCTCATCTCTTTGCGGCCCGTGGCAGAGGAGCTGGCCGCCGCCACCGACTGGCCACGTCTGTAC
GACGAGCAGCAGCTGCGCAAAAACACCGTTCCCGTCTACGCCATGTCGTATATCGACGACATGTACGTCGACAAC
GACCTCGCCAGGGAGACGGCAAAGCTCGTCAAGGGAACAAAGGTGGCGGAGACGAACCTCATGTACCACTCTGCT
CTGCGGGCCAAATCGGAGGAGGTACTGCAGGCCCTGTTCGGCCTGAGAGATGACGTCCTAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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