Protein ID | Ophcf2|00290 |
Gene name | |
Location | scaffold_01:1388945..1390955 |
Strand | + |
Gene length (bp) | 2010 |
Transcript length (bp) | 2010 |
Coding sequence length (bp) | 2010 |
Protein length (aa) | 670 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 374 | 396 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 88.15 | 49.03 | 127.27 |
Alive | In ants, during behavior modification | 315.82 | 128.56 | 503.08 |
Dead | In ants, recently dead | 446.69 | 183.55 | 709.83 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.116877 | no |
Dead | Fungus | 0.000238 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00290 MSIPEPPASLDDACFAIHNGTLFAYSSHGFFSLVLDKGAAWRKLDMGVPVEGAPCLSTTPLDASQAALFVVGGRT DSGDYPGLQRYTYDDGQWSTIRLTDEVTKQRLGHAVTYVASDDVILMYAGHQDGTNGLSSQTFAIQSSHPFTVRG YESVAPPADSPVLFAWSASDAGMLTGGNGPLDDRPWLWNPSSGWRSWETTISAPFKVTPLTRLVPVDGDDGSKFL YAFDFGQSPVAVSVMVLQDGAGNPGPSTPSDVSRRVAVSRRDLGSKSLPVYNATLAPAGRKRLPAVASDGNGTVV FAGGGQDGALLVFNGKKNTWVDVGAMLGDGSKAFLAPTSASPTETPSSTSTSGASTSTTAAGNRGRTGPGPNALL GITLGCILGLMALLGIVLFLLRRRKKLRRRKAADDDSEEKEAEDMSPSTIPPKSHFRGHHPQASHESYSSMAILM GRVGKDRGLTRKTSHDTNRSSDSSLHKKFKSTISKPIPQPAAYPVLPGPYDDDKNASLAPKAAAAVAAAAAAAES NDTTRRSSGWNRYWSGGSALQILGLGPTRRNTTMSERSSHYSDSGNRMRQDSATVPPLTMDGRPEVNSVAVNSPT VARLATAEGMAGRIVRPTSPASSGYSSGIPESVVDGWDTASGGGRGGHRRAGSTARATTRPRAGPFLRG* |
Coding | >Ophcf2|00290 ATGTCCATCCCGGAGCCTCCGGCTTCGTTGGACGACGCATGCTTCGCAATACACAACGGCACCCTGTTTGCCTAC TCGTCTCATGGCTTCTTTTCCTTAGTACTCGACAAGGGCGCCGCCTGGCGGAAGCTCGACATGGGCGTCCCCGTC GAGGGCGCCCCCTGTCTGAGCACGACGCCTCTCGACGCCAGCCAGGCCGCCTTGTTCGTCGTCGGCGGCCGTACA GACTCGGGCGACTACCCGGGCCTGCAAAGATATACATACGATGACGGCCAGTGGTCTACCATCCGCCTCACCGAC GAGGTCACCAAGCAACGACTGGGTCACGCCGTAACCTACGTCGCCTCTGACGATGTCATTCTCATGTACGCCGGT CATCAGGATGGCACCAATGGCCTCTCCTCTCAGACCTTTGCCATTCAGTCCTCCCATCCCTTTACCGTCCGCGGA TACGAATCCGTCGCGCCCCCGGCCGACTCACCTGTTCTCTTTGCTTGGTCCGCCTCCGACGCTGGCATGCTCACG GGAGGCAACGGTCCGCTCGACGATCGTCCCTGGCTATGGAACCCTTCATCCGGCTGGAGAAGCTGGGAGACGACA ATATCGGCTCCTTTCAAGGTGACGCCGCTCACGCGCCTCGTCCCGGTCGATGGCGACGACGGGTCCAAGTTCCTC TACGCCTTCGATTTTGGCCAATCTCCTGTAGCCGTCAGCGTCATGGTCCTGCAGGACGGCGCGGGTAACCCGGGC CCCAGCACGCCCTCGGATGTCAGCAGGAGGGTCGCTGTTTCCAGACGCGACTTGGGCTCCAAGAGCTTGCCGGTC TACAACGCGACCCTGGCACCCGCGGGCCGGAAACGTCTGCCCGCCGTGGCCTCGGATGGCAACGGCACCGTCGTC TTCGCGGGCGGTGGCCAGGACGGCGCGTTGCTCGTGTTCAACGGCAAGAAGAATACCTGGGTCGACGTCGGAGCC ATGCTCGGCGACGGCAGCAAGGCTTTCCTGGCGCCGACGAGCGCGTCGCCCACGGAGACGCCCTCGAGCACGAGC ACGTCGGGAGCGTCTACGTCGACGACGGCAGCCGGCAACCGGGGCAGGACCGGACCCGGGCCCAATGCCTTGCTG GGCATCACCCTGGGCTGCATCCTCGGTCTGATGGCCCTCCTCGGTATCGTCCTTTTTCTCCTCCGGCGGCGCAAG AAGCTCCGCAGACGCAAGGCGGCCGACGACGATTCGGAGGAGAAGGAAGCCGAGGACATGTCACCCAGCACGATA CCTCCCAAGTCTCATTTCCGCGGTCATCACCCGCAAGCGTCTCACGAGTCCTATTCGTCCATGGCCATTCTGATG GGTCGAGTCGGCAAGGATAGGGGCCTGACGCGCAAGACGAGCCACGACACGAACCGGAGCTCGGACAGCTCGCTG CACAAGAAGTTCAAGAGCACCATCAGCAAGCCGATACCACAGCCGGCGGCCTACCCGGTGCTGCCGGGCCCATAT GACGATGACAAGAACGCGAGCCTGGCGCCCAAGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCGAATCA AATGACACGACGCGGAGGAGCTCCGGCTGGAACCGTTATTGGTCCGGGGGAAGCGCCCTTCAGATCCTGGGTCTG GGGCCGACGCGGAGGAACACGACGATGTCGGAGCGGAGCTCGCACTACTCGGACAGCGGCAACCGGATGCGGCAG GACTCGGCCACAGTACCGCCGCTGACGATGGACGGACGGCCAGAGGTCAACAGCGTGGCGGTCAACAGCCCGACT GTGGCGCGGCTGGCGACGGCGGAGGGCATGGCGGGCCGGATCGTGCGGCCGACGTCTCCGGCGTCTTCGGGCTAC TCGAGCGGCATCCCGGAGAGCGTCGTCGACGGCTGGGACACGGCTTCGGGCGGCGGTCGGGGTGGACATCGCCGG GCGGGGTCCACGGCTCGAGCTACTACGCGGCCTCGGGCCGGGCCGTTCCTTCGGGGATGA |
Transcript | >Ophcf2|00290 ATGTCCATCCCGGAGCCTCCGGCTTCGTTGGACGACGCATGCTTCGCAATACACAACGGCACCCTGTTTGCCTAC TCGTCTCATGGCTTCTTTTCCTTAGTACTCGACAAGGGCGCCGCCTGGCGGAAGCTCGACATGGGCGTCCCCGTC GAGGGCGCCCCCTGTCTGAGCACGACGCCTCTCGACGCCAGCCAGGCCGCCTTGTTCGTCGTCGGCGGCCGTACA GACTCGGGCGACTACCCGGGCCTGCAAAGATATACATACGATGACGGCCAGTGGTCTACCATCCGCCTCACCGAC GAGGTCACCAAGCAACGACTGGGTCACGCCGTAACCTACGTCGCCTCTGACGATGTCATTCTCATGTACGCCGGT CATCAGGATGGCACCAATGGCCTCTCCTCTCAGACCTTTGCCATTCAGTCCTCCCATCCCTTTACCGTCCGCGGA TACGAATCCGTCGCGCCCCCGGCCGACTCACCTGTTCTCTTTGCTTGGTCCGCCTCCGACGCTGGCATGCTCACG GGAGGCAACGGTCCGCTCGACGATCGTCCCTGGCTATGGAACCCTTCATCCGGCTGGAGAAGCTGGGAGACGACA ATATCGGCTCCTTTCAAGGTGACGCCGCTCACGCGCCTCGTCCCGGTCGATGGCGACGACGGGTCCAAGTTCCTC TACGCCTTCGATTTTGGCCAATCTCCTGTAGCCGTCAGCGTCATGGTCCTGCAGGACGGCGCGGGTAACCCGGGC CCCAGCACGCCCTCGGATGTCAGCAGGAGGGTCGCTGTTTCCAGACGCGACTTGGGCTCCAAGAGCTTGCCGGTC TACAACGCGACCCTGGCACCCGCGGGCCGGAAACGTCTGCCCGCCGTGGCCTCGGATGGCAACGGCACCGTCGTC TTCGCGGGCGGTGGCCAGGACGGCGCGTTGCTCGTGTTCAACGGCAAGAAGAATACCTGGGTCGACGTCGGAGCC ATGCTCGGCGACGGCAGCAAGGCTTTCCTGGCGCCGACGAGCGCGTCGCCCACGGAGACGCCCTCGAGCACGAGC ACGTCGGGAGCGTCTACGTCGACGACGGCAGCCGGCAACCGGGGCAGGACCGGACCCGGGCCCAATGCCTTGCTG GGCATCACCCTGGGCTGCATCCTCGGTCTGATGGCCCTCCTCGGTATCGTCCTTTTTCTCCTCCGGCGGCGCAAG AAGCTCCGCAGACGCAAGGCGGCCGACGACGATTCGGAGGAGAAGGAAGCCGAGGACATGTCACCCAGCACGATA CCTCCCAAGTCTCATTTCCGCGGTCATCACCCGCAAGCGTCTCACGAGTCCTATTCGTCCATGGCCATTCTGATG GGTCGAGTCGGCAAGGATAGGGGCCTGACGCGCAAGACGAGCCACGACACGAACCGGAGCTCGGACAGCTCGCTG CACAAGAAGTTCAAGAGCACCATCAGCAAGCCGATACCACAGCCGGCGGCCTACCCGGTGCTGCCGGGCCCATAT GACGATGACAAGAACGCGAGCCTGGCGCCCAAGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCGAATCA AATGACACGACGCGGAGGAGCTCCGGCTGGAACCGTTATTGGTCCGGGGGAAGCGCCCTTCAGATCCTGGGTCTG GGGCCGACGCGGAGGAACACGACGATGTCGGAGCGGAGCTCGCACTACTCGGACAGCGGCAACCGGATGCGGCAG GACTCGGCCACAGTACCGCCGCTGACGATGGACGGACGGCCAGAGGTCAACAGCGTGGCGGTCAACAGCCCGACT GTGGCGCGGCTGGCGACGGCGGAGGGCATGGCGGGCCGGATCGTGCGGCCGACGTCTCCGGCGTCTTCGGGCTAC TCGAGCGGCATCCCGGAGAGCGTCGTCGACGGCTGGGACACGGCTTCGGGCGGCGGTCGGGGTGGACATCGCCGG GCGGGGTCCACGGCTCGAGCTACTACGCGGCCTCGGGCCGGGCCGTTCCTTCGGGGATGA |
Gene | >Ophcf2|00290 ATGTCCATCCCGGAGCCTCCGGCTTCGTTGGACGACGCATGCTTCGCAATACACAACGGCACCCTGTTTGCCTAC TCGTCTCATGGCTTCTTTTCCTTAGTACTCGACAAGGGCGCCGCCTGGCGGAAGCTCGACATGGGCGTCCCCGTC GAGGGCGCCCCCTGTCTGAGCACGACGCCTCTCGACGCCAGCCAGGCCGCCTTGTTCGTCGTCGGCGGCCGTACA GACTCGGGCGACTACCCGGGCCTGCAAAGATATACATACGATGACGGCCAGTGGTCTACCATCCGCCTCACCGAC GAGGTCACCAAGCAACGACTGGGTCACGCCGTAACCTACGTCGCCTCTGACGATGTCATTCTCATGTACGCCGGT CATCAGGATGGCACCAATGGCCTCTCCTCTCAGACCTTTGCCATTCAGTCCTCCCATCCCTTTACCGTCCGCGGA TACGAATCCGTCGCGCCCCCGGCCGACTCACCTGTTCTCTTTGCTTGGTCCGCCTCCGACGCTGGCATGCTCACG GGAGGCAACGGTCCGCTCGACGATCGTCCCTGGCTATGGAACCCTTCATCCGGCTGGAGAAGCTGGGAGACGACA ATATCGGCTCCTTTCAAGGTGACGCCGCTCACGCGCCTCGTCCCGGTCGATGGCGACGACGGGTCCAAGTTCCTC TACGCCTTCGATTTTGGCCAATCTCCTGTAGCCGTCAGCGTCATGGTCCTGCAGGACGGCGCGGGTAACCCGGGC CCCAGCACGCCCTCGGATGTCAGCAGGAGGGTCGCTGTTTCCAGACGCGACTTGGGCTCCAAGAGCTTGCCGGTC TACAACGCGACCCTGGCACCCGCGGGCCGGAAACGTCTGCCCGCCGTGGCCTCGGATGGCAACGGCACCGTCGTC TTCGCGGGCGGTGGCCAGGACGGCGCGTTGCTCGTGTTCAACGGCAAGAAGAATACCTGGGTCGACGTCGGAGCC ATGCTCGGCGACGGCAGCAAGGCTTTCCTGGCGCCGACGAGCGCGTCGCCCACGGAGACGCCCTCGAGCACGAGC ACGTCGGGAGCGTCTACGTCGACGACGGCAGCCGGCAACCGGGGCAGGACCGGACCCGGGCCCAATGCCTTGCTG GGCATCACCCTGGGCTGCATCCTCGGTCTGATGGCCCTCCTCGGTATCGTCCTTTTTCTCCTCCGGCGGCGCAAG AAGCTCCGCAGACGCAAGGCGGCCGACGACGATTCGGAGGAGAAGGAAGCCGAGGACATGTCACCCAGCACGATA CCTCCCAAGTCTCATTTCCGCGGTCATCACCCGCAAGCGTCTCACGAGTCCTATTCGTCCATGGCCATTCTGATG GGTCGAGTCGGCAAGGATAGGGGCCTGACGCGCAAGACGAGCCACGACACGAACCGGAGCTCGGACAGCTCGCTG CACAAGAAGTTCAAGAGCACCATCAGCAAGCCGATACCACAGCCGGCGGCCTACCCGGTGCTGCCGGGCCCATAT GACGATGACAAGAACGCGAGCCTGGCGCCCAAGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCCGAATCA AATGACACGACGCGGAGGAGCTCCGGCTGGAACCGTTATTGGTCCGGGGGAAGCGCCCTTCAGATCCTGGGTCTG GGGCCGACGCGGAGGAACACGACGATGTCGGAGCGGAGCTCGCACTACTCGGACAGCGGCAACCGGATGCGGCAG GACTCGGCCACAGTACCGCCGCTGACGATGGACGGACGGCCAGAGGTCAACAGCGTGGCGGTCAACAGCCCGACT GTGGCGCGGCTGGCGACGGCGGAGGGCATGGCGGGCCGGATCGTGCGGCCGACGTCTCCGGCGTCTTCGGGCTAC TCGAGCGGCATCCCGGAGAGCGTCGTCGACGGCTGGGACACGGCTTCGGGCGGCGGTCGGGGTGGACATCGCCGG GCGGGGTCCACGGCTCGAGCTACTACGCGGCCTCGGGCCGGGCCGTTCCTTCGGGGATGA |