Protein ID | Ophcf2|00301 |
Gene name | |
Location | scaffold_01:1417307..1419344 |
Strand | + |
Gene length (bp) | 2037 |
Transcript length (bp) | 1755 |
Coding sequence length (bp) | 1755 |
Protein length (aa) | 585 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00328 | His_Phos_2 | Histidine phosphatase superfamily (branch 2) | 6.4E-43 | 167 | 522 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 33 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 46 | 68 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 197.24 | 100.58 | 293.89 |
Alive | In ants, during behavior modification | 111.12 | 61.01 | 161.23 |
Dead | In ants, recently dead | 120.68 | 65.77 | 175.60 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.002793 | yes |
Alive | Dead | 0.681907 | no |
Dead | Fungus | 0.015811 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00301 MSQSNNVIKQGSVDYEPVHQDEEDPHSDRPAPLRRSSEAELRHLRFAVYLLAPCLAILAAFNIFQFWPSFESDGC SHKRSKVPQYFQTSPELWAGPTATGKPPFLAETISWAPTQTYVPNEPLETSVPVEGMAPGDENIFHLMGHLSPYK AAPGFGVEEYPLPEGAEIMQVQMLSRHGSRYPGTDSEVEQLAHRLGNASSSEFNTKGPLAFLKDWKYQLGLEILV SNGRKELFNSGILHSYMYGAMYNTGSKIIARTTTQDRMLKSAENWLAGFFGLDWTKNATIEVIIDDTGFNNSLSG ANNCPNAIPQTVGKAAAAVWMDKYLQNAVARFQNMTEGFNWTIQDVYAAQTMCPYETVALGSSKFCDLFTYEEWK GYNYAVNLYFAGAAAFNSPTGRAMGLGYQQEMVARLQNHTLGYSGSQINVTLDNNTETFPLNQTLYFDFSHDTTI VAALTAMGLVQFNESLPDTGPPPEQGWFVVSNMVPFGSRFDLEVIRTPKPVSAARDGYVEGGETRYVHLVLNQRT VPLGKSFPECDAERKDGWCELGVFLKIQESMPAKAKFDYACFGHYPPVSYGEVKDGAPP* |
Coding | >Ophcf2|00301 ATGAGCCAGTCCAACAACGTCATCAAGCAGGGCTCCGTCGACTACGAGCCCGTCCATCAAGATGAGGAGGATCCT CACTCGGACCGACCCGCCCCCCTGAGGAGGAGCTCCGAGGCGGAATTGCGCCATCTCAGATTCGCCGTCTACCTG CTGGCCCCGTGCTTGGCCATCCTGGCCGCCTTCAACATCTTCCAGTTCTGGCCTTCATTCGAGTCGGATGGATGC TCTCACAAGCGGTCCAAGGTGCCGCAGTACTTTCAGACGTCGCCAGAGCTATGGGCCGGACCGACGGCCACCGGC AAGCCGCCCTTCTTGGCTGAAACCATCTCGTGGGCACCGACCCAGACCTACGTGCCCAACGAGCCGCTGGAGACG TCGGTTCCCGTTGAGGGCATGGCACCCGGAGACGAGAACATCTTCCATCTCATGGGTCACTTGTCGCCGTATAAG GCCGCGCCCGGCTTCGGCGTCGAAGAGTACCCTCTGCCCGAAGGTGCCGAAATCATGCAGGTTCAGATGCTCTCT CGTCACGGATCCCGCTACCCCGGTACCGACTCCGAGGTCGAGCAGCTCGCCCACCGCCTAGGCAATGCTTCATCA TCCGAATTCAATACAAAGGGCCCTCTAGCCTTTCTCAAAGACTGGAAGTACCAGCTCGGGCTCGAGATCCTCGTG TCCAATGGCCGCAAGGAGCTCTTCAACTCGGGCATCTTGCACAGTTACATGTACGGGGCCATGTACAACACTGGT AGCAAGATTATTGCTCGCACCACGACGCAAGATCGAATGCTCAAGTCGGCCGAGAACTGGCTGGCCGGCTTCTTC GGCCTCGACTGGACCAAGAACGCCACCATCGAAGTCATCATTGATGACACCGGCTTCAACAACTCGCTCTCGGGC GCCAACAATTGCCCCAATGCGATACCCCAGACGGTCGGCAAGGCTGCTGCGGCCGTCTGGATGGATAAGTATCTT CAGAACGCCGTCGCTCGCTTCCAGAACATGACCGAGGGTTTCAACTGGACTATCCAAGACGTCTACGCTGCCCAG ACGATGTGCCCTTATGAGACTGTCGCCCTCGGATCCAGCAAGTTCTGCGACTTGTTTACATACGAAGAATGGAAG GGCTACAACTACGCCGTCAACCTGTACTTTGCCGGAGCGGCGGCTTTCAATAGTCCCACGGGTCGCGCCATGGGA CTCGGCTATCAGCAGGAGATGGTGGCGCGGCTACAGAACCATACGCTCGGCTATTCCGGCTCGCAGATCAACGTG ACGCTCGACAACAACACCGAGACCTTTCCGCTGAACCAGACGCTTTACTTTGACTTTTCCCACGACACCACCATC GTCGCCGCCTTGACGGCCATGGGCCTCGTCCAGTTCAACGAGTCTCTTCCGGACACGGGCCCTCCTCCGGAGCAG GGGTGGTTCGTAGTGTCCAACATGGTCCCATTCGGCTCCCGCTTCGACCTCGAGGTCATCAGGACGCCAAAGCCC GTCTCTGCCGCCCGAGACGGCTACGTGGAAGGCGGCGAGACGCGTTACGTTCACCTGGTACTGAACCAGCGCACC GTGCCCCTGGGCAAGAGCTTCCCCGAGTGCGACGCCGAACGCAAGGACGGCTGGTGCGAGCTGGGCGTCTTCCTC AAGATCCAGGAGAGCATGCCGGCCAAGGCCAAGTTCGACTATGCCTGCTTCGGCCACTATCCACCCGTCTCGTAC GGAGAGGTCAAAGACGGTGCTCCGCCGTGA |
Transcript | >Ophcf2|00301 ATGAGCCAGTCCAACAACGTCATCAAGCAGGGCTCCGTCGACTACGAGCCCGTCCATCAAGATGAGGAGGATCCT CACTCGGACCGACCCGCCCCCCTGAGGAGGAGCTCCGAGGCGGAATTGCGCCATCTCAGATTCGCCGTCTACCTG CTGGCCCCGTGCTTGGCCATCCTGGCCGCCTTCAACATCTTCCAGTTCTGGCCTTCATTCGAGTCGGATGGATGC TCTCACAAGCGGTCCAAGGTGCCGCAGTACTTTCAGACGTCGCCAGAGCTATGGGCCGGACCGACGGCCACCGGC AAGCCGCCCTTCTTGGCTGAAACCATCTCGTGGGCACCGACCCAGACCTACGTGCCCAACGAGCCGCTGGAGACG TCGGTTCCCGTTGAGGGCATGGCACCCGGAGACGAGAACATCTTCCATCTCATGGGTCACTTGTCGCCGTATAAG GCCGCGCCCGGCTTCGGCGTCGAAGAGTACCCTCTGCCCGAAGGTGCCGAAATCATGCAGGTTCAGATGCTCTCT CGTCACGGATCCCGCTACCCCGGTACCGACTCCGAGGTCGAGCAGCTCGCCCACCGCCTAGGCAATGCTTCATCA TCCGAATTCAATACAAAGGGCCCTCTAGCCTTTCTCAAAGACTGGAAGTACCAGCTCGGGCTCGAGATCCTCGTG TCCAATGGCCGCAAGGAGCTCTTCAACTCGGGCATCTTGCACAGTTACATGTACGGGGCCATGTACAACACTGGT AGCAAGATTATTGCTCGCACCACGACGCAAGATCGAATGCTCAAGTCGGCCGAGAACTGGCTGGCCGGCTTCTTC GGCCTCGACTGGACCAAGAACGCCACCATCGAAGTCATCATTGATGACACCGGCTTCAACAACTCGCTCTCGGGC GCCAACAATTGCCCCAATGCGATACCCCAGACGGTCGGCAAGGCTGCTGCGGCCGTCTGGATGGATAAGTATCTT CAGAACGCCGTCGCTCGCTTCCAGAACATGACCGAGGGTTTCAACTGGACTATCCAAGACGTCTACGCTGCCCAG ACGATGTGCCCTTATGAGACTGTCGCCCTCGGATCCAGCAAGTTCTGCGACTTGTTTACATACGAAGAATGGAAG GGCTACAACTACGCCGTCAACCTGTACTTTGCCGGAGCGGCGGCTTTCAATAGTCCCACGGGTCGCGCCATGGGA CTCGGCTATCAGCAGGAGATGGTGGCGCGGCTACAGAACCATACGCTCGGCTATTCCGGCTCGCAGATCAACGTG ACGCTCGACAACAACACCGAGACCTTTCCGCTGAACCAGACGCTTTACTTTGACTTTTCCCACGACACCACCATC GTCGCCGCCTTGACGGCCATGGGCCTCGTCCAGTTCAACGAGTCTCTTCCGGACACGGGCCCTCCTCCGGAGCAG GGGTGGTTCGTAGTGTCCAACATGGTCCCATTCGGCTCCCGCTTCGACCTCGAGGTCATCAGGACGCCAAAGCCC GTCTCTGCCGCCCGAGACGGCTACGTGGAAGGCGGCGAGACGCGTTACGTTCACCTGGTACTGAACCAGCGCACC GTGCCCCTGGGCAAGAGCTTCCCCGAGTGCGACGCCGAACGCAAGGACGGCTGGTGCGAGCTGGGCGTCTTCCTC AAGATCCAGGAGAGCATGCCGGCCAAGGCCAAGTTCGACTATGCCTGCTTCGGCCACTATCCACCCGTCTCGTAC GGAGAGGTCAAAGACGGTGCTCCGCCGTGA |
Gene | >Ophcf2|00301 ATGAGCCAGTCCAACAACGTCATCAAGCAGGGCTCCGTCGACTACGAGCCCGTCCATCAAGATGAGGAGGATCCT CACTCGGACCGACCCGCCCCCCTGAGGAGGAGCTCCGAGGCGGAATTGCGCCATCTCAGATTCGCCGTCTACCTG CTGGCCCCGTGCTTGGCCATCCTGGCCGCCTTCAACATCTTCCAGTTCTGGCCTTCATTCGAGTCGGATGGATGC TCTCACAAGCGGTCCAAGGTGCCGCAGTACTTTCAGACGTCGCCAGAGCTATGGGCCGGACCGACGGCCACCGGC AAGCCGCCCTTCTTGGCTGAAACCATCTCGTGGGCACCGACCCAGACCTACGTGCCCAACGAGCCGCTGGAGACG TCGGTTCCCGTTGAGGGCATGGCACCCGGAGACGAGAACATCTTCCATCTCATGGGTCACTTGTCGCCGTATAAG GCCGCGCCCGGCTTCGGCGTCGAAGAGTACCCTCTGCCCGAAGGTGCCGAAATCATGCAGGTTCAGATGCTCTCT CGTCACGGATCCCGCTACCCCGGTACCGACTCCGAGGTCGAGCAGCTCGCCCACCGCCTAGGCAATGCTTCATCA TCCGAATTCAATACAAAGGGCCCTCTAGCCTTTCTCAAAGACTGGAAGTACCAGCTCGGGCTCGAGATCCTCGTG TCCAATGGCCGCAAGGAGCTCTTCAACTCGGGTTCGTCCGTCAGCTCCCCGTGTGTTTGCTAGCAGTCGGCTAAC GAGGGCCAGGCATCTTGCACAGTTACATGTACGGGGCCATGTACAACACTGGTAGCAAGATTATTGCTCGCACCA CGGCAAGTCATGCATAGAAACTCGACCTCTGCGGCTGGCTTGCTGACCTCTTCCATAGACGCAAGATCGAATGCT CAAGTCGGCCGAGAACTGGCTGGCCGGCTTCTTCGGCCTCGACTGGTCCGTGACCCGTGTCCGTGTCAATTCCTT TCTCACATTGTCTCGCGCAGGACCAAGAACGCCACCATCGAAGTCATCATTGATGACACCGGCTTCAACAACTCG CTCTCGGGCGCCAACAATTGCCCCAATGCGATACCCCAGACGGTCGGCAAGGCTGCTGCGGCCGTCTGGATGGAT AAGTATCTTCAGAACGGTCCGCCATCCCTGCCCGATAGATTACGCCGTGGTGATGTTTGGAGCTGACGTCGATCA GCCGTCGCTCGCTTCCAGAACATGACCGAGGGTTTCAACTGGACTATCCAAGACGTCTACGCTGCCCAGACGATG TGCCCTTATGAGACTGTCGCCCTCGGATCCAGCAAGTTCTGCGACTTGTTTACATACGAAGAATGGAAGGGCTAC AACTACGCCGTCAACCTGTACTTTGCCGGAGCGGCGGCTTTCAATAGTCCCACGGGTGTGAGTCTTTTTGTCTGA TGGTCGTTTGGACTTTGACTTACGTGATGTGATGACTTCCACCAGCGCGCCATGGGACTCGGCTATCAGCAGGAG ATGGTGGCGCGGCTACAGAACCATACGCTCGGCTATTCCGGCTCGCAGATCAACGTGACGCTCGACAACAACACC GAGACCTTTCCGCTGAACCAGACGCTTTACTTTGACTTTTCCCACGACACCACCATCGTCGCCGCCTTGACGGCC ATGGGCCTCGTCCAGTTCAACGAGTCTCTTCCGGACACGGGCCCTCCTCCGGAGCAGGGGTGGTTCGTAGTGTCC AACATGGTCCCATTCGGCTCCCGCTTCGACCTCGAGGTCATCAGGACGCCAAAGCCCGTCTCTGCCGCCCGAGAC GGCTACGTGGAAGGCGGCGAGACGCGTTACGTTCACCTGGTACTGAACCAGCGCACCGTGCCCCTGGGCAAGAGC TTCCCCGAGTGCGACGCCGAACGCAAGGACGGCTGGTGCGAGCTGGGCGTCTTCCTCAAGATCCAGGAGAGCATG CCGGCCAAGGCCAAGTTCGACTATGCCTGCTTCGGCCACTATCCACCCGTCTCGTACGGAGAGGTCAAAGACGGT GCTCCGCCGTGA |