Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00395
Gene name
Locationscaffold_01:1669634..1670936
Strand+
Gene length (bp)1302
Transcript length (bp)999
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 16 38 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00395
MAWTDSFWAVARDERVILLSMGLAAFGLVSAMMTGLTLIRDANEIAATEPKTQYITQDTEDALQLETLEKLLKHP
SYPIQEVATKILCDRAMNDSDTTTYLLYGITRPNYEERMQCLRALALLTTQTIGVDGLSKLNNARAMSALVRSLE
LSLQDVELPDLSNSHWDEYYLRDMAERFCLMFVQELVNKYGAEPLIKAQFVERWLVKQRWGTTAEERRRRFAEYM
NSKSNRLVDIVSSIKHLKRGLRALRKVGLIEETHPPRQMARSLPDLGIEDEVGERLRRAREHNDEERRLRRQHRE
AMRFLVVVCQLIKDRSSLNREEKGGAPVPAIL*
Coding >Ophcf2|00395
ATGGCCTGGACGGACAGCTTCTGGGCCGTGGCCCGCGATGAGCGCGTCATCTTACTGAGCATGGGCCTGGCCGCG
TTCGGCCTCGTCAGCGCAATGATGACAGGCCTCACCCTCATCCGCGACGCCAACGAGATTGCGGCCACGGAGCCA
AAGACGCAGTACATTACGCAGGACACCGAAGACGCCCTGCAGCTGGAGACGCTGGAGAAGCTTCTCAAGCACCCC
AGCTATCCCATTCAAGAGGTCGCCACCAAGATCCTGTGCGATAGGGCCATGAACGACTCCGACACGACGACGTAC
CTGCTCTACGGCATCACGCGGCCCAATTATGAAGAGCGCATGCAGTGTCTCCGGGCCCTGGCCCTTCTGACGACG
CAAACAATAGGCGTGGACGGGCTGTCGAAGCTGAACAACGCGAGGGCCATGTCGGCGTTGGTGAGATCCCTGGAG
CTGAGCCTCCAGGATGTCGAGCTCCCGGACCTCAGCAACAGTCACTGGGACGAGTATTACCTCCGCGACATGGCC
GAGAGGTTCTGCCTCATGTTCGTGCAGGAGCTGGTCAACAAGTACGGGGCAGAGCCACTCATCAAGGCTCAGTTT
GTCGAACGCTGGCTCGTCAAGCAGAGGTGGGGAACCACGGCCGAGGAACGTCGGCGCAGGTTTGCCGAATACATG
AACTCGAAGAGCAACCGCCTCGTCGATATCGTGAGCAGTATCAAGCATCTGAAGCGCGGTCTTCGAGCTCTTAGG
AAGGTGGGCTTGATCGAAGAGACGCATCCTCCACGACAGATGGCTCGGAGCCTTCCGGATCTCGGCATCGAGGAT
GAGGTGGGGGAGCGGCTACGCCGTGCAAGAGAGCACAATGACGAGGAACGAAGATTGCGACGCCAACATCGCGAA
GCCATGCGCTTCCTGGTCGTAGTTTGTCAACTCATCAAGGATCGATCGAGTCTCAATCGCGAGGAAAAAGGCGGC
GCACCGGTTCCTGCTATTCTGTAG
Transcript >Ophcf2|00395
ATGGCCTGGACGGACAGCTTCTGGGCCGTGGCCCGCGATGAGCGCGTCATCTTACTGAGCATGGGCCTGGCCGCG
TTCGGCCTCGTCAGCGCAATGATGACAGGCCTCACCCTCATCCGCGACGCCAACGAGATTGCGGCCACGGAGCCA
AAGACGCAGTACATTACGCAGGACACCGAAGACGCCCTGCAGCTGGAGACGCTGGAGAAGCTTCTCAAGCACCCC
AGCTATCCCATTCAAGAGGTCGCCACCAAGATCCTGTGCGATAGGGCCATGAACGACTCCGACACGACGACGTAC
CTGCTCTACGGCATCACGCGGCCCAATTATGAAGAGCGCATGCAGTGTCTCCGGGCCCTGGCCCTTCTGACGACG
CAAACAATAGGCGTGGACGGGCTGTCGAAGCTGAACAACGCGAGGGCCATGTCGGCGTTGGTGAGATCCCTGGAG
CTGAGCCTCCAGGATGTCGAGCTCCCGGACCTCAGCAACAGTCACTGGGACGAGTATTACCTCCGCGACATGGCC
GAGAGGTTCTGCCTCATGTTCGTGCAGGAGCTGGTCAACAAGTACGGGGCAGAGCCACTCATCAAGGCTCAGTTT
GTCGAACGCTGGCTCGTCAAGCAGAGGTGGGGAACCACGGCCGAGGAACGTCGGCGCAGGTTTGCCGAATACATG
AACTCGAAGAGCAACCGCCTCGTCGATATCGTGAGCAGTATCAAGCATCTGAAGCGCGGTCTTCGAGCTCTTAGG
AAGGTGGGCTTGATCGAAGAGACGCATCCTCCACGACAGATGGCTCGGAGCCTTCCGGATCTCGGCATCGAGGAT
GAGGTGGGGGAGCGGCTACGCCGTGCAAGAGAGCACAATGACGAGGAACGAAGATTGCGACGCCAACATCGCGAA
GCCATGCGCTTCCTGGTCGTAGTTTGTCAACTCATCAAGGATCGATCGAGTCTCAATCGCGAGGAAAAAGGCGGC
GCACCGGTTCCTGCTATTCTGTAG
Gene >Ophcf2|00395
ATGGCCTGGACGGACAGCTTCTGGGCCGTGGCCCGCGATGAGCGCGTCATCTTACTGAGCATGGGCCTGGCCGCG
TTCGGCCTCGTCAGCGCAATGATGACAGGCCTCACCCTCATCCGCGACGCCAACGAGATTGCGGCCACGGAGCCA
AAGACGCAGTACATTACGCAGGACACCGAAGACGCCCTGCAGCTGGAGACGCTGGAGAAGCTTCTCAAGCACCCC
AGCTATCCCATTCAAGAGGTCGCCACCAAGATCCTGTGCGATAGGGCCATGAACGACTCCGACACGACGACGTAC
CTGCTCTACGGCATCACGCGGCCCAATTATGAAGAGCGCATGCAGTGTCTCCGGGCCCTGGCCCTTCTGACGACG
CAAACAATAGGTGACGACGCCCGCTCCTCGGCCTTTGTCGAATTACCGGCTGACTGCGGAACGGTTCCTAGGCGT
GGACGGGCTGTCGAAGCTGAACAACGCGAGGGCCATGTCGGCGTTGGTGAGATCCCTGGAGCTGAGCCTCCAGGA
TGTCGAGCTCCCGGACCTCAGCAACAGTCACTGGGACGAGTATTACCTCCGCGACATGGCCGAGAGGTTCTGCCT
CATGTTCGTGCAGGAGCTGGTCAACAAGTACGGGGCAGAGCCACTCATCAAGGCTCAGTTTGTCGAACGCTGGCT
CGTCAAGCAGAGGTGGGGAACCACGGCCGAGGAACGTCGGCGCAGGTTTGCCGAATACATGAACTCGAAGAGCAA
CCGCCTCGTCGATATCGTGAGCAGTATCAAGCATCTGAAGCGCGGTCTTCGAGCTCTTAGGAAGGTGGGCTTGAT
CGAAGAGACGCATCCTCCACGACAGATGGCTCGGAGCCTTCCGGATCTCGGCATCGAGGATGAGGTGGGGGAGCG
GCTACGCCGTGCAAGAGAGCACAATGACGAGGAACGAAGATTGCGACGCCAACATCGCGAAGCCATGGTCCTGAA
TGACGGAACGAGACCGCTCGGTCGACAAGACATAATCGAACGAGACCATGGCTCCCCGGCCTGAACCCCTAGGGG
TGCGCACTCGGCAAAGAGCTGCTGGCTCTTTACGGTGCCTGTGTGCCTGGGACGATGGAAGGCAGGCGACCGACC
CTGCCGGAAACAGCGCTTCCTGGTCGTAGGTGGGTGACTTTTTTTTTCGCGGTGAGACCGTGTGAGAGGAGAGGG
CTGACCAGGTTAGCAGTATGCGTAGTTTGTCAACTCATCAAGGATCGATCGAGTCTCAATCGCGAGGAAAAAGGC
GGCGCACCGGTTCCTGCTATTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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