Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00358
Gene name
Locationscaffold_01:1558757..1559680
Strand-
Gene length (bp)923
Transcript length (bp)864
Coding sequence length (bp)864
Protein length (aa) 288

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 6.1E-43 65 269

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 111 130 19
2 143 162 19
3 172 191 19
4 231 248 17
5 252 274 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00358
MFCRLPLQAANHAPEKNSRAPESVSQEISSQTSAGSFWPLAPERSRLVGHFSDDVRSSLFAEAQLVLLTFCTGIQ
DVTTFLDYHCFASNQTGNTVFLCIALIISQIEGDTFVTANVGMSLGVFLAAGWLTGQLSHVIGGRKRWWLVSCNL
LQTALVFTVAGIQYRYGSSDRGPVALGVIALLAFAAGGQVVQSRSLRITEISTAMATAAWVDLVMDGKLFVLHNR
PRNRRLAFLIALAVGSLVGAAVYRQLGSAAAIAISAAGKLLVTILFLFSPAEIRRRGGAAEV*
Coding >Ophcf2|00358
ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAATCACGCCCCAGAGAAGAACTCGAGGGCTCCCGAGTCCGTATCC
CAGGAGATCTCGTCCCAAACCAGCGCCGGCTCCTTCTGGCCCCTTGCGCCGGAAAGGAGCCGGCTCGTCGGTCAC
TTTTCCGACGACGTCCGCTCCTCGCTCTTCGCCGAGGCACAGCTTGTGCTGCTGACCTTTTGCACGGGAATTCAA
GACGTCACCACCTTTCTAGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCC
CTCATCATCTCCCAGATCGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCC
GCGGGATGGTTGACGGGCCAACTGAGCCACGTCATCGGTGGACGGAAGCGTTGGTGGCTGGTCTCGTGCAACCTC
CTTCAGACTGCCCTGGTCTTCACCGTAGCCGGGATCCAGTACCGCTACGGCAGCTCCGATCGCGGACCCGTTGCC
CTCGGCGTCATAGCCCTGTTGGCCTTTGCCGCGGGCGGGCAGGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAG
ATCAGCACCGCCATGGCGACGGCGGCTTGGGTTGACCTCGTCATGGACGGAAAGCTGTTTGTGCTGCACAACCGA
CCGAGGAATCGTCGCCTCGCCTTCCTGATCGCCCTGGCCGTCGGATCTCTGGTTGGCGCCGCCGTCTACCGCCAG
CTGGGCTCGGCGGCCGCCATTGCGATATCCGCGGCCGGAAAACTGCTCGTCACGATCCTCTTCCTGTTCTCGCCC
GCTGAGATCCGGCGACGGGGGGGGGCAGCAGAGGTGTAA
Transcript >Ophcf2|00358
ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAATCACGCCCCAGAGAAGAACTCGAGGGCTCCCGAGTCCGTATCC
CAGGAGATCTCGTCCCAAACCAGCGCCGGCTCCTTCTGGCCCCTTGCGCCGGAAAGGAGCCGGCTCGTCGGTCAC
TTTTCCGACGACGTCCGCTCCTCGCTCTTCGCCGAGGCACAGCTTGTGCTGCTGACCTTTTGCACGGGAATTCAA
GACGTCACCACCTTTCTAGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCC
CTCATCATCTCCCAGATCGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCC
GCGGGATGGTTGACGGGCCAACTGAGCCACGTCATCGGTGGACGGAAGCGTTGGTGGCTGGTCTCGTGCAACCTC
CTTCAGACTGCCCTGGTCTTCACCGTAGCCGGGATCCAGTACCGCTACGGCAGCTCCGATCGCGGACCCGTTGCC
CTCGGCGTCATAGCCCTGTTGGCCTTTGCCGCGGGCGGGCAGGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAG
ATCAGCACCGCCATGGCGACGGCGGCTTGGGTTGACCTCGTCATGGACGGAAAGCTGTTTGTGCTGCACAACCGA
CCGAGGAATCGTCGCCTCGCCTTCCTGATCGCCCTGGCCGTCGGATCTCTGGTTGGCGCCGCCGTCTACCGCCAG
CTGGGCTCGGCGGCCGCCATTGCGATATCCGCGGCCGGAAAACTGCTCGTCACGATCCTCTTCCTGTTCTCGCCC
GCTGAGATCCGGCGACGGGGGGGGGCAGCAGAGGTGTAA
Gene >Ophcf2|00358
ATGTTCTGTCGCCTGCCTCTTCAGGCGGCAAATCACGCCCCAGAGAAGAACTCGAGGGCTCCCGAGTCCGTATCC
CAGGAGATCTCGTCCCAAACCAGCGCCGGCTCCTTCTGGCCCCTTGCGCCGGAAAGGAGCCGGCTCGTCGGTCAC
TTTTCCGACGACGTCCGCTCCTCGCTCTTCGCCGAGGCACAGCTTGTGCTGCTGACCTTTTGCACGGGAATTCAA
GGTGAAGAGGAGAGCTAGGCTTCGTGATAGTATGCGGAAGCTGACGCGGCCCAATGCCAGACGTCACCACCTTTC
TAGACTATCACTGCTTCGCCTCGAACCAGACCGGCAACACCGTCTTCCTCTGCATCGCCCTCATCATCTCCCAGA
TCGAGGGCGACACCTTCGTGACGGCCAACGTCGGCATGTCCCTCGGCGTCTTCCTGGCCGCGGGATGGTTGACGG
GCCAACTGAGCCACGTCATCGGTGGACGGAAGCGTTGGTGGCTGGTCTCGTGCAACCTCCTTCAGACTGCCCTGG
TCTTCACCGTAGCCGGGATCCAGTACCGCTACGGCAGCTCCGATCGCGGACCCGTTGCCCTCGGCGTCATAGCCC
TGTTGGCCTTTGCCGCGGGCGGGCAGGTGGTTCAGTCTCGCAGCCTGCGCATCACCGAGATCAGCACCGCCATGG
CGACGGCGGCTTGGGTTGACCTCGTCATGGACGGAAAGCTGTTTGTGCTGCACAACCGACCGAGGAATCGTCGCC
TCGCCTTCCTGATCGCCCTGGCCGTCGGATCTCTGGTTGGCGCCGCCGTCTACCGCCAGCTGGGCTCGGCGGCCG
CCATTGCGATATCCGCGGCCGGAAAACTGCTCGTCACGATCCTCTTCCTGTTCTCGCCCGCTGAGATCCGGCGAC
GGGGGGGGGCAGCAGAGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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