Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00386
Gene name
Locationscaffold_01:1644600..1646080
Strand-
Gene length (bp)1480
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 53 75 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00386
MDIFRSSLFGFRAGRSSYYKRSPRNGFMQRAYRRLRRILRDLVRYAKRHPWKVFLLVIMPLVTGGALSALLARFG
LRMPPHLERLLGIASHAASGDGIGLVSDAVRFASDQGLASHRWDRPYRSDGPGWADSFKGFFAKDYF*
Coding >Ophcf2|00386
ATGGATATTTTCCGCTCCTCTCTCTTCGGCTTCCGAGCCGGCCGTTCATCCTACTACAAGCGCTCGCCGCGCAAT
GGCTTCATGCAACGCGCCTATCGTCGCCTCCGCCGTATCCTCCGCGACCTCGTCCGCTACGCCAAGCGCCACCCT
TGGAAGGTCTTTCTCCTCGTCATAATGCCCCTCGTCACAGGCGGCGCTCTCTCCGCCCTGCTCGCCCGATTCGGT
CTCCGCATGCCTCCCCATCTCGAGCGCCTCCTCGGCATCGCCTCTCACGCCGCCTCCGGAGACGGCATCGGCCTC
GTCTCCGATGCTGTTCGCTTCGCCTCCGACCAGGGTTTGGCTTCACATCGTTGGGACCGTCCCTATCGCTCCGAC
GGTCCCGGTTGGGCCGATAGCTTCAAGGGCTTCTTCGCCAAAGACTACTTTTAG
Transcript >Ophcf2|00386
ATGGATATTTTCCGCTCCTCTCTCTTCGGCTTCCGAGCCGGCCGTTCATCCTACTACAAGCGCTCGCCGCGCAAT
GGCTTCATGCAACGCGCCTATCGTCGCCTCCGCCGTATCCTCCGCGACCTCGTCCGCTACGCCAAGCGCCACCCT
TGGAAGGTCTTTCTCCTCGTCATAATGCCCCTCGTCACAGGCGGCGCTCTCTCCGCCCTGCTCGCCCGATTCGGT
CTCCGCATGCCTCCCCATCTCGAGCGCCTCCTCGGCATCGCCTCTCACGCCGCCTCCGGAGACGGCATCGGCCTC
GTCTCCGATGCTGTTCGCTTCGCCTCCGACCAGGGTTTGGCTTCACATCGTTGGGACCGTCCCTATCGCTCCGAC
GGTCCCGGTTGGGCCGATAGCTTCAAGGGCTTCTTCGCCAAAGACTACTTTTAG
Gene >Ophcf2|00386
ATGGATATTTTGTAAGCTTTTTATACACTAATAAGCGTGAGAGTTACAACAACCAAGAAAGCAATTTGGCGCAGT
GGAAGCGCGCCGGGCTCATAACCCGGAGGTCCTACGATCGAAACGTAGAATTGCTAAAATTTTTACATTTTTTTT
CATTGCCGGCATCTCCTTATCACCTTCATCATCAACCCATCATCTTTCGTCTTCTGCAGCATGCAGTTTTCTCAT
GACACTTTTCCCGCCTTCATCTTTGTAGTGAATCCTCTCTATTCGATCGTGGACAAGCACAGCATGACGCAACTC
GCCTCTCACAGTACCTGCCTCTACGCACACTCCAAGGGTTCAGACCCCCGTCTATATGGGGTCTAGGGTCCAACG
GTGCATTCTCTAGGGTAGGACCCGGTCATGGCCGAACCTCACCGCATCACTCCGTCGGGCCGGGCCCATCCTACC
ATCATCAGCGATGCATGCAGGCAGCCTCTATCACGCGCATACATACACCCCATACTTCGTACATGGCCATCTATA
TCTGTACGAATTCATACGAATGCATACATACGCCCACTCCCTTACATACATGATACATGATACACCAACACAGTA
TCCCTACCACATATTCGTACATACATACGAAATAGATACGCTACCCATCCATCAATCACACCCACTGTCCAGTCC
AGCCCCGTCCTTTTCCACCCTCCTCACCATCTCCTCCTCCCCATCTCCCATCTCTCCCTCCTCCCCCCCCAAAAC
AACACTCGCAATGCCCTTCTTCCCCGACAGCTTCCCCCCGGAAGCTACCCTACGGCCCACCGCCGCAAATCCCGC
CCCGATCGCCCCCTCCACACCACCTCCTCCGACCATCGTCGGCACCGATCCCGCTCCCGCTCCGAGTCCCGCTCC
GGTAAACGCTCGGCATCCTCCATATTCGGCCTCGGGAACGCCAGCCGCGGCTCCCTCTTCGGCCTCGGGAATGCC
AGCCGCTCCTCTCTCTTCGGCTTCCGAGGTGCGTCTCCCTGACCATCATATATATACCCGGGGCCCGTGAAACGA
CTACCTACCTACACTACCTGCCATATACTACTACCTAGCCGGCCGTTCATCCTACTACAAGCGCTCGCCGCGCAA
TGGCTTCATGCAACGCGCCTATCGTCGCCTCCGCCGTATCCTCCGCGACCTCGTCCGCTACGCCAAGCGCCACCC
TTGGAAGGTCTTTCTCCTCGTCATAATGCCCCTCGTCACAGGCGGCGCTCTCTCCGCCCTGCTCGCCCGATTCGG
TCTCCGCATGCCTCCCCATCTCGAGCGCCTCCTCGGCATCGCCTCTCACGCCGCCTCCGGAGACGGCATCGGCCT
CGTCTCCGATGCTGTTCGCTTCGCCTCCGACCAGGGTTTGGCTTCACATCGTTGGGACCGTCCCTATCGCTCCGA
CGGTCCCGGTTGGGCCGATAGCTTCAAGGGCTTCTTCGCCAAAGACTACTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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