Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00318
Gene name
Locationscaffold_01:1466364..1466795
Strand-
Gene length (bp)431
Transcript length (bp)348
Coding sequence length (bp)348
Protein length (aa) 116

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02970 TBCA Tubulin binding cofactor A 5.1E-24 2 101

GO

GO Term Description Terminal node
GO:0007023 post-chaperonin tubulin folding pathway Yes
GO:0007021 tubulin complex assembly Yes
GO:0048487 beta-tubulin binding Yes
GO:0006457 protein folding No
GO:0043933 protein-containing complex organization No
GO:0071840 cellular component organization or biogenesis No
GO:0015631 tubulin binding No
GO:0065003 protein-containing complex assembly No
GO:0008150 biological_process No
GO:0022607 cellular component assembly No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0008092 cytoskeletal protein binding No
GO:0016043 cellular component organization No
GO:0005488 binding No
GO:0005515 protein binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5681 0.4327 0.0634 0.0923 0.33 0.0095 0.0826 0.1137 0.0931 0.0772

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3656
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1067
Ophiocordyceps australis map64 (Brazil) OphauB2|3943
Ophiocordyceps camponoti-floridani Ophcf2|00318 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3311
Ophiocordyceps kimflemingae Ophio5|1332
Ophiocordyceps subramaniannii Hirsu2|7067

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00318
MPPPSPLAITTSSVHRLLKEEASYHTELAEQRARVDALEAKAGNEDEDGNAAFLVKQQRTVVEQTRAVFVPLRLR
IDEAVAKLEEQVAAAEVQDGDLVAARAALEMAAKAKEERT*
Coding >Ophcf2|00318
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCGGTCCATCGTCTCCTGAAAGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTAGAGGCCAAAGCCGGTAACGAGGACGAGGATGGAAAC
GCGGCTTTTCTTGTCAAGCAGCAGCGGACGGTGGTTGAGCAGACGAGGGCTGTTTTCGTGCCGTTGAGGCTTCGT
ATTGACGAGGCGGTGGCTAAATTGGAGGAGCAGGTTGCTGCTGCGGAGGTTCAGGATGGGGATCTGGTTGCTGCT
AGGGCTGCGTTGGAGATGGCGGCCAAGGCCAAGGAGGAGAGGACTTGA
Transcript >Ophcf2|00318
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCGGTCCATCGTCTCCTGAAAGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTAGAGGCCAAAGCCGGTAACGAGGACGAGGATGGAAAC
GCGGCTTTTCTTGTCAAGCAGCAGCGGACGGTGGTTGAGCAGACGAGGGCTGTTTTCGTGCCGTTGAGGCTTCGT
ATTGACGAGGCGGTGGCTAAATTGGAGGAGCAGGTTGCTGCTGCGGAGGTTCAGGATGGGGATCTGGTTGCTGCT
AGGGCTGCGTTGGAGATGGCGGCCAAGGCCAAGGAGGAGAGGACTTGA
Gene >Ophcf2|00318
ATGCCGCCCCCCTCCCCGCTGGCCATCACCACCAGCTCGGTCCATCGTCTCCTGAAAGAAGAAGCCTCGTACCAC
ACCGAGCTGGCCGAGCAGCGAGCACGAGTCGACGCGCTAGAGGCCAAAGCCGGTAACGAGGACGAGGATGGAAAC
GCGGCTTTTCTTGTCAAGCAGCAGGTATAGCTATCCCCCCCCCCCCCCCCCCTTCCGGAGTTTTCGATCGAGGTT
CCGGGAACTGATGTGGTGGTGGTGGTTGTTAGCGGACGGTGGTTGAGCAGACGAGGGCTGTTTTCGTGCCGTTGA
GGCTTCGTATTGACGAGGCGGTGGCTAAATTGGAGGAGCAGGTTGCTGCTGCGGAGGTTCAGGATGGGGATCTGG
TTGCTGCTAGGGCTGCGTTGGAGATGGCGGCCAAGGCCAAGGAGGAGAGGACTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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